| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409908
Identifier: 41409908
GI number: 41409908
Start: 4257696
End: 4258130
Strand: Reverse
Name: 41409908
Synonym: MAP3810c
Alternate gene names: NA
Gene position: 4258130-4257696 (Counterclockwise)
Preceding gene: 41409910
Following gene: 41409907
Centisome position: 88.16
GC content: 69.43
Gene sequence:
>435_bases GTGTTTGCGCGGCGGTTTTTCGCACTTCTGTGTCAAAGTGCATCATCCGCATCGGGCACAGACGAAGGAGAAGGTTGGAT GGCGGCACGCAGGCTGGTTGGCCGGGTAACGGGCGCGGCGCTGACGGCGGGCCCACTGGTGCTGGCGGGGATGCTGACGG CGACCGTGACGGCCGGCCCGGCGCGGGCGGACCAGGCCGCCTTCCTCAACGACCTGCACAACGCCGGGATCCATGCCGTC AACGGCGGCGACGACGCGCTCCTGCAAATGGGCGCGGATTTGTGCCAACAGCTGTCCTGGGGGGCATCTCCCCAGCAGCT GGAGGGGCTCGCGCTGCAGCGCTCCGACGCCGACCAGGGCACCGGCGGCATCAACGGCCGGCAGGCCGCGGACGTGGTGA TCTTCGCGTTGCGCGATCTGTGCCCCAACGCCTAG
Upstream 100 bases:
>100_bases CCCAGCTAGCACCGCCTAGCCCCGCTAGGTAGGCCCGAGTGGACGGTCGCCGCGTGCCGCGACCGCCCACTCCTCTTCGC CGACTGTTCATCCTCCGGAT
Downstream 100 bases:
>100_bases CACCGGCCCGGTCGCGACCCAGGCGTCCGGTCCAGGCTAGGGTGACAGTCGAGTGAAGCTGAACGCACATAACCTGACCG GTCTCAAAATCCCCGTCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MFARRFFALLCQSASSASGTDEGEGWMAARRLVGRVTGAALTAGPLVLAGMLTATVTAGPARADQAAFLNDLHNAGIHAV NGGDDALLQMGADLCQQLSWGASPQQLEGLALQRSDADQGTGGINGRQAADVVIFALRDLCPNA
Sequences:
>Translated_144_residues MFARRFFALLCQSASSASGTDEGEGWMAARRLVGRVTGAALTAGPLVLAGMLTATVTAGPARADQAAFLNDLHNAGIHAV NGGDDALLQMGADLCQQLSWGASPQQLEGLALQRSDADQGTGGINGRQAADVVIFALRDLCPNA >Mature_144_residues MFARRFFALLCQSASSASGTDEGEGWMAARRLVGRVTGAALTAGPLVLAGMLTATVTAGPARADQAAFLNDLHNAGIHAV NGGDDALLQMGADLCQQLSWGASPQQLEGLALQRSDADQGTGGINGRQAADVVIFALRDLCPNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14753; Mature: 14753
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFARRFFALLCQSASSASGTDEGEGWMAARRLVGRVTGAALTAGPLVLAGMLTATVTAGP CHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ARADQAAFLNDLHNAGIHAVNGGDDALLQMGADLCQQLSWGASPQQLEGLALQRSDADQG CCHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCC TGGINGRQAADVVIFALRDLCPNA CCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFARRFFALLCQSASSASGTDEGEGWMAARRLVGRVTGAALTAGPLVLAGMLTATVTAGP CHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ARADQAAFLNDLHNAGIHAVNGGDDALLQMGADLCQQLSWGASPQQLEGLALQRSDADQG CCHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCC TGGINGRQAADVVIFALRDLCPNA CCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA