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The map label for this gene is ydbP [H]

Identifier: 57650149

GI number: 57650149

Start: 896714

End: 897034

Strand: Reverse

Name: ydbP [H]

Synonym: SACOL0875

Alternate gene names: 57650149

Gene position: 897034-896714 (Counterclockwise)

Preceding gene: 57650158

Following gene: 57650146

Centisome position: 31.93

GC content: 33.33

Gene sequence:

>321_bases
ATGCAATCAATCAAAAGTAATGAATCATTTAAATCTGTAATTAATAGCGATACACCTGTAATTGTTAAATTTGAGGCAGG
ATGGTGCCCAGACTGTCGTGCTATGGATTTATGGATTGACCCAATCGTAGAACAATATAATGATTACCAATGGTATACTG
TTAATCGTGATGAATTAGAAGATGTAGTTGTTGAAAATGAAGTTATGGGTATCCCTAGCTTGCTAGTATTTAAAAACGGC
GATAAAATTGCACACCTTCATTCAGCAAATGCTAAGTCACCTGAACAAGTTGAATCATTTTTAGCAGAAACTTTTAAATA
A

Upstream 100 bases:

>100_bases
TTCCAAAGCAAAAGGCTTTCATTTTGAAGCTAAAATTTTTTATTATGATATAAATTTAGCTATAATAAAAATTATTAAAC
TATCTAGAGGAGTTGTTACA

Downstream 100 bases:

>100_bases
ATACTAAAATAAAAATGTGTATATACTGCACAATAAAAAGCTGAGACTGTTATTGTACCGACTCTAGTAAGTTAGATTAA
ATCTCTAACTCGATAGATGT

Product: thioredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MQSIKSNESFKSVINSDTPVIVKFEAGWCPDCRAMDLWIDPIVEQYNDYQWYTVNRDELEDVVVENEVMGIPSLLVFKNG
DKIAHLHSANAKSPEQVESFLAETFK

Sequences:

>Translated_106_residues
MQSIKSNESFKSVINSDTPVIVKFEAGWCPDCRAMDLWIDPIVEQYNDYQWYTVNRDELEDVVVENEVMGIPSLLVFKNG
DKIAHLHSANAKSPEQVESFLAETFK
>Mature_106_residues
MQSIKSNESFKSVINSDTPVIVKFEAGWCPDCRAMDLWIDPIVEQYNDYQWYTVNRDELEDVVVENEVMGIPSLLVFKNG
DKIAHLHSANAKSPEQVESFLAETFK

Specific function: Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323072, Length=92, Percent_Identity=39.1304347826087, Blast_Score=73, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6321648, Length=94, Percent_Identity=32.9787234042553, Blast_Score=63, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: 1.8.1.8 [C]

Molecular weight: Translated: 12141; Mature: 12141

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSIKSNESFKSVINSDTPVIVKFEAGWCPDCRAMDLWIDPIVEQYNDYQWYTVNRDELE
CCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHCCCCEEEECCHHHHH
DVVVENEVMGIPSLLVFKNGDKIAHLHSANAKSPEQVESFLAETFK
HHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MQSIKSNESFKSVINSDTPVIVKFEAGWCPDCRAMDLWIDPIVEQYNDYQWYTVNRDELE
CCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHCCCCEEEECCHHHHH
DVVVENEVMGIPSLLVFKNGDKIAHLHSANAKSPEQVESFLAETFK
HHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]