| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is ppe2 [H]
Identifier: 41408693
GI number: 41408693
Start: 2919853
End: 2921610
Strand: Direct
Name: ppe2 [H]
Synonym: MAP2595
Alternate gene names: 41408693
Gene position: 2919853-2921610 (Clockwise)
Preceding gene: 41408692
Following gene: 41408694
Centisome position: 60.46
GC content: 72.7
Gene sequence:
>1758_bases ATGACCGCCCCCATCTGGATGGCCTCACCCCCGGAGGTGCATTCGTCGCTGCTGAGCGCGGGGCCGGGGCCCGGGCCGTT GCTCGCCGCCGCGGCGGCGTGGAGCTCGCTGAGCGTGCAGTACGCCGAGTCGGCCGACGAGCTGGTCACGCTGCTGGGCG CCGTGCGGGCCGGCGACTGGGACGGCCCGACGGCCGGCGCCTACCTGGCCGCGCACGCCCCCTATCTGGCCTGGCTGGCG CGGGCGAGCACCGACAGCGCGGCCGTGGCCGCCCAGCAGGAAGTCGCCGCCGCCGCCTACACCGCGGCGCTGGCGGCGAT GCCGACGCTGCCCGAGCTGGCCGCCAACCACGCCGCACACGCCGTGTTGACCGCGACGAATTTCTTTGGCATCAACACCA TTCCGATCGCGGTGAACGAGGCCGACTATGCCCGGATGTGGGTCCAGGCGGCCACGGTGATGGGCACCTACCAGGACGTG GCGGCCGCCGCGCTGGCGGCCACGCCGCACACCGAACCGGCGCCGCGGGTGATGGCGGCCGCCGCGCCGGCGGCCAGGGC CGCGCAGTCGTCGTCGTATCCGCCCGACACGCAGGACCAGTGGCTGGACTGGCTGGAGAAGACCGGGTTCGTCGACTTCT ACAACCGCTACATCCAGCCGTTGATCGACCAGTTGATGAACAACCCGTTCTTCCGGTCGCTGTTCTCCGGCTTCGACCCG TGGCTGCCGTCGCTGGGCAATCCGCTGAGCTTCCTCAACCCGTTCAACATCGCGTTCGCCCTCGGCTACCCGATGGATTT CGGTTCGTACTTCGGCTATTTGGCGCAGATGTTCAGCTTCGTCGCGGCGGATCTGGCCGCGGCGTTCGCGTCGGGCAATC CCGCGACCATCGCGTGGACCCTGCTGTTCACCACCATCGAGGTGATCGGCACCGTCATCACCGACACCATCGCGTTGATC AAGACGTTGCTCGAGCAGATGATCGTGCTGATCCCGGCGATTCTGCCGCTGCTGACCGTCTCGGTGGTCCCGTTGGTCGT GCCCACCCTGGTCGGTGGTTTGGCGGGCTTGACGGGTTTGGCTGGGCTGCATGCCATTCCGGTGCCCCCGTTCGTCCCGG CGCCGAACGCTCGTCCCGGTGGCGCTGGCACCGAGTCCGCCGCCCGCGCCGGCACCGGCCCCGTCCCCCGCGCCGGCGCC GGCCCCGACGTCCGCGGCGGCGCCCGCCGCGGCCGCACCCGGCGCGCCGCCGCCCACCCCGTCGGGGCCGCCGGTGGCCA CCCTGCACAGCCTCGCCTACCTGGTCGGCGGCCTGACCGCGGACGCGCGGCGGGCCGCGAGCGCCGGCGCCCGCAGACGC GAGGCGGCCGCGCCCGAAAACGTCGAGGCCCCCGCGGTGGCGCAGCCGGAGGAAGAGTCGACGCAGCGGCGCCGCCACCG GGCCGCGGCCAAACAGCTCGGCCGCGGCTACGAGTATCTGGATCCCGAGCCGTCGACGACCGCCTCGCAGCTGGGTGCGC CGACGCTGGGGTTCGCCGGAACCGCGGCCAAACGCGCGGCCGCCGCACCGGCGGGACTAAGCGCGCCGGTGCTCGACGAG TTCGCCGACGCCCCGCGCGCGCCGATGATGCCGGCCACCTGGGATGGATCGAAACAGTAACGTGCACAACGCTATTGGCG TGCACCAGTCTAAGGTGTCCCGGTCCGCACGCCCGCCCCGCACGGCGGCGGGCCGGCGCGAAAACCCCGGAGCGGTAA
Upstream 100 bases:
>100_bases GGGTGGCCGTCGTCGACGCTGCCACCGTTTCGGCGCCCCAACGGCGCGCCCGTTTCGTCCATACCCCCGCTGCGGCAAGG GTTTTGCGGGGGTGCGGTCG
Downstream 100 bases:
>100_bases CCTAACCCGCATGCACGGTTCGTCGGTGGTGTCCCTGATGCGGGAACGTGCCGGCCTGCAACCCGACGATGTGGCGTTCC GCTACACCGATTACGAGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 585; Mature: 584
Protein sequence:
>585_residues MTAPIWMASPPEVHSSLLSAGPGPGPLLAAAAAWSSLSVQYAESADELVTLLGAVRAGDWDGPTAGAYLAAHAPYLAWLA RASTDSAAVAAQQEVAAAAYTAALAAMPTLPELAANHAAHAVLTATNFFGINTIPIAVNEADYARMWVQAATVMGTYQDV AAAALAATPHTEPAPRVMAAAAPAARAAQSSSYPPDTQDQWLDWLEKTGFVDFYNRYIQPLIDQLMNNPFFRSLFSGFDP WLPSLGNPLSFLNPFNIAFALGYPMDFGSYFGYLAQMFSFVAADLAAAFASGNPATIAWTLLFTTIEVIGTVITDTIALI KTLLEQMIVLIPAILPLLTVSVVPLVVPTLVGGLAGLTGLAGLHAIPVPPFVPAPNARPGGAGTESAARAGTGPVPRAGA GPDVRGGARRGRTRRAAAHPVGAAGGHPAQPRLPGRRPDRGRAAGRERRRPQTRGGRARKRRGPRGGAAGGRVDAAAPPP GRGQTARPRLRVSGSRAVDDRLAAGCADAGVRRNRGQTRGRRTGGTKRAGARRVRRRPARADDAGHLGWIETVTCTTLLA CTSLRCPGPHARPARRRAGAKTPER
Sequences:
>Translated_585_residues MTAPIWMASPPEVHSSLLSAGPGPGPLLAAAAAWSSLSVQYAESADELVTLLGAVRAGDWDGPTAGAYLAAHAPYLAWLA RASTDSAAVAAQQEVAAAAYTAALAAMPTLPELAANHAAHAVLTATNFFGINTIPIAVNEADYARMWVQAATVMGTYQDV AAAALAATPHTEPAPRVMAAAAPAARAAQSSSYPPDTQDQWLDWLEKTGFVDFYNRYIQPLIDQLMNNPFFRSLFSGFDP WLPSLGNPLSFLNPFNIAFALGYPMDFGSYFGYLAQMFSFVAADLAAAFASGNPATIAWTLLFTTIEVIGTVITDTIALI KTLLEQMIVLIPAILPLLTVSVVPLVVPTLVGGLAGLTGLAGLHAIPVPPFVPAPNARPGGAGTESAARAGTGPVPRAGA GPDVRGGARRGRTRRAAAHPVGAAGGHPAQPRLPGRRPDRGRAAGRERRRPQTRGGRARKRRGPRGGAAGGRVDAAAPPP GRGQTARPRLRVSGSRAVDDRLAAGCADAGVRRNRGQTRGRRTGGTKRAGARRVRRRPARADDAGHLGWIETVTCTTLLA CTSLRCPGPHARPARRRAGAKTPER >Mature_584_residues TAPIWMASPPEVHSSLLSAGPGPGPLLAAAAAWSSLSVQYAESADELVTLLGAVRAGDWDGPTAGAYLAAHAPYLAWLAR ASTDSAAVAAQQEVAAAAYTAALAAMPTLPELAANHAAHAVLTATNFFGINTIPIAVNEADYARMWVQAATVMGTYQDVA AAALAATPHTEPAPRVMAAAAPAARAAQSSSYPPDTQDQWLDWLEKTGFVDFYNRYIQPLIDQLMNNPFFRSLFSGFDPW LPSLGNPLSFLNPFNIAFALGYPMDFGSYFGYLAQMFSFVAADLAAAFASGNPATIAWTLLFTTIEVIGTVITDTIALIK TLLEQMIVLIPAILPLLTVSVVPLVVPTLVGGLAGLTGLAGLHAIPVPPFVPAPNARPGGAGTESAARAGTGPVPRAGAG PDVRGGARRGRTRRAAAHPVGAAGGHPAQPRLPGRRPDRGRAAGRERRRPQTRGGRARKRRGPRGGAAGGRVDAAAPPPG RGQTARPRLRVSGSRAVDDRLAAGCADAGVRRNRGQTRGRRTGGTKRAGARRVRRRPARADDAGHLGWIETVTCTTLLAC TSLRCPGPHARPARRRAGAKTPER
Specific function: Unknown
COG id: COG5651
COG function: function code N; PPE-repeat proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mycobacterial PPE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000030 [H]
Pfam domain/function: PF00823 PPE [H]
EC number: NA
Molecular weight: Translated: 61044; Mature: 60913
Theoretical pI: Translated: 11.43; Mature: 11.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPIWMASPPEVHSSLLSAGPGPGPLLAAAAAWSSLSVQYAESADELVTLLGAVRAGDW CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DGPTAGAYLAAHAPYLAWLARASTDSAAVAAQQEVAAAAYTAALAAMPTLPELAANHAAH CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AVLTATNFFGINTIPIAVNEADYARMWVQAATVMGTYQDVAAAALAATPHTEPAPRVMAA HHEEHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH AAPAARAAQSSSYPPDTQDQWLDWLEKTGFVDFYNRYIQPLIDQLMNNPFFRSLFSGFDP HCHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC WLPSLGNPLSFLNPFNIAFALGYPMDFGSYFGYLAQMFSFVAADLAAAFASGNPATIAWT HHHHCCCCHHHCCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LLFTTIEVIGTVITDTIALIKTLLEQMIVLIPAILPLLTVSVVPLVVPTLVGGLAGLTGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLHAIPVPPFVPAPNARPGGAGTESAARAGTGPVPRAGAGPDVRGGARRGRTRRAAAHP HCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHCCCCHHHHCCC VGAAGGHPAQPRLPGRRPDRGRAAGRERRRPQTRGGRARKRRGPRGGAAGGRVDAAAPPP CCCCCCCCCCCCCCCCCCCCCHHCCHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC GRGQTARPRLRVSGSRAVDDRLAAGCADAGVRRNRGQTRGRRTGGTKRAGARRVRRRPAR CCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCC ADDAGHLGWIETVTCTTLLACTSLRCPGPHARPARRRAGAKTPER CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCC >Mature Secondary Structure TAPIWMASPPEVHSSLLSAGPGPGPLLAAAAAWSSLSVQYAESADELVTLLGAVRAGDW CCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DGPTAGAYLAAHAPYLAWLARASTDSAAVAAQQEVAAAAYTAALAAMPTLPELAANHAAH CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AVLTATNFFGINTIPIAVNEADYARMWVQAATVMGTYQDVAAAALAATPHTEPAPRVMAA HHEEHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH AAPAARAAQSSSYPPDTQDQWLDWLEKTGFVDFYNRYIQPLIDQLMNNPFFRSLFSGFDP HCHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC WLPSLGNPLSFLNPFNIAFALGYPMDFGSYFGYLAQMFSFVAADLAAAFASGNPATIAWT HHHHCCCCHHHCCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LLFTTIEVIGTVITDTIALIKTLLEQMIVLIPAILPLLTVSVVPLVVPTLVGGLAGLTGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLHAIPVPPFVPAPNARPGGAGTESAARAGTGPVPRAGAGPDVRGGARRGRTRRAAAHP HCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHCCCCHHHHCCC VGAAGGHPAQPRLPGRRPDRGRAAGRERRRPQTRGGRARKRRGPRGGAAGGRVDAAAPPP CCCCCCCCCCCCCCCCCCCCCHHCCHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC GRGQTARPRLRVSGSRAVDDRLAAGCADAGVRRNRGQTRGRRTGGTKRAGARRVRRRPAR CCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCC ADDAGHLGWIETVTCTTLLACTSLRCPGPHARPARRRAGAKTPER CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]