| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is por [H]
Identifier: 41409907
GI number: 41409907
Start: 4256240
End: 4257643
Strand: Reverse
Name: por [H]
Synonym: MAP3809c
Alternate gene names: 41409907
Gene position: 4257643-4256240 (Counterclockwise)
Preceding gene: 41409908
Following gene: 41409906
Centisome position: 88.15
GC content: 68.45
Gene sequence:
>1404_bases GTGAAGCTGAACGCACATAACCTGACCGGTCTCAAAATCCCCGTCCCGACCTATGACCGTAGCCAAATCGGCATCGGCAT AGCGCATTTCGGCGTCGGGGGTTTTCATCGTGCCCACCAGGCCATGTATCTGGACCGCTTGCTGAACGACGGTCTCGCCC GGGACTGGGGCATCTGCGGTATCGGCGTGCTGCCCGACGACCGGCGCATGCGCGACGCGCTGCGCAGCCAGGACTACCTC TACACGCTGATCCTGGAACATCCCGACGGCACCCAGGAGCCGCGCGTCATCGGATCCATCGTCGACTTCCGTTACGCGCC TGAGGATCCCGGTTCCGTCGTCGATCTGCTGGCCGATCCCGCCACCCGGATCATCTCGCTCACCATCACCGAGGGCGGCT ACCAGCCGCCGCTCAGCGCGGCGTTCGAGTTGGTGGCCGAGGCGCTGAATCGGCGACGGGAGCGTGGCCTGCCCTCTCCG ACGATCGTCTCCTGCGACAACATCATCAAAAACGGAGACGTGGCCCGGCGCGCCTTCACTGCCCACGCCGAGCAGGTCAA TCCCGAACTCGCGCAATGGATACGGGAGAACACCACCTTCCCCAACTCGATGGTCGACCGGATCACCCCGACGCCCACAC CAGACCTCGTCGACCGGTTGGCCGCCGAGTTCGGCGTGCAGGACGCCGAGCCGGTGGTGGCCGAGCCGTTCGCCATGTGG GTGCTCGAGGACGACTTCGCCGACGGGCGGCCCCCGCTGGACAAGGCCGGCGTGCGGCTGGTCGACGACGTGGCGCCCTA CGAGGCGATCAAGCTGCGGCTGCTCAACGCCGGCCATCAAGGCCTGTGCTATTTCGCCTACCTGGCCGGATACCGCGAGG TGCACGAGGCCGCGCAGGATCCGGTGATCGCGGAATTCCTTGCCCGCTACATGGATTCGGAGGCGATGCCGACGCTGCCG CGGATGCCCGGCCTGGAAGACTTCCGCGACGGCCTCATCCCCCGCTTCGCCAACGCCTATGTGGGCGACCAGGTGGCCCG GCTGTGCGCGGACTCCTCCGACCACATCCCGAAGTGGCTGTTGCCGGTGGTGCACGACAACCTGCGCTCCGGCGGCCCGG TGCAGCTGTCCGCGGCGATCGTCGCGAGCTGGGCTCGCTACGCCGAGGGCGTCGACGAACAGGGCCGCCCGATCGAGGTG GTGGACCGGCTCGCCGACACCCTGGTGCCGCTCGCCCGCTCGCAGCGCGAGAATCCGGACGCGTTTCTGGCCAACCGTGC CGTGTTCGGCGACCTGATCGACGCACCGCGCTTCCGCGAGGCCTACCGGTGGGCCCTGGACTCGCTGCACCGGCGCGGCG CGCGCGCGACGTTGCGGGCGCTGATCGGGGCCGACGGGTCGTGA
Upstream 100 bases:
>100_bases GCGGACGTGGTGATCTTCGCGTTGCGCGATCTGTGCCCCAACGCCTAGCACCGGCCCGGTCGCGACCCAGGCGTCCGGTC CAGGCTAGGGTGACAGTCGA
Downstream 100 bases:
>100_bases GCCTGGTCGCGGGCATCGACCCGGGCACGGACCCCGCGGCCTGACCTAGGCTGGACGGGGAACAGCCAAAGACATGGACG CACAGGGCTATTGCGCGCGG
Product: hypothetical protein
Products: D-fructose; NADH; H+
Alternate protein names: NA
Number of amino acids: Translated: 467; Mature: 467
Protein sequence:
>467_residues MKLNAHNLTGLKIPVPTYDRSQIGIGIAHFGVGGFHRAHQAMYLDRLLNDGLARDWGICGIGVLPDDRRMRDALRSQDYL YTLILEHPDGTQEPRVIGSIVDFRYAPEDPGSVVDLLADPATRIISLTITEGGYQPPLSAAFELVAEALNRRRERGLPSP TIVSCDNIIKNGDVARRAFTAHAEQVNPELAQWIRENTTFPNSMVDRITPTPTPDLVDRLAAEFGVQDAEPVVAEPFAMW VLEDDFADGRPPLDKAGVRLVDDVAPYEAIKLRLLNAGHQGLCYFAYLAGYREVHEAAQDPVIAEFLARYMDSEAMPTLP RMPGLEDFRDGLIPRFANAYVGDQVARLCADSSDHIPKWLLPVVHDNLRSGGPVQLSAAIVASWARYAEGVDEQGRPIEV VDRLADTLVPLARSQRENPDAFLANRAVFGDLIDAPRFREAYRWALDSLHRRGARATLRALIGADGS
Sequences:
>Translated_467_residues MKLNAHNLTGLKIPVPTYDRSQIGIGIAHFGVGGFHRAHQAMYLDRLLNDGLARDWGICGIGVLPDDRRMRDALRSQDYL YTLILEHPDGTQEPRVIGSIVDFRYAPEDPGSVVDLLADPATRIISLTITEGGYQPPLSAAFELVAEALNRRRERGLPSP TIVSCDNIIKNGDVARRAFTAHAEQVNPELAQWIRENTTFPNSMVDRITPTPTPDLVDRLAAEFGVQDAEPVVAEPFAMW VLEDDFADGRPPLDKAGVRLVDDVAPYEAIKLRLLNAGHQGLCYFAYLAGYREVHEAAQDPVIAEFLARYMDSEAMPTLP RMPGLEDFRDGLIPRFANAYVGDQVARLCADSSDHIPKWLLPVVHDNLRSGGPVQLSAAIVASWARYAEGVDEQGRPIEV VDRLADTLVPLARSQRENPDAFLANRAVFGDLIDAPRFREAYRWALDSLHRRGARATLRALIGADGS >Mature_467_residues MKLNAHNLTGLKIPVPTYDRSQIGIGIAHFGVGGFHRAHQAMYLDRLLNDGLARDWGICGIGVLPDDRRMRDALRSQDYL YTLILEHPDGTQEPRVIGSIVDFRYAPEDPGSVVDLLADPATRIISLTITEGGYQPPLSAAFELVAEALNRRRERGLPSP TIVSCDNIIKNGDVARRAFTAHAEQVNPELAQWIRENTTFPNSMVDRITPTPTPDLVDRLAAEFGVQDAEPVVAEPFAMW VLEDDFADGRPPLDKAGVRLVDDVAPYEAIKLRLLNAGHQGLCYFAYLAGYREVHEAAQDPVIAEFLARYMDSEAMPTLP RMPGLEDFRDGLIPRFANAYVGDQVARLCADSSDHIPKWLLPVVHDNLRSGGPVQLSAAIVASWARYAEGVDEQGRPIEV VDRLADTLVPLARSQRENPDAFLANRAVFGDLIDAPRFREAYRWALDSLHRRGARATLRALIGADGS
Specific function: Unknown
COG id: COG0246
COG function: function code G; Mannitol-1-phosphate/altronate dehydrogenases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannitol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788497, Length=473, Percent_Identity=37.4207188160677, Blast_Score=293, Evalue=2e-80, Organism=Escherichia coli, GI1790779, Length=486, Percent_Identity=37.2427983539095, Blast_Score=293, Evalue=2e-80, Organism=Escherichia coli, GI1787823, Length=482, Percent_Identity=36.7219917012448, Blast_Score=281, Evalue=8e-77, Organism=Escherichia coli, GI48994885, Length=402, Percent_Identity=26.3681592039801, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1790028, Length=210, Percent_Identity=26.6666666666667, Blast_Score=74, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6324401, Length=489, Percent_Identity=38.8548057259714, Blast_Score=357, Evalue=2e-99, Organism=Saccharomyces cerevisiae, GI6320765, Length=489, Percent_Identity=38.8548057259714, Blast_Score=357, Evalue=2e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR000669 - InterPro: IPR013118 - InterPro: IPR013131 - InterPro: IPR016040 [H]
Pfam domain/function: PF01232 Mannitol_dh; PF08125 Mannitol_dh_C [H]
EC number: 1.1.1.67
Molecular weight: Translated: 51609; Mature: 51609
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLNAHNLTGLKIPVPTYDRSQIGIGIAHFGVGGFHRAHQAMYLDRLLNDGLARDWGICG CCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEE IGVLPDDRRMRDALRSQDYLYTLILEHPDGTQEPRVIGSIVDFRYAPEDPGSVVDLLADP ECCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHCC ATRIISLTITEGGYQPPLSAAFELVAEALNRRRERGLPSPTIVSCDNIIKNGDVARRAFT CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHCCCHHHHHHHH AHAEQVNPELAQWIRENTTFPNSMVDRITPTPTPDLVDRLAAEFGVQDAEPVVAEPFAMW HHHHHCCHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHCCCEEE VLEDDFADGRPPLDKAGVRLVDDVAPYEAIKLRLLNAGHQGLCYFAYLAGYREVHEAAQD EEECCCCCCCCCHHHHCCCHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC PVIAEFLARYMDSEAMPTLPRMPGLEDFRDGLIPRFANAYVGDQVARLCADSSDHIPKWL CHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH LPVVHDNLRSGGPVQLSAAIVASWARYAEGVDEQGRPIEVVDRLADTLVPLARSQRENPD HHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC AFLANRAVFGDLIDAPRFREAYRWALDSLHRRGARATLRALIGADGS HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC >Mature Secondary Structure MKLNAHNLTGLKIPVPTYDRSQIGIGIAHFGVGGFHRAHQAMYLDRLLNDGLARDWGICG CCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEE IGVLPDDRRMRDALRSQDYLYTLILEHPDGTQEPRVIGSIVDFRYAPEDPGSVVDLLADP ECCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHCC ATRIISLTITEGGYQPPLSAAFELVAEALNRRRERGLPSPTIVSCDNIIKNGDVARRAFT CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHCCCHHHHHHHH AHAEQVNPELAQWIRENTTFPNSMVDRITPTPTPDLVDRLAAEFGVQDAEPVVAEPFAMW HHHHHCCHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHCCCEEE VLEDDFADGRPPLDKAGVRLVDDVAPYEAIKLRLLNAGHQGLCYFAYLAGYREVHEAAQD EEECCCCCCCCCHHHHCCCHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC PVIAEFLARYMDSEAMPTLPRMPGLEDFRDGLIPRFANAYVGDQVARLCADSSDHIPKWL CHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH LPVVHDNLRSGGPVQLSAAIVASWARYAEGVDEQGRPIEVVDRLADTLVPLARSQRENPD HHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC AFLANRAVFGDLIDAPRFREAYRWALDSLHRRGARATLRALIGADGS HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: D-mannitol; NAD+
Specific reaction: D-mannitol + NAD+ = D-fructose + NADH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA