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The map label for this gene is aspC

Identifier: 41409928

GI number: 41409928

Start: 4280995

End: 4282287

Strand: Reverse

Name: aspC

Synonym: MAP3830c

Alternate gene names: 41409928

Gene position: 4282287-4280995 (Counterclockwise)

Preceding gene: 41409929

Following gene: 41409927

Centisome position: 88.66

GC content: 67.36

Gene sequence:

>1293_bases
GTGGACAGTGATGGCACCATTGGTGGTGTGACAACCCACCAGCTGCCTGTGCACTCGTCCGCGCACCATCGCCAGCAGCG
TACTTTCGCCCAGTCGTCCAAGCTCCAGGACGTCCTGTACGAGATCCGCGGCCCGGTACATCAGCACGCGGCGCGGCTGG
AGGCCGAGGGACACCGCATCCTCAAGCTCAACATCGGCAACCCGGCGCCGTTCGGCTTCGAGGCGCCCGACGTCATCATG
CGCGACATGATCCAGGCCCTGCCGTACGCCCAGGGCTACTCCGACTCGCAGGGCATCCTGCCCGCGCGCCGGGCGGTGGT
CACCCGCTACGAGTTGGTCGACGGGTTCCCCCGCTTCGACGTCGACGATGTCTACCTGGGCAACGGCGTGTCCGAACTGA
TCACGATGACGCTGCAGGCGCTGCTCGACAACGGCGACGAGGTGCTGATCCCGTCGCCGGACTACCCGCTGTGGACGGCG
TCGACCTCGCTGGCCGGCGGCACCCCCGTGCACTACCTGTGCGACGAGACGCAGGGCTGGCAGCCCGACATCGCCGATCT
GGAATCCAAGATCACCGAGCGCACCAAGGCGCTGGTGGTGATCAACCCGAACAACCCGACCGGCGCGGTGTACAGCGGCG
AAATCCTGAGCCAGATGGTCGATCTGGCGCGCAAGCACGAGCTGCTGCTGCTGGCCGACGAGATCTACGACAAGATCCTC
TACGACGACGCCAAGCACATCAACGTGGCGTCGCTGGCGCCGGACATGCTGTGCCTGACCTTCAACGGCCTGTCGAAGGC
GTACCGGGTGGCCGGCTACCGGGCCGGCTGGCTGGCGATCACCGGACCCAAGGACCACGCCGGCAGCTTCATCGAGGGCA
TCAACCTGCTGGCCAACATGCGGCTGTGCCCGAACGTCCCGGCGCAGCATGCGATCCAGGTGGCCCTGGGCGGCCACCAG
AGCATCGAGGACCTGGTGCTGCCGGGCGGGCGGCTGCTCGAGCAGCGCGACGTGGCGTGGAGCAAGCTCAACGAGATCCC
CGGGGTGTCCTGCGTCAAACCCGCCGGCGCCTTGTACGCGTTTCCCCGGCTGGACCCCGAGGTCTACGACATCACCGACG
ACGAGCAGCTGGTGCTCGACCTGCTGCTGCAGGAGAAGATCCTGGTCACCCACGGCACCGGCTTCAACTGGCCGGCGCCG
GATCACCTGCGCATCGTGACGCTGCCGTGGGCGCGGGACCTGGCCGCCGCGATCGAGCGGCTGGGCAACTTCCTGGTCGG
CTATCGACAGTAA

Upstream 100 bases:

>100_bases
CACCGTCGCAGCCACCGGTCAAGGGACTGGGCATCGCCCGCGGGGCGCGTCCACCGGGCAAGCGCTGAGCTGGCAATTTC
GGGCTTGACAGCAAATTTCA

Downstream 100 bases:

>100_bases
GCACCCAGCCGGGCGCCTCTACGGTGGAGCGCGTGACGCACTCCCACTCCCACGGCCTGCCGTCGGGCCCGGCCCCCGTC
GATCGGTTGCCCGCCCGCAT

Product: aminotransferase AlaT

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MDSDGTIGGVTTHQLPVHSSAHHRQQRTFAQSSKLQDVLYEIRGPVHQHAARLEAEGHRILKLNIGNPAPFGFEAPDVIM
RDMIQALPYAQGYSDSQGILPARRAVVTRYELVDGFPRFDVDDVYLGNGVSELITMTLQALLDNGDEVLIPSPDYPLWTA
STSLAGGTPVHYLCDETQGWQPDIADLESKITERTKALVVINPNNPTGAVYSGEILSQMVDLARKHELLLLADEIYDKIL
YDDAKHINVASLAPDMLCLTFNGLSKAYRVAGYRAGWLAITGPKDHAGSFIEGINLLANMRLCPNVPAQHAIQVALGGHQ
SIEDLVLPGGRLLEQRDVAWSKLNEIPGVSCVKPAGALYAFPRLDPEVYDITDDEQLVLDLLLQEKILVTHGTGFNWPAP
DHLRIVTLPWARDLAAAIERLGNFLVGYRQ

Sequences:

>Translated_430_residues
MDSDGTIGGVTTHQLPVHSSAHHRQQRTFAQSSKLQDVLYEIRGPVHQHAARLEAEGHRILKLNIGNPAPFGFEAPDVIM
RDMIQALPYAQGYSDSQGILPARRAVVTRYELVDGFPRFDVDDVYLGNGVSELITMTLQALLDNGDEVLIPSPDYPLWTA
STSLAGGTPVHYLCDETQGWQPDIADLESKITERTKALVVINPNNPTGAVYSGEILSQMVDLARKHELLLLADEIYDKIL
YDDAKHINVASLAPDMLCLTFNGLSKAYRVAGYRAGWLAITGPKDHAGSFIEGINLLANMRLCPNVPAQHAIQVALGGHQ
SIEDLVLPGGRLLEQRDVAWSKLNEIPGVSCVKPAGALYAFPRLDPEVYDITDDEQLVLDLLLQEKILVTHGTGFNWPAP
DHLRIVTLPWARDLAAAIERLGNFLVGYRQ
>Mature_430_residues
MDSDGTIGGVTTHQLPVHSSAHHRQQRTFAQSSKLQDVLYEIRGPVHQHAARLEAEGHRILKLNIGNPAPFGFEAPDVIM
RDMIQALPYAQGYSDSQGILPARRAVVTRYELVDGFPRFDVDDVYLGNGVSELITMTLQALLDNGDEVLIPSPDYPLWTA
STSLAGGTPVHYLCDETQGWQPDIADLESKITERTKALVVINPNNPTGAVYSGEILSQMVDLARKHELLLLADEIYDKIL
YDDAKHINVASLAPDMLCLTFNGLSKAYRVAGYRAGWLAITGPKDHAGSFIEGINLLANMRLCPNVPAQHAIQVALGGHQ
SIEDLVLPGGRLLEQRDVAWSKLNEIPGVSCVKPAGALYAFPRLDPEVYDITDDEQLVLDLLLQEKILVTHGTGFNWPAP
DHLRIVTLPWARDLAAAIERLGNFLVGYRQ

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI19263340, Length=481, Percent_Identity=25.3638253638254, Blast_Score=146, Evalue=5e-35,
Organism=Homo sapiens, GI4507369, Length=379, Percent_Identity=29.023746701847, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI215599424, Length=373, Percent_Identity=27.6139410187668, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI4885351, Length=435, Percent_Identity=27.3563218390805, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI95147551, Length=247, Percent_Identity=30.7692307692308, Blast_Score=106, Evalue=4e-23,
Organism=Homo sapiens, GI169881279, Length=247, Percent_Identity=30.7692307692308, Blast_Score=106, Evalue=4e-23,
Organism=Homo sapiens, GI56713254, Length=152, Percent_Identity=34.2105263157895, Blast_Score=96, Evalue=8e-20,
Organism=Homo sapiens, GI56713256, Length=152, Percent_Identity=34.2105263157895, Blast_Score=96, Evalue=9e-20,
Organism=Homo sapiens, GI169881281, Length=151, Percent_Identity=35.7615894039735, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI149944424, Length=333, Percent_Identity=24.024024024024, Blast_Score=76, Evalue=5e-14,
Organism=Escherichia coli, GI1788627, Length=400, Percent_Identity=60.5, Blast_Score=536, Evalue=1e-154,
Organism=Escherichia coli, GI1788722, Length=400, Percent_Identity=26.75, Blast_Score=106, Evalue=4e-24,
Organism=Escherichia coli, GI1786816, Length=304, Percent_Identity=24.3421052631579, Blast_Score=83, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17567663, Length=381, Percent_Identity=29.6587926509186, Blast_Score=162, Evalue=4e-40,
Organism=Caenorhabditis elegans, GI71981209, Length=510, Percent_Identity=24.9019607843137, Blast_Score=115, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI71994472, Length=184, Percent_Identity=34.7826086956522, Blast_Score=104, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI71994476, Length=184, Percent_Identity=34.7826086956522, Blast_Score=104, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI71981215, Length=336, Percent_Identity=26.7857142857143, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17567369, Length=165, Percent_Identity=32.1212121212121, Blast_Score=96, Evalue=3e-20,
Organism=Saccharomyces cerevisiae, GI6323118, Length=457, Percent_Identity=26.2582056892779, Blast_Score=127, Evalue=4e-30,
Organism=Saccharomyces cerevisiae, GI6320317, Length=474, Percent_Identity=25.7383966244726, Blast_Score=125, Evalue=9e-30,
Organism=Saccharomyces cerevisiae, GI6322401, Length=237, Percent_Identity=26.1603375527426, Blast_Score=98, Evalue=3e-21,
Organism=Drosophila melanogaster, GI18859735, Length=377, Percent_Identity=29.973474801061, Blast_Score=155, Evalue=4e-38,
Organism=Drosophila melanogaster, GI24641770, Length=459, Percent_Identity=26.3616557734205, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24641760, Length=459, Percent_Identity=26.3616557734205, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24641768, Length=459, Percent_Identity=26.3616557734205, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24641766, Length=459, Percent_Identity=26.3616557734205, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24641764, Length=459, Percent_Identity=26.3616557734205, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI45551451, Length=459, Percent_Identity=26.3616557734205, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI28573069, Length=262, Percent_Identity=26.7175572519084, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24646114, Length=262, Percent_Identity=26.7175572519084, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI28573067, Length=262, Percent_Identity=26.7175572519084, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI28573065, Length=262, Percent_Identity=26.7175572519084, Blast_Score=95, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 47281; Mature: 47281

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSDGTIGGVTTHQLPVHSSAHHRQQRTFAQSSKLQDVLYEIRGPVHQHAARLEAEGHRI
CCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEE
LKLNIGNPAPFGFEAPDVIMRDMIQALPYAQGYSDSQGILPARRAVVTRYELVDGFPRFD
EEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
VDDVYLGNGVSELITMTLQALLDNGDEVLIPSPDYPLWTASTSLAGGTPVHYLCDETQGW
CCCEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCEEECCCCCCCCCCEEEEECCCCCC
QPDIADLESKITERTKALVVINPNNPTGAVYSGEILSQMVDLARKHELLLLADEIYDKIL
CCCHHHHHHHHHHHHCEEEEECCCCCCCCEECHHHHHHHHHHHHHCCEEEEHHHHHHHHH
YDDAKHINVASLAPDMLCLTFNGLSKAYRVAGYRAGWLAITGPKDHAGSFIEGINLLANM
HCCCCCCCHHHCCCCEEEEEEHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCC
RLCPNVPAQHAIQVALGGHQSIEDLVLPGGRLLEQRDVAWSKLNEIPGVSCVKPAGALYA
CCCCCCCHHHEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCEEE
FPRLDPEVYDITDDEQLVLDLLLQEKILVTHGTGFNWPAPDHLRIVTLPWARDLAAAIER
CCCCCCCEEECCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHH
LGNFLVGYRQ
HHHHHHCCCC
>Mature Secondary Structure
MDSDGTIGGVTTHQLPVHSSAHHRQQRTFAQSSKLQDVLYEIRGPVHQHAARLEAEGHRI
CCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEE
LKLNIGNPAPFGFEAPDVIMRDMIQALPYAQGYSDSQGILPARRAVVTRYELVDGFPRFD
EEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
VDDVYLGNGVSELITMTLQALLDNGDEVLIPSPDYPLWTASTSLAGGTPVHYLCDETQGW
CCCEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCEEECCCCCCCCCCEEEEECCCCCC
QPDIADLESKITERTKALVVINPNNPTGAVYSGEILSQMVDLARKHELLLLADEIYDKIL
CCCHHHHHHHHHHHHCEEEEECCCCCCCCEECHHHHHHHHHHHHHCCEEEEHHHHHHHHH
YDDAKHINVASLAPDMLCLTFNGLSKAYRVAGYRAGWLAITGPKDHAGSFIEGINLLANM
HCCCCCCCHHHCCCCEEEEEEHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCC
RLCPNVPAQHAIQVALGGHQSIEDLVLPGGRLLEQRDVAWSKLNEIPGVSCVKPAGALYA
CCCCCCCHHHEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCEEE
FPRLDPEVYDITDDEQLVLDLLLQEKILVTHGTGFNWPAPDHLRIVTLPWARDLAAAIER
CCCCCCCEEECCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHH
LGNFLVGYRQ
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]