| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410070
Identifier: 41410070
GI number: 41410070
Start: 4430571
End: 4431629
Strand: Reverse
Name: 41410070
Synonym: MAP3972c
Alternate gene names: NA
Gene position: 4431629-4430571 (Counterclockwise)
Preceding gene: 41410071
Following gene: 41410063
Centisome position: 91.76
GC content: 66.76
Gene sequence:
>1059_bases GTGACGAACCCACAAGGACCCCCGAATCAGGACCCGTCGACGTGGGGCCGTCCCGCCAACCAGGGACCCTACGGCCAGCC TCCCACGGAACGGCCGACCGAGCGGATCAACACCGGCGGCCCAGGTCAGGCGCCCGGTCAGGTGCCGCCACCGCCGCCGG CGCCCGCTCCCCCGCCCCCCGGCCAGACCGAACGATTCGGCGCGCCGCGGCCCCAGATGCAGCAGCCCGGCTACCCGCCG CCGCCCACCCCGCCCGCCGGGCCCACCGAGCGGCTGGCCACCGCGCCGAACCCCGACAACGGGCCGGCGAAAAAGAAGCG CCGGTTCCTGCGTGACCCGGTCTCGGTGCTGTTGATCTTCATCATCGTGTTCGCCCTGCTCATCGCCGGGTTCATCGGGG CGGAGCTGTACGTGCGGCACGTCGCCGACACCAAGGTCGCCCAGGCGGTGGCCTGCGAGGTCAAGGACCAGGCCACCGCG TCCTTCGGCGTGACACCGCTGATGCTGTGGCAGCAGGCGACCAAGCACTACACCAACATCTCGGTGCAGACCGCCGGCAA CAACATCCGCGATGCCAAGGGCATGAAGCTCTCGATCAATATCAATGACGTCCGGCTCAAGGACAACGGCAACTCGAAGG GCACCATCGGCGCATTGGACGCCACTATCGACTGGACCACCGACGGCATCAAACAGTCGGTGCAGAACGCCATCCCGGTG CTTGGCCCGTTCGTCACCAACACGGTGACCACCCATCCCGCCGACGGCACCATCGAGCTGAAAGGCATGTTGGACAACAT CACCGCCAAGCCGGTGATCTCGGGCACCGGGTTGCAACTACAGATCGTCAGCTTCAACGCGCTGGGCTTCACCATGCCCA AGGAGTCGGTGCAGTCGACGCTGGACGACTTCACCTCGAACCTGACGAAGAACTACCCGCTGGGCATTCACGCGGACAGC GTGCAGGTCACCGACAAGGGTGTGACCAGCCACTTCTCCACCCGCAACGCCGCCATCCCGACCGGCAACAACAACGACCC CTGCTTCGCCAACCTCTGA
Upstream 100 bases:
>100_bases CCGACATCGACGTCGACCGGGTCGCGCAGGCCCGCAAGACTATCGCGGCGCTCAGCAACCGCTCGGACTTTGCTCAGGTT GGTAGGGCAGAATCGGTCGG
Downstream 100 bases:
>100_bases CGCCGGCGGTCCTCAGCCCAGCCCGTCGAGCACGGCCCGGGTGCCCGACAATCCCAGCCGGGTGGCGCCGGCATCCAGCA TCGCCAGCGCATCGGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MTNPQGPPNQDPSTWGRPANQGPYGQPPTERPTERINTGGPGQAPGQVPPPPPAPAPPPPGQTERFGAPRPQMQQPGYPP PPTPPAGPTERLATAPNPDNGPAKKKRRFLRDPVSVLLIFIIVFALLIAGFIGAELYVRHVADTKVAQAVACEVKDQATA SFGVTPLMLWQQATKHYTNISVQTAGNNIRDAKGMKLSININDVRLKDNGNSKGTIGALDATIDWTTDGIKQSVQNAIPV LGPFVTNTVTTHPADGTIELKGMLDNITAKPVISGTGLQLQIVSFNALGFTMPKESVQSTLDDFTSNLTKNYPLGIHADS VQVTDKGVTSHFSTRNAAIPTGNNNDPCFANL
Sequences:
>Translated_352_residues MTNPQGPPNQDPSTWGRPANQGPYGQPPTERPTERINTGGPGQAPGQVPPPPPAPAPPPPGQTERFGAPRPQMQQPGYPP PPTPPAGPTERLATAPNPDNGPAKKKRRFLRDPVSVLLIFIIVFALLIAGFIGAELYVRHVADTKVAQAVACEVKDQATA SFGVTPLMLWQQATKHYTNISVQTAGNNIRDAKGMKLSININDVRLKDNGNSKGTIGALDATIDWTTDGIKQSVQNAIPV LGPFVTNTVTTHPADGTIELKGMLDNITAKPVISGTGLQLQIVSFNALGFTMPKESVQSTLDDFTSNLTKNYPLGIHADS VQVTDKGVTSHFSTRNAAIPTGNNNDPCFANL >Mature_351_residues TNPQGPPNQDPSTWGRPANQGPYGQPPTERPTERINTGGPGQAPGQVPPPPPAPAPPPPGQTERFGAPRPQMQQPGYPPP PTPPAGPTERLATAPNPDNGPAKKKRRFLRDPVSVLLIFIIVFALLIAGFIGAELYVRHVADTKVAQAVACEVKDQATAS FGVTPLMLWQQATKHYTNISVQTAGNNIRDAKGMKLSININDVRLKDNGNSKGTIGALDATIDWTTDGIKQSVQNAIPVL GPFVTNTVTTHPADGTIELKGMLDNITAKPVISGTGLQLQIVSFNALGFTMPKESVQSTLDDFTSNLTKNYPLGIHADSV QVTDKGVTSHFSTRNAAIPTGNNNDPCFANL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37376; Mature: 37244
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPQGPPNQDPSTWGRPANQGPYGQPPTERPTERINTGGPGQAPGQVPPPPPAPAPPPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC GQTERFGAPRPQMQQPGYPPPPTPPAGPTERLATAPNPDNGPAKKKRRFLRDPVSVLLIF CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHCHHHHHHHH IIVFALLIAGFIGAELYVRHVADTKVAQAVACEVKDQATASFGVTPLMLWQQATKHYTNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHCE SVQTAGNNIRDAKGMKLSININDVRLKDNGNSKGTIGALDATIDWTTDGIKQSVQNAIPV EEEECCCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHH LGPFVTNTVTTHPADGTIELKGMLDNITAKPVISGTGLQLQIVSFNALGFTMPKESVQST HHHHHHCCEEECCCCCEEEEEEHHCCCCCCCEECCCCCEEEEEEECCCCCCCCHHHHHHH LDDFTSNLTKNYPLGIHADSVQVTDKGVTSHFSTRNAAIPTGNNNDPCFANL HHHHHHHHCCCCCCEEECCCEEECCCCCHHHHCCCCCCCCCCCCCCCEECCC >Mature Secondary Structure TNPQGPPNQDPSTWGRPANQGPYGQPPTERPTERINTGGPGQAPGQVPPPPPAPAPPPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC GQTERFGAPRPQMQQPGYPPPPTPPAGPTERLATAPNPDNGPAKKKRRFLRDPVSVLLIF CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHCHHHHHHHH IIVFALLIAGFIGAELYVRHVADTKVAQAVACEVKDQATASFGVTPLMLWQQATKHYTNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHCE SVQTAGNNIRDAKGMKLSININDVRLKDNGNSKGTIGALDATIDWTTDGIKQSVQNAIPV EEEECCCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHH LGPFVTNTVTTHPADGTIELKGMLDNITAKPVISGTGLQLQIVSFNALGFTMPKESVQST HHHHHHCCEEECCCCCEEEEEEHHCCCCCCCEECCCCCEEEEEEECCCCCCCCHHHHHHH LDDFTSNLTKNYPLGIHADSVQVTDKGVTSHFSTRNAAIPTGNNNDPCFANL HHHHHHHHCCCCCCEEECCCEEECCCCCHHHHCCCCCCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]