Definition | Staphylococcus aureus subsp. aureus COL chromosome, complete genome. |
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Accession | NC_002951 |
Length | 2,809,422 |
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The map label for this gene is ymaB [H]
Identifier: 57650549
GI number: 57650549
Start: 1755659
End: 1756267
Strand: Reverse
Name: ymaB [H]
Synonym: SACOL1724
Alternate gene names: 57650549
Gene position: 1756267-1755659 (Counterclockwise)
Preceding gene: 57650550
Following gene: 57650548
Centisome position: 62.51
GC content: 33.17
Gene sequence:
>609_bases ATGTCTAAATTTGATGAACAAATCATTGTAGTACCTAGAGAAATTATTTTTAATAATGAAAAGAATACTTTCAATGGGTT TTTAAATAAGAATAAACCAGAAGGTCAAAATATTTTTGATGCGCTAAGTCAATATGAAGTTAAGCGACGCGGCGATATGG AAGAGGATCCATCATATAAACAACTCATTTCTTATTGTTTACTTGAAAATGAGCATGGCGAGATATTAGTGTATGAACGA TTATCTGGCGGTGGAGAAGCTCGATTGCATGGACAATCTTCAATAGGTGTAGGCGGTCATATGAATGATGTTCCAGGAGC AGAATCTATTAACGAAGTATTGAGAGTTAATGCACAGAGAGAATTAGAAGAAGAAGTAGGTTTAAGTGAGCAAGATTCAC AAAATATGGAATATATCGGTTTTATTAATGACGATAATAATGAAGTGGGCAAGGTACATATTGGTGTTGTATTTAAAATC ACTGTAAGTACGAATGATGTAGAAGCTAAAGAAACAGATACTTTACGAATAAAATGGGTTGAAAAAGGCAACATAGAGTC ATATGATGATTTCGAAACGTGGAGTGCATTAATCCTTCAAGATTTATAA
Upstream 100 bases:
>100_bases ATTTTTTAAATAGCAAAATGCCACATTTAATCGCTAAAATATGACATATTTGCTAAAATGCATTTAAGAGAACAAACATT AAAGTGAGGAGTTTTATACG
Downstream 100 bases:
>100_bases TCAAACGAGGTGACATATATGTCAGATATTATTCAGTTTCCTAACTCTTCGAAAAAGTTATATAAAGATATAAAACGTGC TGAACAAGACCAAAACTATG
Product: MutT/nudix family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MSKFDEQIIVVPREIIFNNEKNTFNGFLNKNKPEGQNIFDALSQYEVKRRGDMEEDPSYKQLISYCLLENEHGEILVYER LSGGGEARLHGQSSIGVGGHMNDVPGAESINEVLRVNAQRELEEEVGLSEQDSQNMEYIGFINDDNNEVGKVHIGVVFKI TVSTNDVEAKETDTLRIKWVEKGNIESYDDFETWSALILQDL
Sequences:
>Translated_202_residues MSKFDEQIIVVPREIIFNNEKNTFNGFLNKNKPEGQNIFDALSQYEVKRRGDMEEDPSYKQLISYCLLENEHGEILVYER LSGGGEARLHGQSSIGVGGHMNDVPGAESINEVLRVNAQRELEEEVGLSEQDSQNMEYIGFINDDNNEVGKVHIGVVFKI TVSTNDVEAKETDTLRIKWVEKGNIESYDDFETWSALILQDL >Mature_201_residues SKFDEQIIVVPREIIFNNEKNTFNGFLNKNKPEGQNIFDALSQYEVKRRGDMEEDPSYKQLISYCLLENEHGEILVYERL SGGGEARLHGQSSIGVGGHMNDVPGAESINEVLRVNAQRELEEEVGLSEQDSQNMEYIGFINDDNNEVGKVHIGVVFKIT VSTNDVEAKETDTLRIKWVEKGNIESYDDFETWSALILQDL
Specific function: Unknown
COG id: COG4112
COG function: function code R; Predicted phosphoesterase (MutT family)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000086 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22947; Mature: 22816
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFDEQIIVVPREIIFNNEKNTFNGFLNKNKPEGQNIFDALSQYEVKRRGDMEEDPSYK CCCCCCEEEEECHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHH QLISYCLLENEHGEILVYERLSGGGEARLHGQSSIGVGGHMNDVPGAESINEVLRVNAQR HHHHHHHHCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHH ELEEEVGLSEQDSQNMEYIGFINDDNNEVGKVHIGVVFKITVSTNDVEAKETDTLRIKWV HHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEE EKGNIESYDDFETWSALILQDL ECCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure SKFDEQIIVVPREIIFNNEKNTFNGFLNKNKPEGQNIFDALSQYEVKRRGDMEEDPSYK CCCCCEEEEECHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHH QLISYCLLENEHGEILVYERLSGGGEARLHGQSSIGVGGHMNDVPGAESINEVLRVNAQR HHHHHHHHCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHH ELEEEVGLSEQDSQNMEYIGFINDDNNEVGKVHIGVVFKITVSTNDVEAKETDTLRIKWV HHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEE EKGNIESYDDFETWSALILQDL ECCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 8407798 [H]