| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is ppe32 [H]
Identifier: 41408699
GI number: 41408699
Start: 2927700
End: 2928773
Strand: Direct
Name: ppe32 [H]
Synonym: MAP2601
Alternate gene names: 41408699
Gene position: 2927700-2928773 (Clockwise)
Preceding gene: 41408698
Following gene: 41408700
Centisome position: 60.62
GC content: 74.77
Gene sequence:
>1074_bases ATGGCTGAGAAAGGATCGCCGATGCTTGATTTCGGGGCGCTGCCGCCCGAGATCAACTCGGCCAGAATGTATTCCGGCCC GGGGTCGGGTCCCTTGACGGCCGCCGCGGCGGCCTGGGAGGAGCTGGCCGCCCAGCTGGAGAGCTACGCCGCCGGTTACT CGGCCACGCTGGCCGAACTGCGCGGCCCCGCGTGGTCCGGTGACGCGGCCGCCGCGATGGCCGCCGCGGTCGAACCGTAC GTGGCGTGGGCAACCGGCACGGCCGCGCGGGCCGGGCAGGCCGCCGCGCAGGCCCGGGCCGCGGCGGCCGCCCACGAGGC CGCGTTCGCCGCCACTGTGCCACCACATGTGGTGGCCGCCAACCGAATTCAGCTCGCCACCCTGATCGCGACCAACTTCT TCGGGCAGAACGCACCGGCGATCGCGGCCACCGAGAGCTGCTACGCCGAGATGTGGGCCCAGGACGCCACCGCCATGTAC GGCTATGCCGCGGCGTCGTCGGCCGCGACCACGCTCACCCCGTTCACCCACCCGCCCCGCACCACCACCGCGCACGGGCA GGCGGCCCAGGCGGCCGCGGTGAGCCACGCCGCCGATTCGCAACCACCGGGCTGGTCGTCGTTGGTCGACTCGGTCAGCG GCTTCAACACCGTGGTCACCACGCCGGGGCAGTCGTTCTTCGCCGCGGCCCGCACCCTGTTGGGCTGGGGACAATTCGGC ACCGGGCTCAACCTGGCCAACATCCAGGCGGCCAAGGCCGCAGCGGGAGCGGTCCGCCTGCCCGCCGCGGTCGCCGGCCC GTCGGTGTCGGGCGGGCTGGGGCGGGCGGCAACGGTGGGCAGGCTGTCCGTTCCGCCGGCGTGGCCGGCGGCGAATCCCG TTGCGCCCCTGGGCGAGACGGTGATGCGGCAGCCGGGCGGCATGGTTCGGCTGGTGTCGGGGTCCGCGCCGGATTCGCCC GCCGGCCCCGGAATTCCGCCGGCGCTGCGCACCGCCGATCGCTCGGCCGGTGTCCCGGTGCTGCGCAACGGGCGTCGCGC TTTCCGGATGCCCCGGCCGGCCTACGGCGGTTAG
Upstream 100 bases:
>100_bases TCGCGCCGCGCCAGTTCAAGATGCCGCGGCCGTCCGCCGGCGGGTAGCCGGTCGCCGAACCGCTGGGCAGTTCACCCCCA CAGTGCGGGTGGTGTCACCG
Downstream 100 bases:
>100_bases CCGGTGTTGGTGGCGATGTCCTCGGGGCCGCGCCAGGGGCCGAGGTCGCCGAATTCGCCGTCGTGGTGGCCGGGGCCGGC GTCGTCGATGAGAGTGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MAEKGSPMLDFGALPPEINSARMYSGPGSGPLTAAAAAWEELAAQLESYAAGYSATLAELRGPAWSGDAAAAMAAAVEPY VAWATGTAARAGQAAAQARAAAAAHEAAFAATVPPHVVAANRIQLATLIATNFFGQNAPAIAATESCYAEMWAQDATAMY GYAAASSAATTLTPFTHPPRTTTAHGQAAQAAAVSHAADSQPPGWSSLVDSVSGFNTVVTTPGQSFFAAARTLLGWGQFG TGLNLANIQAAKAAAGAVRLPAAVAGPSVSGGLGRAATVGRLSVPPAWPAANPVAPLGETVMRQPGGMVRLVSGSAPDSP AGPGIPPALRTADRSAGVPVLRNGRRAFRMPRPAYGG
Sequences:
>Translated_357_residues MAEKGSPMLDFGALPPEINSARMYSGPGSGPLTAAAAAWEELAAQLESYAAGYSATLAELRGPAWSGDAAAAMAAAVEPY VAWATGTAARAGQAAAQARAAAAAHEAAFAATVPPHVVAANRIQLATLIATNFFGQNAPAIAATESCYAEMWAQDATAMY GYAAASSAATTLTPFTHPPRTTTAHGQAAQAAAVSHAADSQPPGWSSLVDSVSGFNTVVTTPGQSFFAAARTLLGWGQFG TGLNLANIQAAKAAAGAVRLPAAVAGPSVSGGLGRAATVGRLSVPPAWPAANPVAPLGETVMRQPGGMVRLVSGSAPDSP AGPGIPPALRTADRSAGVPVLRNGRRAFRMPRPAYGG >Mature_356_residues AEKGSPMLDFGALPPEINSARMYSGPGSGPLTAAAAAWEELAAQLESYAAGYSATLAELRGPAWSGDAAAAMAAAVEPYV AWATGTAARAGQAAAQARAAAAAHEAAFAATVPPHVVAANRIQLATLIATNFFGQNAPAIAATESCYAEMWAQDATAMYG YAAASSAATTLTPFTHPPRTTTAHGQAAQAAAVSHAADSQPPGWSSLVDSVSGFNTVVTTPGQSFFAAARTLLGWGQFGT GLNLANIQAAKAAAGAVRLPAAVAGPSVSGGLGRAATVGRLSVPPAWPAANPVAPLGETVMRQPGGMVRLVSGSAPDSPA GPGIPPALRTADRSAGVPVLRNGRRAFRMPRPAYGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mycobacterial PPE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022171 - InterPro: IPR000030 [H]
Pfam domain/function: PF12484 PE_PPE_C; PF00823 PPE [H]
EC number: NA
Molecular weight: Translated: 35607; Mature: 35476
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEKGSPMLDFGALPPEINSARMYSGPGSGPLTAAAAAWEELAAQLESYAAGYSATLAEL CCCCCCCCEECCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH RGPAWSGDAAAAMAAAVEPYVAWATGTAARAGQAAAQARAAAAAHEAAFAATVPPHVVAA CCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHC NRIQLATLIATNFFGQNAPAIAATESCYAEMWAQDATAMYGYAAASSAATTLTPFTHPPR CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC TTTAHGQAAQAAAVSHAADSQPPGWSSLVDSVSGFNTVVTTPGQSFFAAARTLLGWGQFG CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCC TGLNLANIQAAKAAAGAVRLPAAVAGPSVSGGLGRAATVGRLSVPPAWPAANPVAPLGET CCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH VMRQPGGMVRLVSGSAPDSPAGPGIPPALRTADRSAGVPVLRNGRRAFRMPRPAYGG HHHCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCHHHCCCHHHCCCCCCCCC >Mature Secondary Structure AEKGSPMLDFGALPPEINSARMYSGPGSGPLTAAAAAWEELAAQLESYAAGYSATLAEL CCCCCCCEECCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH RGPAWSGDAAAAMAAAVEPYVAWATGTAARAGQAAAQARAAAAAHEAAFAATVPPHVVAA CCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHC NRIQLATLIATNFFGQNAPAIAATESCYAEMWAQDATAMYGYAAASSAATTLTPFTHPPR CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC TTTAHGQAAQAAAVSHAADSQPPGWSSLVDSVSGFNTVVTTPGQSFFAAARTLLGWGQFG CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCC TGLNLANIQAAKAAAGAVRLPAAVAGPSVSGGLGRAATVGRLSVPPAWPAANPVAPLGET CCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH VMRQPGGMVRLVSGSAPDSPAGPGIPPALRTADRSAGVPVLRNGRRAFRMPRPAYGG HHHCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCHHHCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]