The gene/protein map for NC_002944 is currently unavailable.
Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409986

Identifier: 41409986

GI number: 41409986

Start: 4350255

End: 4351637

Strand: Reverse

Name: 41409986

Synonym: MAP3888c

Alternate gene names: NA

Gene position: 4351637-4350255 (Counterclockwise)

Preceding gene: 41409991

Following gene: 41409985

Centisome position: 90.1

GC content: 71.95

Gene sequence:

>1383_bases
GTGGAACCTCAAGAAAATCGCAAGAACCCTCAGCGAATTTTCAGCTGCACACCGCACAGTTATTCCATGGCGGGGCAGTC
CACCCTGTGGGTCGGCACGGCGCGCATGCTGCGCCGGGCCGGTTTCGGCGTGACCGGCCCCGAGGTCGACGCCGCCGTCG
CCCGCGGCTGGCCCGGCCACCTGGACGCGATGCTGGCCGCCGATCCCGACGCCGACCCCGGCGCGCTGGCCACCCCGATG
CCCGCCCTGCCGGCGCCCCAGCCGCCCGGCAAACGCGCCACCCCCGCGGCCCGCAAGCAGTACAACCAGCAGCTCACCGA
ACAGCAGGGCGTGCTGTCGGATTGGTGGATCCGCCGCATGGTCGTCGTGCGCCAACCGTTCCACGAGAAGCTGACCTTGT
TGTGGCACAACCACTTTGCCACCTCGGCGCAGAAGGTGCGGGTGGCGGCGCAGATGGCCGCGCAGAACCAGAAGCTGCGC
ACGCTGTCGCTGGGCGATTTCCGCACCCTGGCCTACGCCATGCTGACCGACGCCGCCATGCTGCGCTGGCTGGACGGGCA
GACCAGCACCGCCAAGGCGCCCAACGAAAACCTGGCCCGCGAATTCATGGAGCTGTTCGCGCTGGGCCACGGCAACGGCT
ATACCGAGAGCGACGTCCGCAACGGGGCACGCGCCCTGACCGGCTGGGTCATCGGCGCCGGCGGCGCGACGTCGGTGCTG
CCCAAACGCCATGACGCGACGGCCAAGACGCTGTTCGGCCGCAGCGCGAACTTCGATGCCGCCGGGTTCTGCGACGCGGT
GCTCGCCCAGCCGAAATCGGCCGGGTACGTGGCGGGGCGGCTGTGGCAGCAGTTGGCCGGCGACGACCCGCCGTCGCCGC
CCGCGCTCGACCGGCTGGTCGCCGCCTACGGCCCCGGCCGCGACCTGCGCGCCCTGACCCGGGCCATCCTCACCGACCCG
GAGTTCACCGGCGCCCGGGCCAGCATGGTCAACACCCCGATCGAATGGCTGATCGGCGTGATCCGCTCGCTGCGGGTGCC
CGTCGATGATCCCAAGCGACTCAAGATGATCGACGCGACGTTGCGCACGCTGGGGCAGCGGCCGTTCTATCCGCCCAGCG
TCGGCGGCTGGCCCAGCGGGCAGGTCTGGCTGTCCACCGCCAGCGCCGGGGCCCGGCTGCGCGCCGCGACCGAGCTGGCG
CACGCCGGCGACCTGTCCGGCATCGAGAACACCCCGCCCACCGACCGCATCGACGCGGTCGGCTACCTGATCGGCGTCGG
CGCCTGGTCCGACCGCACCGCCCGCGCGCTGCAACCCCTGGTGGGCCAACCGCCCCGGCTGGTCGCCGCGGCCGTCAACA
CCCCGGAGTACCTGACGTCATGA

Upstream 100 bases:

>100_bases
CTAAACGGAACTCCGGTTCCGTGAACCGGCCCTCGGTCACTGTACAGCACGCGAACGGCGGCCGCGCGGCAGCGTCGGAT
CGCGCCGCATCGCGCCGCCC

Downstream 100 bases:

>100_bases
CCGAGATGAACCGTCGCAGATTCCTGATCGCCAGCGCGGGCGTGTCGGCGGCCGGGCTGCTGTCGTCGGCGGTGGCGGTC
GGTTGGCCCGACCTGATGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MEPQENRKNPQRIFSCTPHSYSMAGQSTLWVGTARMLRRAGFGVTGPEVDAAVARGWPGHLDAMLAADPDADPGALATPM
PALPAPQPPGKRATPAARKQYNQQLTEQQGVLSDWWIRRMVVVRQPFHEKLTLLWHNHFATSAQKVRVAAQMAAQNQKLR
TLSLGDFRTLAYAMLTDAAMLRWLDGQTSTAKAPNENLAREFMELFALGHGNGYTESDVRNGARALTGWVIGAGGATSVL
PKRHDATAKTLFGRSANFDAAGFCDAVLAQPKSAGYVAGRLWQQLAGDDPPSPPALDRLVAAYGPGRDLRALTRAILTDP
EFTGARASMVNTPIEWLIGVIRSLRVPVDDPKRLKMIDATLRTLGQRPFYPPSVGGWPSGQVWLSTASAGARLRAATELA
HAGDLSGIENTPPTDRIDAVGYLIGVGAWSDRTARALQPLVGQPPRLVAAAVNTPEYLTS

Sequences:

>Translated_460_residues
MEPQENRKNPQRIFSCTPHSYSMAGQSTLWVGTARMLRRAGFGVTGPEVDAAVARGWPGHLDAMLAADPDADPGALATPM
PALPAPQPPGKRATPAARKQYNQQLTEQQGVLSDWWIRRMVVVRQPFHEKLTLLWHNHFATSAQKVRVAAQMAAQNQKLR
TLSLGDFRTLAYAMLTDAAMLRWLDGQTSTAKAPNENLAREFMELFALGHGNGYTESDVRNGARALTGWVIGAGGATSVL
PKRHDATAKTLFGRSANFDAAGFCDAVLAQPKSAGYVAGRLWQQLAGDDPPSPPALDRLVAAYGPGRDLRALTRAILTDP
EFTGARASMVNTPIEWLIGVIRSLRVPVDDPKRLKMIDATLRTLGQRPFYPPSVGGWPSGQVWLSTASAGARLRAATELA
HAGDLSGIENTPPTDRIDAVGYLIGVGAWSDRTARALQPLVGQPPRLVAAAVNTPEYLTS
>Mature_460_residues
MEPQENRKNPQRIFSCTPHSYSMAGQSTLWVGTARMLRRAGFGVTGPEVDAAVARGWPGHLDAMLAADPDADPGALATPM
PALPAPQPPGKRATPAARKQYNQQLTEQQGVLSDWWIRRMVVVRQPFHEKLTLLWHNHFATSAQKVRVAAQMAAQNQKLR
TLSLGDFRTLAYAMLTDAAMLRWLDGQTSTAKAPNENLAREFMELFALGHGNGYTESDVRNGARALTGWVIGAGGATSVL
PKRHDATAKTLFGRSANFDAAGFCDAVLAQPKSAGYVAGRLWQQLAGDDPPSPPALDRLVAAYGPGRDLRALTRAILTDP
EFTGARASMVNTPIEWLIGVIRSLRVPVDDPKRLKMIDATLRTLGQRPFYPPSVGGWPSGQVWLSTASAGARLRAATELA
HAGDLSGIENTPPTDRIDAVGYLIGVGAWSDRTARALQPLVGQPPRLVAAAVNTPEYLTS

Specific function: Unknown

COG id: COG5267

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49585; Mature: 49585

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPQENRKNPQRIFSCTPHSYSMAGQSTLWVGTARMLRRAGFGVTGPEVDAAVARGWPGH
CCCCCCCCCHHHEEEECCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCH
LDAMLAADPDADPGALATPMPALPAPQPPGKRATPAARKQYNQQLTEQQGVLSDWWIRRM
HHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
VVVRQPFHEKLTLLWHNHFATSAQKVRVAAQMAAQNQKLRTLSLGDFRTLAYAMLTDAAM
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHH
LRWLDGQTSTAKAPNENLAREFMELFALGHGNGYTESDVRNGARALTGWVIGAGGATSVL
HHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCC
PKRHDATAKTLFGRSANFDAAGFCDAVLAQPKSAGYVAGRLWQQLAGDDPPSPPALDRLV
CCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHH
AAYGPGRDLRALTRAILTDPEFTGARASMVNTPIEWLIGVIRSLRVPVDDPKRLKMIDAT
HHCCCCHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
LRTLGQRPFYPPSVGGWPSGQVWLSTASAGARLRAATELAHAGDLSGIENTPPTDRIDAV
HHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
GYLIGVGAWSDRTARALQPLVGQPPRLVAAAVNTPEYLTS
HHHHCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHCC
>Mature Secondary Structure
MEPQENRKNPQRIFSCTPHSYSMAGQSTLWVGTARMLRRAGFGVTGPEVDAAVARGWPGH
CCCCCCCCCHHHEEEECCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCH
LDAMLAADPDADPGALATPMPALPAPQPPGKRATPAARKQYNQQLTEQQGVLSDWWIRRM
HHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
VVVRQPFHEKLTLLWHNHFATSAQKVRVAAQMAAQNQKLRTLSLGDFRTLAYAMLTDAAM
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHH
LRWLDGQTSTAKAPNENLAREFMELFALGHGNGYTESDVRNGARALTGWVIGAGGATSVL
HHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCC
PKRHDATAKTLFGRSANFDAAGFCDAVLAQPKSAGYVAGRLWQQLAGDDPPSPPALDRLV
CCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHH
AAYGPGRDLRALTRAILTDPEFTGARASMVNTPIEWLIGVIRSLRVPVDDPKRLKMIDAT
HHCCCCHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
LRTLGQRPFYPPSVGGWPSGQVWLSTASAGARLRAATELAHAGDLSGIENTPPTDRIDAV
HHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
GYLIGVGAWSDRTARALQPLVGQPPRLVAAAVNTPEYLTS
HHHHCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA