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The map label for this gene is fadD27

Identifier: 41409821

GI number: 41409821

Start: 4143149

End: 4143802

Strand: Reverse

Name: fadD27

Synonym: MAP3723c

Alternate gene names: NA

Gene position: 4143802-4143149 (Counterclockwise)

Preceding gene: 41409829

Following gene: 41409816

Centisome position: 85.8

GC content: 71.25

Gene sequence:

>654_bases
ATGAGCGATACGTCCAGCGCGCGGCCGTATCGCGGGGTGGAGGCCGCCGAACGCCTCGCCACCCGCCGAAACCGGCTCCT
GGCCGCCGGCCTGGACCTGCTCGGCGATCAGCGGCCGGACATCTCGGCGGTCACCGTCCGCGGGGTGTGCCGCCGCGCCG
GGCTGGCGGCCCGGTACTTCTACGAGAGCTTCACCGACAAGGACGAATTCGTCTCCTGCGTCTTCGACTGGGTGGTCGCC
GAGCTGGCCGCCACCACGCAGGCCGCGGTCGCCACGGTGCCCGCCGACGAGCAGACCCGCGCGGGCATCGCCAACATCGT
GCGGACCATCACCGACGACGCCCGCGTCGGCCGCCTGTTGTTCAGCACGCAGCTGGCCGACCCCGTGGTGGTGCGCAAAC
GCGCCGAGTCCAGCGCCCTGTTCGCGATGCTGTCCGGCCAGCACGTCGGCAACGCGCTTCAGGTGCCGGCAAACGATCGC
ATCAAGGCCGCAGCGCACTTCGTGGTCGGCGGGGTCGGGCAGACCATCAGCGCCTGGCTGGCCGGCGACGTCCGGCTCGA
ACCGGATGAGCTCGTCGATCACCTGGCCGCCCTGCTCGACGAGCTTGCCGAGCCAAACCTCTACCGGCTCACCGAAACAC
GGGCCGAGGCCTAG

Upstream 100 bases:

>100_bases
GAATTGCCATCGTCAGATCCTCCCGCAGCGCGGCCGCTAATGTGCGAACGCTTGTTTCCTGATATTGTCGCGCCGCGGCG
TTAGTGTCAAGATGGTCCGC

Downstream 100 bases:

>100_bases
CGCCTCACACGGGGCAGACCGTGTGCCAGCCCGTTGTGGCGGCCAGCGAGAAGTCGCTCAGCGTCTTGGAAAGCGCTTGT
CGCAGACCCTCGTTCGAATT

Product: FadD27

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; FadD27 Protein

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MSDTSSARPYRGVEAAERLATRRNRLLAAGLDLLGDQRPDISAVTVRGVCRRAGLAARYFYESFTDKDEFVSCVFDWVVA
ELAATTQAAVATVPADEQTRAGIANIVRTITDDARVGRLLFSTQLADPVVVRKRAESSALFAMLSGQHVGNALQVPANDR
IKAAAHFVVGGVGQTISAWLAGDVRLEPDELVDHLAALLDELAEPNLYRLTETRAEA

Sequences:

>Translated_217_residues
MSDTSSARPYRGVEAAERLATRRNRLLAAGLDLLGDQRPDISAVTVRGVCRRAGLAARYFYESFTDKDEFVSCVFDWVVA
ELAATTQAAVATVPADEQTRAGIANIVRTITDDARVGRLLFSTQLADPVVVRKRAESSALFAMLSGQHVGNALQVPANDR
IKAAAHFVVGGVGQTISAWLAGDVRLEPDELVDHLAALLDELAEPNLYRLTETRAEA
>Mature_216_residues
SDTSSARPYRGVEAAERLATRRNRLLAAGLDLLGDQRPDISAVTVRGVCRRAGLAARYFYESFTDKDEFVSCVFDWVVAE
LAATTQAAVATVPADEQTRAGIANIVRTITDDARVGRLLFSTQLADPVVVRKRAESSALFAMLSGQHVGNALQVPANDRI
KAAAHFVVGGVGQTISAWLAGDVRLEPDELVDHLAALLDELAEPNLYRLTETRAEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23422; Mature: 23290

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTSSARPYRGVEAAERLATRRNRLLAAGLDLLGDQRPDISAVTVRGVCRRAGLAARYF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
YESFTDKDEFVSCVFDWVVAELAATTQAAVATVPADEQTRAGIANIVRTITDDARVGRLL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCHHHHHHHH
FSTQLADPVVVRKRAESSALFAMLSGQHVGNALQVPANDRIKAAAHFVVGGVGQTISAWL
HHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHCCCHHHHHHHH
AGDVRLEPDELVDHLAALLDELAEPNLYRLTETRAEA
HCCCEECHHHHHHHHHHHHHHHCCCCEEEHHHHHCCC
>Mature Secondary Structure 
SDTSSARPYRGVEAAERLATRRNRLLAAGLDLLGDQRPDISAVTVRGVCRRAGLAARYF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
YESFTDKDEFVSCVFDWVVAELAATTQAAVATVPADEQTRAGIANIVRTITDDARVGRLL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCHHHHHHHH
FSTQLADPVVVRKRAESSALFAMLSGQHVGNALQVPANDRIKAAAHFVVGGVGQTISAWL
HHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHCCCHHHHHHHH
AGDVRLEPDELVDHLAALLDELAEPNLYRLTETRAEA
HCCCEECHHHHHHHHHHHHHHHCCCCEEEHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA