Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is 41410187
Identifier: 41410187
GI number: 41410187
Start: 4559674
End: 4561212
Strand: Direct
Name: 41410187
Synonym: MAP4089
Alternate gene names: NA
Gene position: 4559674-4561212 (Clockwise)
Preceding gene: 41410186
Following gene: 41410194
Centisome position: 94.41
GC content: 70.83
Gene sequence:
>1539_bases ATGTTGCCCCGCATGATCAAAACCCAGCTGGTGCTGCTGACGGCGGTGGCGGTGGCCGCGGTGGTCGTCCTCGGCTGGTA CTACCTGCGGATCCCGAGCCTGGCCGGCATCGGCCGCTACACCCTGTACGCCGAATTGCCGCAATCCGGCGGCCTGTACC GGACCGCCAACGTCACCTACCGGGGAATCACCATCGGCAAGGTCACCGGCGTCGAGCCGACCGAGCGCGGCGCGCGGGCG ACGATGAGCATCGAGGACGGCTACCGGATCCCGGCCGATGCGGCCGCCCACGTGCATTCGGTCTCGGCGGTGGGCGAGCA GTACGTCGACCTGGTCTCGACCGCCGGGCGCGAACCGTACCTGGCCGACGGGCAGACCATCCACAAAAGCACGGTGCCCA GCCAGATCGGTCCCGCGCTGGACGCCGCCAACCGCGGACTGGCGGTGCTGCCCCGGGACAAGATCGCCTCGCTGCTCTAC GAAACCTCGCAGGCGGTCGGTGGCTTGGGGCCGTCGCTGCGGCGCCTGGTGGATGCCACCCAGGCGATCGCCCACGATTT CCGGGGCAGCATCGACGACGTCGACGACATCGTCGAGCGCTCGGCACCGATCATCGACAGCCAGGCCGATTCCGCTGACA CGCTTGGGCGTTGGGCCGCCAACCTGAACACGTTGGCCGCCCAGACCGCGCGGCAGGACCCGGCGCTGCGCAGCATCCTG ACCAACGCGGCGCCGACGGCCGAGCAGGTGCGGGCCACGTTCGGCGGTGTGCGGGAGTCGCTGCCGCAGACGCTGGCCAG TCTCGAGGTCGTGATCGACATGCTCAAGCGCTATCACAACGGCGTCGAGCAGGCGTTGGTGTTCCTGCCGCAGTCCGGCG CGATCGCCCAGTCGGTGACCGCGCAATCGCCGGGCCAGGCCGCACTGGGCGTCGGCGCCATCTCACTCAACCAGCCGCCG CCCTGCCTGACCGGTTTCCTGCCGGCATCACAGTGGCGCGCCCCGGCGGACACCAGCACGGCGCCGCTGCCGGCCGGCAC CTACTGCAAGATCCCGATGGACGCCACCAATGTCGTTCGGGGAGCCCGCAATTACCCGTGCGTGGACGTGCCGGGCAAGC GGGCGGCCACACCGCGGGAGTGCCGCAGCACCGAGCCCTATGTGCCGCAGGGCACCAACCCCTGGTACGGCGACCCCGAC CAGATACTGACCTGCCCCGCGCCGAGCGCGCGGTGCGACCAACCGGTGAAGCCGGGCCTGGTGATCCCCGCACCCTCGGT CGACAACGGCCTCAATCCGCTGCCCGCCGACCGGCTGCCGGGCACCCCACCGCCGATCAGCGACCCGCTGCAGCGGCCGG GATCGGGCACCGTGGTGTGCAACGGGCAGCAGCCCAACCCGTGCACGTACACCCCCAGCGCGCTCTACGACGTGCGCAGC GGCACGGTGGTGGGCCCCGACGGGGTGGTGTATTCGGTGGCCAATTCGGCCACCATCGGCGACGAGGGGTGGAAGACGAT GCTGGGACAGGCCCGCTGA
Upstream 100 bases:
>100_bases CTGGGGGCGCGACCCCGCCACGATGATCCCCGACGTCCGCTACACGCCCAACCCCAACGACGCCCCGGGCGGACCGCTGG TGGAAAGGGGCGAATGAAAG
Downstream 100 bases:
>100_bases CAACGGCGGTCGATTAGCGCGCCTCGTCCTTGGGCCGGCCGCGCCAGTGTCGGTAGCCGCGATGCGCGGCGAACGCGCCG ACGATCGCGCTCACGCACCA
Product: hypothetical protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family F; Mce Family F; MCE-Family Protein; Mce-Family F; MCE Family Protein; Mce-Related Protein; MCE-Family; Mce Family
Number of amino acids: Translated: 512; Mature: 512
Protein sequence:
>512_residues MLPRMIKTQLVLLTAVAVAAVVVLGWYYLRIPSLAGIGRYTLYAELPQSGGLYRTANVTYRGITIGKVTGVEPTERGARA TMSIEDGYRIPADAAAHVHSVSAVGEQYVDLVSTAGREPYLADGQTIHKSTVPSQIGPALDAANRGLAVLPRDKIASLLY ETSQAVGGLGPSLRRLVDATQAIAHDFRGSIDDVDDIVERSAPIIDSQADSADTLGRWAANLNTLAAQTARQDPALRSIL TNAAPTAEQVRATFGGVRESLPQTLASLEVVIDMLKRYHNGVEQALVFLPQSGAIAQSVTAQSPGQAALGVGAISLNQPP PCLTGFLPASQWRAPADTSTAPLPAGTYCKIPMDATNVVRGARNYPCVDVPGKRAATPRECRSTEPYVPQGTNPWYGDPD QILTCPAPSARCDQPVKPGLVIPAPSVDNGLNPLPADRLPGTPPPISDPLQRPGSGTVVCNGQQPNPCTYTPSALYDVRS GTVVGPDGVVYSVANSATIGDEGWKTMLGQAR
Sequences:
>Translated_512_residues MLPRMIKTQLVLLTAVAVAAVVVLGWYYLRIPSLAGIGRYTLYAELPQSGGLYRTANVTYRGITIGKVTGVEPTERGARA TMSIEDGYRIPADAAAHVHSVSAVGEQYVDLVSTAGREPYLADGQTIHKSTVPSQIGPALDAANRGLAVLPRDKIASLLY ETSQAVGGLGPSLRRLVDATQAIAHDFRGSIDDVDDIVERSAPIIDSQADSADTLGRWAANLNTLAAQTARQDPALRSIL TNAAPTAEQVRATFGGVRESLPQTLASLEVVIDMLKRYHNGVEQALVFLPQSGAIAQSVTAQSPGQAALGVGAISLNQPP PCLTGFLPASQWRAPADTSTAPLPAGTYCKIPMDATNVVRGARNYPCVDVPGKRAATPRECRSTEPYVPQGTNPWYGDPD QILTCPAPSARCDQPVKPGLVIPAPSVDNGLNPLPADRLPGTPPPISDPLQRPGSGTVVCNGQQPNPCTYTPSALYDVRS GTVVGPDGVVYSVANSATIGDEGWKTMLGQAR >Mature_512_residues MLPRMIKTQLVLLTAVAVAAVVVLGWYYLRIPSLAGIGRYTLYAELPQSGGLYRTANVTYRGITIGKVTGVEPTERGARA TMSIEDGYRIPADAAAHVHSVSAVGEQYVDLVSTAGREPYLADGQTIHKSTVPSQIGPALDAANRGLAVLPRDKIASLLY ETSQAVGGLGPSLRRLVDATQAIAHDFRGSIDDVDDIVERSAPIIDSQADSADTLGRWAANLNTLAAQTARQDPALRSIL TNAAPTAEQVRATFGGVRESLPQTLASLEVVIDMLKRYHNGVEQALVFLPQSGAIAQSVTAQSPGQAALGVGAISLNQPP PCLTGFLPASQWRAPADTSTAPLPAGTYCKIPMDATNVVRGARNYPCVDVPGKRAATPRECRSTEPYVPQGTNPWYGDPD QILTCPAPSARCDQPVKPGLVIPAPSVDNGLNPLPADRLPGTPPPISDPLQRPGSGTVVCNGQQPNPCTYTPSALYDVRS GTVVGPDGVVYSVANSATIGDEGWKTMLGQAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53818; Mature: 53818
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPRMIKTQLVLLTAVAVAAVVVLGWYYLRIPSLAGIGRYTLYAELPQSGGLYRTANVTY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEECCEEE RGITIGKVTGVEPTERGARATMSIEDGYRIPADAAAHVHSVSAVGEQYVDLVSTAGREPY EEEEEEEECCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC LADGQTIHKSTVPSQIGPALDAANRGLAVLPRDKIASLLYETSQAVGGLGPSLRRLVDAT CCCCCEEHHHCCCHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH QAIAHDFRGSIDDVDDIVERSAPIIDSQADSADTLGRWAANLNTLAAQTARQDPALRSIL HHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH TNAAPTAEQVRATFGGVRESLPQTLASLEVVIDMLKRYHNGVEQALVFLPQSGAIAQSVT HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCHHHHHH AQSPGQAALGVGAISLNQPPPCLTGFLPASQWRAPADTSTAPLPAGTYCKIPMDATNVVR CCCCCCCEEEEEEEECCCCCCHHCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCHHHHHH GARNYPCVDVPGKRAATPRECRSTEPYVPQGTNPWYGDPDQILTCPAPSARCDQPVKPGL CCCCCCEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCE VIPAPSVDNGLNPLPADRLPGTPPPISDPLQRPGSGTVVCNGQQPNPCTYTPSALYDVRS EECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEECCCCCCCCCCCCHHHHCCCC GTVVGPDGVVYSVANSATIGDEGWKTMLGQAR CCEECCCCEEEEECCCCCCCCHHHHHHHCCCC >Mature Secondary Structure MLPRMIKTQLVLLTAVAVAAVVVLGWYYLRIPSLAGIGRYTLYAELPQSGGLYRTANVTY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEECCEEE RGITIGKVTGVEPTERGARATMSIEDGYRIPADAAAHVHSVSAVGEQYVDLVSTAGREPY EEEEEEEECCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC LADGQTIHKSTVPSQIGPALDAANRGLAVLPRDKIASLLYETSQAVGGLGPSLRRLVDAT CCCCCEEHHHCCCHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH QAIAHDFRGSIDDVDDIVERSAPIIDSQADSADTLGRWAANLNTLAAQTARQDPALRSIL HHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH TNAAPTAEQVRATFGGVRESLPQTLASLEVVIDMLKRYHNGVEQALVFLPQSGAIAQSVT HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCHHHHHH AQSPGQAALGVGAISLNQPPPCLTGFLPASQWRAPADTSTAPLPAGTYCKIPMDATNVVR CCCCCCCEEEEEEEECCCCCCHHCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCHHHHHH GARNYPCVDVPGKRAATPRECRSTEPYVPQGTNPWYGDPDQILTCPAPSARCDQPVKPGL CCCCCCEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCE VIPAPSVDNGLNPLPADRLPGTPPPISDPLQRPGSGTVVCNGQQPNPCTYTPSALYDVRS EECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEECCCCCCCCCCCCHHHHCCCC GTVVGPDGVVYSVANSATIGDEGWKTMLGQAR CCEECCCCEEEEECCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA