| Definition | Mycobacterium bovis AF2122/97, complete genome. |
|---|---|
| Accession | NC_002945 |
| Length | 4,345,492 |
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The map label for this gene is pks1
Identifier: 31794123
GI number:
Start: 3248190
End: 3254528
Strand: Reverse
Name: pks1
Synonym: Mb2971c
Alternate gene names: NA
Gene position: NA
Preceding gene: 31794124
Following gene: 31794122
Centisome position: NA
GC content: NA
Gene sequence:
>6339_bases GTGATAGAGGAGCAACGGACGATGAGCGTTGAAGGTGCCGACCAGCAGAGCGAAAAGCTTTTTCACTACCTAAAGAAGGT TGCTGTCGAGCTCGATGAGACACGCGCTCGGCTGCGTGAATATGAGCAACGCGCGACAGAACCGGTGGCGGTGGTGGGAA TCGGCTGCCGATTTCCGGGCGGCGTGGATGGCCCGGACGGACTCTGGGATGTCGTTTCGGCGGGGCGCGACGTGGTGTCG GAGTTTCCGACCGATCGGGGCTGGGATGTTGAGGGGCTATACGATCCGGATCCCGACGCTGAGGGCAAAACCTACACGCG ATGGGGGGCATTTCTAGACGACGCCACCGGCTTTGACGCCGGGTTCTTCGGCATCGCTCCTAGTGAAGTGTTGGCGATGG ATCCTCAGCAGCGGTTGATGCTGGAGGTTTCGTGGGAGGCGTTGGAGCACGCGGGGATTGACCCGTTGTCGTTGCGTGGT TCGGCGACCGGGGTGTACACCGGCATTTTCGCGGCGAGTTACGGCAATAGGGATACCGGGGGGCTGCAAGGGTACGGGTT GACCGGCACGTCAATCAGCGTGGCCTCGGGACGTGTGTCGTACGTATTGGGGCTGCAGGGCCCGGCGGTGTCAGTGGATA CCGCTTGTTCGTCGTCGTTGGTGGCGATCCATTGGGCGATGTCGTCATTGCGCTCCGGGGAGTGTGATTTGGCGTTGGCC GGTGGGGTGACGGTGATGGGGCTGCCGTCGATTTTTGTGGGGTTTTCCCGGCAGCGGGGGTTGGCTGCCGATGGGCGATG TAAGGCGTTTGCGGCCGCGGCCGACGGCACCGGGTGGGGCGAGGGCGCCGGGGTGGTTGTGCTGGAGCGGCTATCGGACG CCCGGCGGTTGGGGCATTCGGTGCTGGCGGTGGTGCGGGGGAGCGCGGTCAACCAGGATGGTGCGTCCAATGGGCTGACC GCGCCCAATGGGCTCGCCCAGCAGCGAGTGATCCAGGCGGCGTTGGCCAACGCCGGGTTGTCCGCCGCAGACGTAGACGT GGTGGAGGCACACGGGACCGCCACCACGTTGGGTGATCCCATCGAAGCGCAGGCATTGCTGTCCACCTACGGGCAGGGAC GTCCAGCGGAGCAGCCGCTGTGGGTGGGCTCAATCAAGTCGAACATGGGCCACACCCAGGCCGCCGCGGGGGTCGCCGGG GTGATCAAGATGGTGCAGGCGATGCGTCATGGGGTGATGCCGGCGACGTTGCATGTGGATGAGCCTTCCCCGCGGGTGGA TTGGACCAGCGGCGCGGTGTCGGTGTTGACCGAGGCCAGGGAGTGGTCGGTTGACGGGCGTCCGCGCCGGGCGGCGGTGT CCTCCTTTGGGATCAGCGGCACCAACGCGCATCTGATCTTGGAAGAGGCCCCCGTACCAGCCCCCGCAGAGGCGCCGGTT GAGGCGAGCGAAAGCACCGGGGGGCCGCGGCCGTCGATGGTGCCGTGGGTGATTTCGGCGAGATCGGCTGAGGCGTTGAC GGCGCAGGCGGGTCGACTTATGGCCCACGTGCAGGCCAACCCAGGGCTGGATCCGATCGATGTGGGGTGCTCGTTGGCCA GTCGCTCGGTGTTTGAGCACCGAGCGGTGGTGGTCGGCGCAAGCCGTGAGCAACTGATTGCCGGGCTGGCTGGGCTCGCG GCGGGCGAGCCGGGTGCCGGCGTGGCGGTCGGTCAGCCAGGGTCGGTGGGCAAGACGGTGGTCGTGTTTCCTGGGCAGGG CGCGCAGCGCATCGGGATGGGCCGCGAGTTGTACGGCGAGTTGCCCGTGTTTGCGCAGGCATTCGATGCGGTGGCCGACG AGTTGGACCGGCATCTGCGGTTGCCGCTGCGCGACGTTATTTGGGGTGCCGATGCGGATTTGCTTGACAGCACCGAATTT GCTCAGCCCGCGTTGTTCGCGGTGGAGGTGGCATCGTTCGCGGTGTTGCGGGATTGGGGTGTGCTTCCGGACTTCGTCAT GGGTCACTCCGTTGGAGAGCTGGCGGCGGCGCACGCGGCCGGTGTGTTGACGTTGGCGGACGCGGCGATGCTGGTGGTGG CGCGGGGCCGGTTGATGCAGGCGCTGCCGGCAGGCGGTGCGATGGTGGCGGTGGCTGCCAGTGAGGACGAGGTGGAGCCG CTGCTGGGTGAGGGTGTGGGGATCGCTGCGATCAACGCGCCCGAATCGGTGGTGATCTCCGGTGCGCAGGCCGCGGCAAA TGCGATTGCGGATCGGTTCGCCGCGCAGGGTCGGCGGGTGCACCAGTTGGCGGTCTCGCATGCGTTTCATTCGCCGTTGA TGGAGCCGATGCTCGAGGAGTTCGCGCGTGTCGCGGCCCGGGTGCAGGCACGCGAGCCCCAGCTTGGGCTGGTGTCGAAC GTGACGGGCGAGTTGGCCGGCCCTGATTTCGGGTCGGCGCAGTACTGGGTGGACCACGTTCGTCGGCCGGTGCGCTTCGC GGACAGTGCGCGTCATTTGCAGACCCTTGGGGCGACCCACTTCATCGAGGCCGGCCCGGGAAGTGGTTTGACTGGCTCGA TCGAGCAGTCCTTGGCCCCGGCTGAGGCGATGGTGGTGTCGATGCTGGGCAAAGACCGGCCCGAGCTGGCCTCGGCGCTC GGTGCTGCCGGTCAGGTGTTCACCACCGGTGTGCCGGTGCAGTGGTCGGCGGTGTTCGCCGGCTCGGGTGGACGGCGGGT GCAGCTGCCCACGTATGCGTTTCAGCGACGGCGGTTTTGGGAGACGCCGGGCGCGGATGGGCCCGCCGATGCGGCCGGGT TGGGTCTGGGCGCGACCGAGCATGCCTTGTTGGGTGCGGTGGTCGAGCGGCCCGATTCTGACGAGGTGGTGCTGACCGGC CGGTTGTCGCTTGCGGATCAGCCGTGGCTGGCCGACCACGTGGTGAACGGGGTGGTGCTGTTCCCCGGGGCGGGTTTTGT GGAGTTGGTGATCCGCGCCGGTGATGAGGTCGGGTGCGCGCTCATCGAAGAGTTGGTGCTGGCCGCACCGTTGGTGATGC ACCCGGGTGTCGGGGTTCAGGTGCAGGTGGTCGTCGGGGCTGCCGATGAATCCGGGCACCGTGCGGTGTCGGTGTATTCC CGCGGTGATCAATCCCAGGGTTGGTTGCTGAACGCCGAAGGCATGCTGGGGGTGGCTGCCGCTGAGACGCCGATGGATTT GTCCGTGTGGCCGCCCGAGGGCGCGGAGAGTGTGGATATCTCGGACGGCTATGCGCAGTTGGCCGAGCGCGGTTATGCCT ACGGCCCCGCGTTTCAGGGTCTGGTGGCGATCTGGCGGCGGGGGTCGGAGCTGTTCGCCGAAGTTGTAGCCCCCGGCGAG GCCGGCGTGGCCGTCGACCGAATGGGGATGCATCCGGCGGTGTTGGACGCGGTGCTGCATGCCCTCGGGCTGGCCGTCGA GAAGACCCAGGCGAGCACCGAGACGAGACTGCCGTTTTGCTGGCGTGGGGTGTCGCTGCATGCCGGCGGCGCTGGACGGG TGCGGGCCCGCTTCGCGTCCGCGGGCGCGGATGCGATTTCCGTGGACGTCTGCGACGCCACTGGGCTGCCGGTGTTGACG GTGCGCTCGCTGGTTACTCGCCCGATAACCGCAGAACAGCTGCGCGCCGCCGTGACCGCGGCCGGCGGTGCGTCCGATCA GGGGCCGCTGGAAGTGGTGTGGTCGCCGATCTCGGTGGTCAGCGGCGGCGCTAACGGGTCCGCCCCACCTGCCCCGGTGT CTTGGGCGGACTTTTGCGCCGGCAGTGATGGTGACGCCAGTGTCGTGGTGTGGGAACTCGAGTCTGCCGGTGGCCAAGCA TCCTCGGTGGTGGGCTCGGTGTATGCGGCCACCCACACCGCCCTGGAGGTGTTGCAGTCCTGGCTCGGCGCGGATCGGGC GGCCACGTTGGTGGTGTTGACCCATGGTGGCGTGGGGCTGGCTGGCGAGGACATCAGCGACCTGGCCGCCGCCGCGGTGT GGGGCATGGCGCGTTCCGCGCAGGCCGAAAATCCCGGCCGGATCGTGTTGATCGACACCGATGCGGCGGTGGATGCCTCG GTGCTAGCCGGCGTCGGGGAACCCCAGCTGCTGGTGCGCGGCGGCACTGTGCACGCCCCCCGGCTGTCCCCGGCCCCGGC GTTGCTAGCGTTACCGGCGGCAGAGTCGGCGTGGCGATTGGCCGCCGGTGGTGGCGGGACCCTGGAGGATTTGGTGATCC AGCCCTGCCCGGAGGTACAGGCACCGCTACAGGCGGGGCAGGTGCGCGTGGCGGTGGCGGCCGTCGGGGTCAACTTCCGC GATGTGGTGGCCGCCCTAGGGATGTATCCCGGCCAGGCTCCACCGCTGGGTGCCGAAGGCGCCGGGGTGGTGCTTGAGAC CGGTCCCGAAGTGACCGATCTTGCCGTCGGTGACGCCGTGATGGGATTCCTGGGCGGGGCCGGTCCGCTGGCGGTGGTGG ATCAGCAACTGGTTACCCGGGTGCCGCAAGGCTGGTCGTTTGCTCAGGCAGCCGCTGTGCCGGTGGTGTTCTTGACGGCC TGGTACGGGTTGGCCGATTTAGCCGAGATCAAGGCGGGCGAATCGGTGCTGATCCATGCCGGTACCGGCGGTGTGGGCAT GGCGGCTGTGCAGCTGGCTCGCCAGTGGGGCGTGGAGGTTTTCGTCACCGCCAGCCGTGGCAAGTGGGACACGCTGCGCG CCATGGGGTTTGACGACGACCATATCGGCGATTCCCGCACATGCGAGTTCGAGGAGAAGTTCCTGGCGGTCACCGAGGGC CGCGGGGTTGATGTGGTGCTCGACTCGCTGGCCGGTGAGTTCGTGGATGCGTCGCTGCGCTTACTGGTCCGCGGTGGGCG TTTCCTCGAGATGGGCAAGACGGATATCCGCGATGCGCAGGAGATCGCCGCTAATTATCCCGGCGTGCAGTATCGGGCGT TCGACCTGTCGGAGGCCGGCCCGGCACGCATGCAGGAGATGTTGGCCGAGGTGCGGGAGCTGTTCGACACCCGGGAGCTG CACCGGCTACCGGTCACCACGTGGGATGTGCGCTGCGCCCCGGCGGCCTTCCGGTTCATGAGCCAGGCCCGCCATATCGG CAAGGTTGTCTTAACCATGCCCTCGGCGTTGGCCGACCGGCTTGCCGACGGCACGGTGGTGATCACCGGTGCCACCGGGG CGGTTGGTGGGGTGTTGGCCCGCCACCTGGTTGGCGCCTATGGGGTGCGTCATCTGGTGTTGGCCAGTCGGCGGGGCGAT CGCGCGGAGGGAGCGGCCGAATTGGCCGCCGACTTGACGGAGGCCGGCGCCAAGGGGCAGGTGGTGGCCTGTGACGTGGC CGATCGCGCTGCGGTAGCGGGGTTGTTTGCCCAGCTGTCGCGGGAGTACCCGCCGGTGCGCGGGGTGATTCATGCCGCCG GCGTGCTCGATGACGCAGTGATCACCTCGTTGACACCGGACCGCATCGATACGGTGTTGCGGGCCAAGGTGGACGCGGCG TGGAACCTGCACCAGGCCACCAGTGACCTGGATTTGTCGATGTTTGTGCTGTGCTCATCGATCGCGGCCACGGTCGGCTC GCCGGGGCAGGGCAACTACTCGGCGGCAAACGCGTTTCTGGACGGGTTGGCCGCTCACCGGCAGGCCGCAGGGTTGGCCG GGATATCACTGGCGTGGGGTTTGTGGGAACAGCCTGGCGGCATGACCGCGCATTTGAGCAGCCGAGATCTGGCCCGCATG AGCCGCAGCGGGCTGGCTCCGATGAGCCCTGCCGAAGCGGTGGAATTGTTTGACGCTGCGCTGGCCATCGATCACCCTCT GGCGGTGGCCACGCTCTTGGACCGGGCTGCACTAGACGCCCGGGCCCAGGCCGGTGCGTTGCCGGCGCTGTTCAGCGGGC TCGCGCGCCGCCCACGCCGACGCCAAATCGACGACACCGGTGACGCCACCTCGTCGAAGTCGGCGCTGGCTCAACGCCTA CACGGGCTGGCCGCGGACGAACAACTCGAGCTGCTAGTGGGGCTGGTGTGTCTGCAGGCAGCGGCAGTGCTGGGTAGGCC CTCCGCCGAGGACGTCGACCCCGACACCGAATTCGGCGACCTCGGTTTCGACTCATTAACGGCTGTGGAGTTACGCAACC GCCTCAAAACCGCCACCGGACTGACGCTGCCACCTACCGTGATTTTCGATCATCCCACTCCCACTGCGGTCGCCGAGTAT GTCGCCCAGCAAATGTCTGGCAGCCGCCCAACGGAATCCGGTGATCCGACGTCGCAGGTTGTCGAACCCGCCGCCGCGGA AGTATCGGTCCATGCCTAG
Upstream 100 bases:
>100_bases TGGGCACCATCGCCGGCAGCGAGGCGGGCCTGGGCAAGCTGATCCAGGCTGCTTCGACTCCTGACGAAATTTTCCAGCTA ATCGATTCCGAACTTGGGAA
Downstream 100 bases:
>100_bases CCCGGCGACGGCGAGCGCCGGAATGGCGCGAGTGAGGAGGCGGGCAATTTGGCGGGGCCCGGCGACGGCGAGCGCCGGAA TGGCGCGAGTGAGGAGGCGG
Product: polyketide synthase PKS1
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>2112_residues MIEEQRTMSVEGADQQSEKLFHYLKKVAVELDETRARLREYEQRATEPVAVVGIGCRFPGGVDGPDGLWDVVSAGRDVVS EFPTDRGWDVEGLYDPDPDAEGKTYTRWGAFLDDATGFDAGFFGIAPSEVLAMDPQQRLMLEVSWEALEHAGIDPLSLRG SATGVYTGIFAASYGNRDTGGLQGYGLTGTSISVASGRVSYVLGLQGPAVSVDTACSSSLVAIHWAMSSLRSGECDLALA GGVTVMGLPSIFVGFSRQRGLAADGRCKAFAAAADGTGWGEGAGVVVLERLSDARRLGHSVLAVVRGSAVNQDGASNGLT APNGLAQQRVIQAALANAGLSAADVDVVEAHGTATTLGDPIEAQALLSTYGQGRPAEQPLWVGSIKSNMGHTQAAAGVAG VIKMVQAMRHGVMPATLHVDEPSPRVDWTSGAVSVLTEAREWSVDGRPRRAAVSSFGISGTNAHLILEEAPVPAPAEAPV EASESTGGPRPSMVPWVISARSAEALTAQAGRLMAHVQANPGLDPIDVGCSLASRSVFEHRAVVVGASREQLIAGLAGLA AGEPGAGVAVGQPGSVGKTVVVFPGQGAQRIGMGRELYGELPVFAQAFDAVADELDRHLRLPLRDVIWGADADLLDSTEF AQPALFAVEVASFAVLRDWGVLPDFVMGHSVGELAAAHAAGVLTLADAAMLVVARGRLMQALPAGGAMVAVAASEDEVEP LLGEGVGIAAINAPESVVISGAQAAANAIADRFAAQGRRVHQLAVSHAFHSPLMEPMLEEFARVAARVQAREPQLGLVSN VTGELAGPDFGSAQYWVDHVRRPVRFADSARHLQTLGATHFIEAGPGSGLTGSIEQSLAPAEAMVVSMLGKDRPELASAL GAAGQVFTTGVPVQWSAVFAGSGGRRVQLPTYAFQRRRFWETPGADGPADAAGLGLGATEHALLGAVVERPDSDEVVLTG RLSLADQPWLADHVVNGVVLFPGAGFVELVIRAGDEVGCALIEELVLAAPLVMHPGVGVQVQVVVGAADESGHRAVSVYS RGDQSQGWLLNAEGMLGVAAAETPMDLSVWPPEGAESVDISDGYAQLAERGYAYGPAFQGLVAIWRRGSELFAEVVAPGE AGVAVDRMGMHPAVLDAVLHALGLAVEKTQASTETRLPFCWRGVSLHAGGAGRVRARFASAGADAISVDVCDATGLPVLT VRSLVTRPITAEQLRAAVTAAGGASDQGPLEVVWSPISVVSGGANGSAPPAPVSWADFCAGSDGDASVVVWELESAGGQA SSVVGSVYAATHTALEVLQSWLGADRAATLVVLTHGGVGLAGEDISDLAAAAVWGMARSAQAENPGRIVLIDTDAAVDAS VLAGVGEPQLLVRGGTVHAPRLSPAPALLALPAAESAWRLAAGGGGTLEDLVIQPCPEVQAPLQAGQVRVAVAAVGVNFR DVVAALGMYPGQAPPLGAEGAGVVLETGPEVTDLAVGDAVMGFLGGAGPLAVVDQQLVTRVPQGWSFAQAAAVPVVFLTA WYGLADLAEIKAGESVLIHAGTGGVGMAAVQLARQWGVEVFVTASRGKWDTLRAMGFDDDHIGDSRTCEFEEKFLAVTEG RGVDVVLDSLAGEFVDASLRLLVRGGRFLEMGKTDIRDAQEIAANYPGVQYRAFDLSEAGPARMQEMLAEVRELFDTREL HRLPVTTWDVRCAPAAFRFMSQARHIGKVVLTMPSALADRLADGTVVITGATGAVGGVLARHLVGAYGVRHLVLASRRGD RAEGAAELAADLTEAGAKGQVVACDVADRAAVAGLFAQLSREYPPVRGVIHAAGVLDDAVITSLTPDRIDTVLRAKVDAA WNLHQATSDLDLSMFVLCSSIAATVGSPGQGNYSAANAFLDGLAAHRQAAGLAGISLAWGLWEQPGGMTAHLSSRDLARM SRSGLAPMSPAEAVELFDAALAIDHPLAVATLLDRAALDARAQAGALPALFSGLARRPRRRQIDDTGDATSSKSALAQRL HGLAADEQLELLVGLVCLQAAAVLGRPSAEDVDPDTEFGDLGFDSLTAVELRNRLKTATGLTLPPTVIFDHPTPTAVAEY VAQQMSGSRPTESGDPTSQVVEPAAAEVSVHA
Sequences:
NA
Specific function: NA
COG id: COG3321
COG function: function code Q; Polyketide synthase modules and related proteins
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA