| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409936
Identifier: 41409936
GI number: 41409936
Start: 4294055
End: 4294690
Strand: Reverse
Name: 41409936
Synonym: MAP3838c
Alternate gene names: NA
Gene position: 4294690-4294055 (Counterclockwise)
Preceding gene: 41409937
Following gene: 41409935
Centisome position: 88.92
GC content: 69.18
Gene sequence:
>636_bases ATGCTGCCGGAACCTCCGGCACCGCACATATTGCGCTCGCTCGGCATCGGCGACGACGAGATGCGCGCGATCGGCGTCGA TGAGATCTGGTGGCGTGTCCATCGCACGGCGGGCGAGCACGTCTTGGCGTGGAATGCATTGCGCACCTTCGGGCCGGTGC TGCGGTTCGACCCGCACCCTCTCCCCAGGGGGGAGCATGCCCGGCATGGCGTTTGGTACGGAGCGTCAAGTCCGTGCGCC GCACTCGGCGAGGCATACCAAGTCGACCGGACCATTGACCGCGAACGCGGCCGCCCCTATCTGACCGGCTTGTCCTTCAC CCGCCCGCTGCGGGTCCTCGACCTCGCCGCTGACAGCCGAGGGGCGTGGGCCACCCGCGTCGGCGGCACGTTCGCCATTT CGACGGCCCGGCACACCGTGACTCAGCAATGGGCGCAACACATCACAGCCGCATTCCCCCATCTCGACGGCCTGCGCTAC AACAGCCGATTCGCCGGCGACCCATGCCTGGTGCTGTTCCCGCCGGCCGCATCCGCGATGCCGGCCAGGCCGAGATTGTC GCTACCCCTCGCCCATCCGGATCTGGCCGGCCGGGTCGCCGGTGCGGCGAAACGTCTCGGCTACGGCGTGGTGTGA
Upstream 100 bases:
>100_bases CGAAGTCGGTGCGGGACTGGCTGTTACACGGTGAATCCGTCGGGCCGGTACTCGAACTGATCGAGATCGCCGATTGGACC GCGACTTGACCGTCGACCCC
Downstream 100 bases:
>100_bases CGGCGTCGACGCGTCGATCACGCCGCGATAAAACTTCACCATCGGCGCCGCATCGATGCCCGCCGCGCCGCAGCGACCAC CGCCGCGGTATGCGTAACCT
Product: hypothetical protein
Products: NA
Alternate protein names: RES Domain Protein
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MLPEPPAPHILRSLGIGDDEMRAIGVDEIWWRVHRTAGEHVLAWNALRTFGPVLRFDPHPLPRGEHARHGVWYGASSPCA ALGEAYQVDRTIDRERGRPYLTGLSFTRPLRVLDLAADSRGAWATRVGGTFAISTARHTVTQQWAQHITAAFPHLDGLRY NSRFAGDPCLVLFPPAASAMPARPRLSLPLAHPDLAGRVAGAAKRLGYGVV
Sequences:
>Translated_211_residues MLPEPPAPHILRSLGIGDDEMRAIGVDEIWWRVHRTAGEHVLAWNALRTFGPVLRFDPHPLPRGEHARHGVWYGASSPCA ALGEAYQVDRTIDRERGRPYLTGLSFTRPLRVLDLAADSRGAWATRVGGTFAISTARHTVTQQWAQHITAAFPHLDGLRY NSRFAGDPCLVLFPPAASAMPARPRLSLPLAHPDLAGRVAGAAKRLGYGVV >Mature_211_residues MLPEPPAPHILRSLGIGDDEMRAIGVDEIWWRVHRTAGEHVLAWNALRTFGPVLRFDPHPLPRGEHARHGVWYGASSPCA ALGEAYQVDRTIDRERGRPYLTGLSFTRPLRVLDLAADSRGAWATRVGGTFAISTARHTVTQQWAQHITAAFPHLDGLRY NSRFAGDPCLVLFPPAASAMPARPRLSLPLAHPDLAGRVAGAAKRLGYGVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23098; Mature: 23098
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPEPPAPHILRSLGIGDDEMRAIGVDEIWWRVHRTAGEHVLAWNALRTFGPVLRFDPHP CCCCCCCHHHHHHHCCCCHHHEECCHHHHHHHHHHCCCCEEEEHHHHHHHCCHHCCCCCC LPRGEHARHGVWYGASSPCAALGEAYQVDRTIDRERGRPYLTGLSFTRPLRVLDLAADSR CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEECCCCC GAWATRVGGTFAISTARHTVTQQWAQHITAAFPHLDGLRYNSRFAGDPCLVLFPPAASAM CCEEEECCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCC PARPRLSLPLAHPDLAGRVAGAAKRLGYGVV CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLPEPPAPHILRSLGIGDDEMRAIGVDEIWWRVHRTAGEHVLAWNALRTFGPVLRFDPHP CCCCCCCHHHHHHHCCCCHHHEECCHHHHHHHHHHCCCCEEEEHHHHHHHCCHHCCCCCC LPRGEHARHGVWYGASSPCAALGEAYQVDRTIDRERGRPYLTGLSFTRPLRVLDLAADSR CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEECCCCC GAWATRVGGTFAISTARHTVTQQWAQHITAAFPHLDGLRYNSRFAGDPCLVLFPPAASAM CCEEEECCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCC PARPRLSLPLAHPDLAGRVAGAAKRLGYGVV CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA