| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408671
Identifier: 41408671
GI number: 41408671
Start: 2892594
End: 2894411
Strand: Direct
Name: 41408671
Synonym: MAP2573
Alternate gene names: NA
Gene position: 2892594-2894411 (Clockwise)
Preceding gene: 41408664
Following gene: 41408675
Centisome position: 59.89
GC content: 76.24
Gene sequence:
>1818_bases GTGCCGATTCGATGGAACGTCCCCCGACAGGCGACGGCCGCCGAGCGGCTGGACGCGGCGTTGGCCGACACCGCCGCCGC GGCCGGGGCGGTGGTCCTGGGCCCCGACGGCATCGGCAAATCCACCTTGGCGCGGGTGGCCGCCGAGCGGTTCGCCGCCG CGCACCCCGGCACCCGGGTCCGCTGGGTGACCGGCACGCCGACCGAACGCGCGGTCCCGTTCGGGGCGTTCAGCCACCTG GTGCGGATCGCCGAGATCGGCAAGCCGGCCGCGCTGCTGCGGGCCGCCCGGGCCTCACTCGGCGACGCCGGCCTGCTGCT GGTCGTCGACGACGCCCACCAGCTGGACGTGCTGTCGGCGACCCTGGTGTACCAGCTGGCCCGCGCCGGCGCGGCGCGGC TGATCGTCACCGCCCGCGCCGACGGCGCCCCGGACGCCATCGCGGCGCTGTGGGACGACGGCCTGCTCACCCGAATCGAC GTCGAGGCGCCCGATGCCCCGACGTCGCCGGGCGAGATCGACGCCTTCCTCGCCGAGCTGACGCCGCCGGCCCACGCGGT GCTGGAATACCTGGCCGTCGCCGAGCCGCTGTCGGTCACCGACCTGAACGCGCTCGCCGGTGACGGCGCGGTGGCCGAGG CGCAACGGTGGGGCGCGGCGGAGACCCGGATGCGCGGCGGGACGTCCGACGACCCGGTGGTGTACACCGCGCACCCGCTG TTCGCCGAGCGGGTGCGGGCCGCGCTGGACCCCGACGATGCCCGGCAACGACGCACCGAGCTGGTCACCGTGCTGGAGCG GCATCCGTCCGACCGGCTCAGCGACCGGCTGCGGCTGGTGTCGCTGGCGCTGGACAGCGACGCGCCGCCGCGGGCCGCCG ACGTCGTCGACGCCGCGCGGCAGGCGCTGCGGCTGGGCGACCTGGCGCTGGGCGAACGGCTGGCCCGCGCCGCCCTGCGG CGCTCCGGCGGCCTGGCGGCGCGGCTGGCGCCTGGCGCATGCGCTGGGCTGGCAGGGCCGCGGCCGGGAGGCCGACGCGC TGCTGGCCGAGGTCGACTCCACCGGCTTGACCGAGGCCGCGCTGATGGACTGGGCCCTGCTGCGGGCGGCGAACCAGTTC TGGATGCTCAGCGAGCCGGAGCGGGCCACCGCCTTCCTGCGCACCGTCCGCAACCGCGTCGCGGACCCCGGCCCGCGCAC CACCCTGGACGCGCTCAGCGCCACCTTCGCGATGAACGCGGGCAACGTCGGGCACGCCGTCAAGGTCGCCGGCGAGGTGC TCGGCTCGCCCGCCGCCGACGACCAGGCGGTGGCCTGGTCGGGCAGCGCGGCCGCGTTGTGCGCGGCGCGGCAGGGGCGG TTCGACGACGTCGAGCCGTTGGCGCGGCGAGCGTTGGCCGCCGAACATCCCGGGCTGCTGCGCTTCACCATCGGGCTGGC GCAGACCACCACGCTGTTGCTGGCGGGCCGGCTCGAGCAGGCCCGCGAACTCGCGCAGCAGTTCACCGATTTCGCCGAGC TGCAGCAGCCGGGCCGCGCGATCGGCGAGGTGCTGCTGGCGCACGTGCTGCTCGCCGAGGGCGAATTCGCTTCTGCGGCA GGGTTATTGGGTCCGGCCGCGGCCACCTTGGAGCGCACCGGTTACTCGTGGGGGCCGTTGTCGCTGACCCTGCTGGCCAC CGCGCTGGCCCAGCTGGGCGACACCGCCGCCACGGCAAAGGCATTGAGCCGGGCCGAAACCCGGCATGGCACCAAGTCGG CGCTGTTCGCGCCCGAGCTCGGGGTGGCGCGGGCGCATCGGCTGGCCCTGATGCGTGA
Upstream 100 bases:
>100_bases TTCTGCGGGCATATCCGACAAACGTAGACCAACCCCGCGCGGCCCGTCATATCTGGGGCTTTCGCCGTGGCGGCGGGCCC GCGCGCCATAAAATCCGGCC
Downstream 100 bases:
>100_bases CGCCCACGGCGCGGTGGCCGCCGCGCGCGATGCCGCCCGGATGGCCGAGCGCGGCGGTCAGCGGGCGGTGGCGGTGCGCG TCTGGCATGAGGCGGTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 605; Mature: 604
Protein sequence:
>605_residues MPIRWNVPRQATAAERLDAALADTAAAAGAVVLGPDGIGKSTLARVAAERFAAAHPGTRVRWVTGTPTERAVPFGAFSHL VRIAEIGKPAALLRAARASLGDAGLLLVVDDAHQLDVLSATLVYQLARAGAARLIVTARADGAPDAIAALWDDGLLTRID VEAPDAPTSPGEIDAFLAELTPPAHAVLEYLAVAEPLSVTDLNALAGDGAVAEAQRWGAAETRMRGGTSDDPVVYTAHPL FAERVRAALDPDDARQRRTELVTVLERHPSDRLSDRLRLVSLALDSDAPPRAADVVDAARQALRLGDLALGERLARAALR RSGGLAARLAPGACAGLAGPRPGGRRAAGRGRLHRLDRGRADGLGPAAGGEPVLDAQRAGAGHRLPAHRPQPRRGPRPAH HPGRAQRHLRDERGQRRARRQGRRRGARLARRRRPGGGLVGQRGRVVRGAAGAVRRRRAVGAASVGRRTSRAAALHHRAG ADHHAVAGGPARAGPRTRAAVHRFRRAAAAGPRDRRGAAGARAARRGRIRFCGRVIGSGRGHLGAHRLLVGAVVADPAGH RAGPAGRHRRHGKGIEPGRNPAWHQVGAVRARARGGAGASAGPDA
Sequences:
>Translated_605_residues MPIRWNVPRQATAAERLDAALADTAAAAGAVVLGPDGIGKSTLARVAAERFAAAHPGTRVRWVTGTPTERAVPFGAFSHL VRIAEIGKPAALLRAARASLGDAGLLLVVDDAHQLDVLSATLVYQLARAGAARLIVTARADGAPDAIAALWDDGLLTRID VEAPDAPTSPGEIDAFLAELTPPAHAVLEYLAVAEPLSVTDLNALAGDGAVAEAQRWGAAETRMRGGTSDDPVVYTAHPL FAERVRAALDPDDARQRRTELVTVLERHPSDRLSDRLRLVSLALDSDAPPRAADVVDAARQALRLGDLALGERLARAALR RSGGLAARLAPGACAGLAGPRPGGRRAAGRGRLHRLDRGRADGLGPAAGGEPVLDAQRAGAGHRLPAHRPQPRRGPRPAH HPGRAQRHLRDERGQRRARRQGRRRGARLARRRRPGGGLVGQRGRVVRGAAGAVRRRRAVGAASVGRRTSRAAALHHRAG ADHHAVAGGPARAGPRTRAAVHRFRRAAAAGPRDRRGAAGARAARRGRIRFCGRVIGSGRGHLGAHRLLVGAVVADPAGH RAGPAGRHRRHGKGIEPGRNPAWHQVGAVRARARGGAGASAGPDA >Mature_604_residues PIRWNVPRQATAAERLDAALADTAAAAGAVVLGPDGIGKSTLARVAAERFAAAHPGTRVRWVTGTPTERAVPFGAFSHLV RIAEIGKPAALLRAARASLGDAGLLLVVDDAHQLDVLSATLVYQLARAGAARLIVTARADGAPDAIAALWDDGLLTRIDV EAPDAPTSPGEIDAFLAELTPPAHAVLEYLAVAEPLSVTDLNALAGDGAVAEAQRWGAAETRMRGGTSDDPVVYTAHPLF AERVRAALDPDDARQRRTELVTVLERHPSDRLSDRLRLVSLALDSDAPPRAADVVDAARQALRLGDLALGERLARAALRR SGGLAARLAPGACAGLAGPRPGGRRAAGRGRLHRLDRGRADGLGPAAGGEPVLDAQRAGAGHRLPAHRPQPRRGPRPAHH PGRAQRHLRDERGQRRARRQGRRRGARLARRRRPGGGLVGQRGRVVRGAAGAVRRRRAVGAASVGRRTSRAAALHHRAGA DHHAVAGGPARAGPRTRAAVHRFRRAAAAGPRDRRGAAGARAARRGRIRFCGRVIGSGRGHLGAHRLLVGAVVADPAGHR AGPAGRHRRHGKGIEPGRNPAWHQVGAVRARARGGAGASAGPDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63179; Mature: 63047
Theoretical pI: Translated: 12.34; Mature: 12.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIRWNVPRQATAAERLDAALADTAAAAGAVVLGPDGIGKSTLARVAAERFAAAHPGTRV CCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEE RWVTGTPTERAVPFGAFSHLVRIAEIGKPAALLRAARASLGDAGLLLVVDDAHQLDVLSA EEEECCCCHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHH TLVYQLARAGAARLIVTARADGAPDAIAALWDDGLLTRIDVEAPDAPTSPGEIDAFLAEL HHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHC TPPAHAVLEYLAVAEPLSVTDLNALAGDGAVAEAQRWGAAETRMRGGTSDDPVVYTAHPL CCHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHCCCHHHHHCCCCCCCCEEEECCHH FAERVRAALDPDDARQRRTELVTVLERHPSDRLSDRLRLVSLALDSDAPPRAADVVDAAR HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHH QALRLGDLALGERLARAALRRSGGLAARLAPGACAGLAGPRPGGRRAAGRGRLHRLDRGR HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHCCCCCCCCCCCCCCCCHHHHHCCCC ADGLGPAAGGEPVLDAQRAGAGHRLPAHRPQPRRGPRPAHHPGRAQRHLRDERGQRRARR CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH QGRRRGARLARRRRPGGGLVGQRGRVVRGAAGAVRRRRAVGAASVGRRTSRAAALHHRAG HHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHCHHHHCCHHHHHHHHHHHCC ADHHAVAGGPARAGPRTRAAVHRFRRAAAAGPRDRRGAAGARAARRGRIRFCGRVIGSGR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCC GHLGAHRLLVGAVVADPAGHRAGPAGRHRRHGKGIEPGRNPAWHQVGAVRARARGGAGAS CCHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC AGPDA CCCCC >Mature Secondary Structure PIRWNVPRQATAAERLDAALADTAAAAGAVVLGPDGIGKSTLARVAAERFAAAHPGTRV CCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEE RWVTGTPTERAVPFGAFSHLVRIAEIGKPAALLRAARASLGDAGLLLVVDDAHQLDVLSA EEEECCCCHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHH TLVYQLARAGAARLIVTARADGAPDAIAALWDDGLLTRIDVEAPDAPTSPGEIDAFLAEL HHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHC TPPAHAVLEYLAVAEPLSVTDLNALAGDGAVAEAQRWGAAETRMRGGTSDDPVVYTAHPL CCHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHCCCHHHHHCCCCCCCCEEEECCHH FAERVRAALDPDDARQRRTELVTVLERHPSDRLSDRLRLVSLALDSDAPPRAADVVDAAR HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHH QALRLGDLALGERLARAALRRSGGLAARLAPGACAGLAGPRPGGRRAAGRGRLHRLDRGR HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHCCCCCCCCCCCCCCCCHHHHHCCCC ADGLGPAAGGEPVLDAQRAGAGHRLPAHRPQPRRGPRPAHHPGRAQRHLRDERGQRRARR CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH QGRRRGARLARRRRPGGGLVGQRGRVVRGAAGAVRRRRAVGAASVGRRTSRAAALHHRAG HHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHCHHHHCCHHHHHHHHHHHCC ADHHAVAGGPARAGPRTRAAVHRFRRAAAAGPRDRRGAAGARAARRGRIRFCGRVIGSGR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCC GHLGAHRLLVGAVVADPAGHRAGPAGRHRRHGKGIEPGRNPAWHQVGAVRARARGGAGAS CCHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC AGPDA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA