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The map label for this gene is recB [H]

Identifier: 41410191

GI number: 41410191

Start: 4565559

End: 4566695

Strand: Reverse

Name: recB [H]

Synonym: MAP4093c

Alternate gene names: 41410191

Gene position: 4566695-4565559 (Counterclockwise)

Preceding gene: 41410192

Following gene: 41410190

Centisome position: 94.55

GC content: 70.1

Gene sequence:

>1137_bases
GTGGCCTACCTGCTGGACGGCACCGAGGACCGGCTCGCCGCGCGGCGGCAACGCCTGCGCGACGCGCTGGCCGGCTTCGA
CGCGGCGACGATCGCCACCACGCATCAGTTCTGCCAGCTGGTGTTGCGCTCGCTCGGGGTGGCCGGCGACACCGCCGCCG
GGGTGACCTTGCTGGACAGCCTCGACGAGCTGGTGGCCGAGATCGTCGATGACCTGTATCTGGCACATTTCGGGCAGGAC
CACGACGACCCGGTGCTGCACTATCGGGAGGCGCTGCGGTTGGCCCGCGACGTGGTCAACAACCCGTCGGCGCAGCTGCG
GCCGCTGCACCCCGAGCCCGGTTCGCGAGCGGCGGTCAGCCTGCGCTTCGCCAATGATGTTCTGGCCGAACTGGATACGC
GCAAACGCCGGCTCGGCGTGCTGGGCTACGACGATCTGCTGACCCGGCTGGCCGACGCGCTGGCCACCGAGCACTCCCCC
GCCCGGCTGCGCATGCACCAGCGCTGGCCGATCGTGATGGTCGACGAGTTCCAGGACACCGACCCGGTGCAGTGGCAGGT
GATCGACCGCGCGTTCAGCGGCCGCTCGACGCTGATTCTCATCGGCGACCCCAAGCAGGCGATCTACGCGTTTCGCGGCG
GCGACATCGTCACCTACCTGCGGGCCGCCGAGACCGCGGGGCAGAAAAAGACGCTGGACACCAACTGGCGCAGCGATTCC
GCGCTGCTGCAGCGGCTGCAGGTGGTGCTGCGCGGCGCGCAGCTCGGTGACCCCGCGATCGCGGTGAACGACGTCGCGGC
GCACCACCGGGGTCACCGGCTGTCCGGGGCACCGCGCAACGACCCGTTCCGGCTGCGGGTGGTGTCACGAAACACGTTGG
GACGTCGCGGTATTGCCAATCTTCCCATCGACGAGCTGCGACAGCACATCGGCGCCGATCTCGCCGCCGACATTCGTGCG
CTGCTGGCCGCCGGCGCCACCTTCGACGGGAAACCGTTGCGGGCGGGCGACATCGCGGTCATCGTGGAACGGCACCGGGA
CGCCCAGGCCTGTTTCACCGCGCTGTGCGACGCCGGCGTTCCCGCCGTCTACACCGGCAACTCCGACGTGTTCACCTCGC
AGGCGGCCGAGGATTGA

Upstream 100 bases:

>100_bases
CCGGGCCGCCAGCCAGGAGCTGCGGGAACGGGTGCGCTGTCAAATCGTCGACGCGGTAGCCGCTTTCGCCGACCCGTCGC
GGGCCGCCGACAACTAGCTG

Downstream 100 bases:

>100_bases
CTGTGCCTGCTGGAGGCGTTCGATCAGCCGCACCGGCCCGGCGTGGTGCGCGCGGCGGCGGCGACGATGTTCTTCGGCGA
GACCGCCGAGACGTTGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MAYLLDGTEDRLAARRQRLRDALAGFDAATIATTHQFCQLVLRSLGVAGDTAAGVTLLDSLDELVAEIVDDLYLAHFGQD
HDDPVLHYREALRLARDVVNNPSAQLRPLHPEPGSRAAVSLRFANDVLAELDTRKRRLGVLGYDDLLTRLADALATEHSP
ARLRMHQRWPIVMVDEFQDTDPVQWQVIDRAFSGRSTLILIGDPKQAIYAFRGGDIVTYLRAAETAGQKKTLDTNWRSDS
ALLQRLQVVLRGAQLGDPAIAVNDVAAHHRGHRLSGAPRNDPFRLRVVSRNTLGRRGIANLPIDELRQHIGADLAADIRA
LLAAGATFDGKPLRAGDIAVIVERHRDAQACFTALCDAGVPAVYTGNSDVFTSQAAED

Sequences:

>Translated_378_residues
MAYLLDGTEDRLAARRQRLRDALAGFDAATIATTHQFCQLVLRSLGVAGDTAAGVTLLDSLDELVAEIVDDLYLAHFGQD
HDDPVLHYREALRLARDVVNNPSAQLRPLHPEPGSRAAVSLRFANDVLAELDTRKRRLGVLGYDDLLTRLADALATEHSP
ARLRMHQRWPIVMVDEFQDTDPVQWQVIDRAFSGRSTLILIGDPKQAIYAFRGGDIVTYLRAAETAGQKKTLDTNWRSDS
ALLQRLQVVLRGAQLGDPAIAVNDVAAHHRGHRLSGAPRNDPFRLRVVSRNTLGRRGIANLPIDELRQHIGADLAADIRA
LLAAGATFDGKPLRAGDIAVIVERHRDAQACFTALCDAGVPAVYTGNSDVFTSQAAED
>Mature_377_residues
AYLLDGTEDRLAARRQRLRDALAGFDAATIATTHQFCQLVLRSLGVAGDTAAGVTLLDSLDELVAEIVDDLYLAHFGQDH
DDPVLHYREALRLARDVVNNPSAQLRPLHPEPGSRAAVSLRFANDVLAELDTRKRRLGVLGYDDLLTRLADALATEHSPA
RLRMHQRWPIVMVDEFQDTDPVQWQVIDRAFSGRSTLILIGDPKQAIYAFRGGDIVTYLRAAETAGQKKTLDTNWRSDSA
LLQRLQVVLRGAQLGDPAIAVNDVAAHHRGHRLSGAPRNDPFRLRVVSRNTLGRRGIANLPIDELRQHIGADLAADIRAL
LAAGATFDGKPLRAGDIAVIVERHRDAQACFTALCDAGVPAVYTGNSDVFTSQAAED

Specific function: Required for efficient DNA repair; it catalyzes the unwinding of double-stranded DNA and the cleavage of single- stranded DNA and it stimulates local genetic recombination. All of these activities require concomitant hydrolysis of ATP [H]

COG id: COG1074

COG function: function code L; ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 uvrD-like helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1789183, Length=264, Percent_Identity=34.0909090909091, Blast_Score=126, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014017
- InterPro:   IPR000212
- InterPro:   IPR004586
- InterPro:   IPR011604
- InterPro:   IPR014016
- InterPro:   IPR011335 [H]

Pfam domain/function: PF00580 UvrD-helicase [H]

EC number: =3.1.11.5 [H]

Molecular weight: Translated: 41372; Mature: 41241

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYLLDGTEDRLAARRQRLRDALAGFDAATIATTHQFCQLVLRSLGVAGDTAAGVTLLDS
CCEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LDELVAEIVDDLYLAHFGQDHDDPVLHYREALRLARDVVNNPSAQLRPLHPEPGSRAAVS
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEE
LRFANDVLAELDTRKRRLGVLGYDDLLTRLADALATEHSPARLRMHQRWPIVMVDEFQDT
EEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHEECCCCCEEEEECCCCC
DPVQWQVIDRAFSGRSTLILIGDPKQAIYAFRGGDIVTYLRAAETAGQKKTLDTNWRSDS
CCCHHHHHHHHHCCCCEEEEEECCHHHEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCHH
ALLQRLQVVLRGAQLGDPAIAVNDVAAHHRGHRLSGAPRNDPFRLRVVSRNTLGRRGIAN
HHHHHHHHHHHCCCCCCCCEEEHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC
LPIDELRQHIGADLAADIRALLAAGATFDGKPLRAGDIAVIVERHRDAQACFTALCDAGV
CCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCC
PAVYTGNSDVFTSQAAED
CEEEECCCCEECCCCCCC
>Mature Secondary Structure 
AYLLDGTEDRLAARRQRLRDALAGFDAATIATTHQFCQLVLRSLGVAGDTAAGVTLLDS
CEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LDELVAEIVDDLYLAHFGQDHDDPVLHYREALRLARDVVNNPSAQLRPLHPEPGSRAAVS
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEE
LRFANDVLAELDTRKRRLGVLGYDDLLTRLADALATEHSPARLRMHQRWPIVMVDEFQDT
EEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHEECCCCCEEEEECCCCC
DPVQWQVIDRAFSGRSTLILIGDPKQAIYAFRGGDIVTYLRAAETAGQKKTLDTNWRSDS
CCCHHHHHHHHHCCCCEEEEEECCHHHEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCHH
ALLQRLQVVLRGAQLGDPAIAVNDVAAHHRGHRLSGAPRNDPFRLRVVSRNTLGRRGIAN
HHHHHHHHHHHCCCCCCCCEEEHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC
LPIDELRQHIGADLAADIRALLAAGATFDGKPLRAGDIAVIVERHRDAQACFTALCDAGV
CCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCC
PAVYTGNSDVFTSQAAED
CEEEECCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]