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The map label for this gene is psd

Identifier: 41410028

GI number: 41410028

Start: 4390358

End: 4391080

Strand: Reverse

Name: psd

Synonym: MAP3930c

Alternate gene names: 41410028

Gene position: 4391080-4390358 (Counterclockwise)

Preceding gene: 41410030

Following gene: 41410027

Centisome position: 90.92

GC content: 75.93

Gene sequence:

>723_bases
GTGGCACGACGCCCCCGCACCATCGGCCCCTCGGCTGCCGACCCCGGTTTCAGCCCCCAGCATGCGCTGGAGTTGGTGCG
CTCCGCCATCCCGCCGGTGCATCCGGCCGGCCGGCCGTTCGTCGGCGCCGGGCTGGCGCTTGCGCTGGCCGGGCGCCGGC
ACCGCTGGCTGCGCCGGGCGGGCCTGCTGGCGGCGGGGGCGTGCGCGGGATTCTTCCGTCACCCGCCCCGGGTGCCGCCC
ACCCGGCCCGGCGCGATCGTCGCGCCCGCCGACGGCGAGATCTGCGTGATCGACGTCGCCACCCCGCCCGCCGAATTGAG
CATGGGTGACGTGGCGCTGCCGCGGGTCAGCATCTTCCTGTCGCTGCTGGACGCCCACGTGCAGCGGGCCCCGGTCAGCG
GCGAGGTGATCGACGTGCAGCACCGGCCGGGCCGGTTCGGGTCGGCCGACCTGGCGGCCGCGAGCACCGAGAACGAACGC
ACCAGCCTGCGCATCCGCACCCCCGGCGGCGCGGAGGTGGTCGCGGTCCAGGTCGCCGGGCTGCTGGCGCGGCGCATCAT
CTGCGACGCGCACGTCGGCGACAAGCTGTCGATCGGCGACACCTACGGCCTGATCCGGTTCGGCTCCCGGCTGGACACCT
ACCTGCCGGCGGGCGCACAGCCGCTGGTGACCGTCGGCCAACGCGCCATCGCCGGCGAGACCGTGCTGGCCGAGCTGCCA
TGA

Upstream 100 bases:

>100_bases
ACCGCGGTGACACCGCGTTTGGCCCGACTCAGCATGTCGACGGTGAACGTTCCCTTCGCGGGCGGCGACGAATCCGTCAC
CGGCTCCGTAAGATGGCCGC

Downstream 100 bases:

>100_bases
TCAGCAAGCCGCGCGGCCGCCGGGCGGTCAATCTGCAGATCCTGCCCAGCGCGATGACGGTGCTCTCGGTGTGCGCGGGG
CTGACCTCGATCCGGTTCGC

Product: phosphatidylserine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MARRPRTIGPSAADPGFSPQHALELVRSAIPPVHPAGRPFVGAGLALALAGRRHRWLRRAGLLAAGACAGFFRHPPRVPP
TRPGAIVAPADGEICVIDVATPPAELSMGDVALPRVSIFLSLLDAHVQRAPVSGEVIDVQHRPGRFGSADLAAASTENER
TSLRIRTPGGAEVVAVQVAGLLARRIICDAHVGDKLSIGDTYGLIRFGSRLDTYLPAGAQPLVTVGQRAIAGETVLAELP

Sequences:

>Translated_240_residues
MARRPRTIGPSAADPGFSPQHALELVRSAIPPVHPAGRPFVGAGLALALAGRRHRWLRRAGLLAAGACAGFFRHPPRVPP
TRPGAIVAPADGEICVIDVATPPAELSMGDVALPRVSIFLSLLDAHVQRAPVSGEVIDVQHRPGRFGSADLAAASTENER
TSLRIRTPGGAEVVAVQVAGLLARRIICDAHVGDKLSIGDTYGLIRFGSRLDTYLPAGAQPLVTVGQRAIAGETVLAELP
>Mature_239_residues
ARRPRTIGPSAADPGFSPQHALELVRSAIPPVHPAGRPFVGAGLALALAGRRHRWLRRAGLLAAGACAGFFRHPPRVPPT
RPGAIVAPADGEICVIDVATPPAELSMGDVALPRVSIFLSLLDAHVQRAPVSGEVIDVQHRPGRFGSADLAAASTENERT
SLRIRTPGGAEVVAVQVAGLLARRIICDAHVGDKLSIGDTYGLIRFGSRLDTYLPAGAQPLVTVGQRAIAGETVLAELP

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 3 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003817
- InterPro:   IPR004428 [H]

Pfam domain/function: PF02666 PS_Dcarbxylase [H]

EC number: =4.1.1.65 [H]

Molecular weight: Translated: 25051; Mature: 24920

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRPRTIGPSAADPGFSPQHALELVRSAIPPVHPAGRPFVGAGLALALAGRRHRWLRRA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
GLLAAGACAGFFRHPPRVPPTRPGAIVAPADGEICVIDVATPPAELSMGDVALPRVSIFL
CCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHH
SLLDAHVQRAPVSGEVIDVQHRPGRFGSADLAAASTENERTSLRIRTPGGAEVVAVQVAG
HHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEECCCCCCCEEEEEECCCCCEEHHHHHHH
LLARRIICDAHVGDKLSIGDTYGLIRFGSRLDTYLPAGAQPLVTVGQRAIAGETVLAELP
HHHHHHHHHCCCCCEEECCCCHHHHHHCCHHHHHCCCCCCHHHHHCCHHHCCCEEEEECC
>Mature Secondary Structure 
ARRPRTIGPSAADPGFSPQHALELVRSAIPPVHPAGRPFVGAGLALALAGRRHRWLRRA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
GLLAAGACAGFFRHPPRVPPTRPGAIVAPADGEICVIDVATPPAELSMGDVALPRVSIFL
CCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHH
SLLDAHVQRAPVSGEVIDVQHRPGRFGSADLAAASTENERTSLRIRTPGGAEVVAVQVAG
HHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEECCCCCCCEEEEEECCCCCEEHHHHHHH
LLARRIICDAHVGDKLSIGDTYGLIRFGSRLDTYLPAGAQPLVTVGQRAIAGETVLAELP
HHHHHHHHHCCCCCEEECCCCHHHHHHCCHHHHHCCCCCCHHHHHCCHHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA