| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is cocE [H]
Identifier: 41408661
GI number: 41408661
Start: 2880669
End: 2882363
Strand: Direct
Name: cocE [H]
Synonym: MAP2563
Alternate gene names: 41408661
Gene position: 2880669-2882363 (Clockwise)
Preceding gene: 41408660
Following gene: 41408663
Centisome position: 59.64
GC content: 70.38
Gene sequence:
>1695_bases GTGCCGCCCACTCGGATGACCGCGCTGGACCGTCCCTGGCGGCGCCCCGGCGCATTGCGCTACGCGCTGAACAGGATTCG CGGCGTCGCCAAACCGCCCGTCACCGTCACCGACCCACCCGCGGACCTGCACGTCGAACGGGATGTCGCCGTCCCCACCC GCGACGCAACGGTGTTGCGAATCAACGTCTTTCGCAAGCCGGACGCGGGGCCGCGACCGGTCATCCTGAGCATCCACCCG TACGGCAAGGACAACCTGCCCAAGCGGCGGGGCAACCGGTGGACCTTTTCGGCGCAGTACCGGATACTGCGCCAGCCGCG ACCGGTGACCTTCTCGGCGCTGACCGGTTGGGAAGCGCCCGATCCCGCCTGGTGGACGGCGCAGGGCTTCGTCGTGGTGA ACGCCGACTCGCGCGGCTGCGGCCGTTCGGAGGGCACCGGAAACCTGTTGTCGCACCGCGAGGCCGAGGACACCTACGAC CTGGTGCAGTGGATCGCCGGGCAGCCGTGGAGCGACGGCAACGTCGTCATGCTGGGGGTGTCCTACCTGGCCATCAGCCA ATACGCGGTCGCCGCCCTGCAGCCGCCGGCGCTGCGGGCGATCTGCCCGTGGGAGGGCTTCACCGACGCCTACCGGGACC TGATGTTTCCCGGCGGCGTGCGCGAGTTGGGCTTCATCCGAATGTGGTCACGCAATGTGCGACGCGATACCCGCCAGGCC TACGACTTGCAGGACATGCAGGACCGCCACCCGCTGCGCGACGAGTTCTGGCGCTCGCTGGTGCCCGACCTGTCGGCGAT CACCGTGCCCATGCTGGTCTGTGGCAGCTTCTCCGACAACAACTTACACAGCCGCGGCTCGCTGCGCGCCTTCACGCACA GCAGCTCGACGCATGCCCGGCTCTACACCCATCGCGGCGGCAAGTGGGCGACCTTTTACGCCGAGGAGGCGCTGGCCGAA CAGCTGAGCTTCTTTCGCGGTGTACTGGACGGGGCCCCGGCCGCTCGCAGCGTGCGCCTCGAGGTACGCGAGGACCGCGA CACCGTCACGGCGGTGCGCGAAGAATCCGAATGGCCGCTGGCCCGAACCCGCTGGCGCGCACTGCATCTGGGTGACGCCG GGGTGCTGAGAACCGACCCGGCCGCACAGCCGGGCAGGGTGACATTCGGAACACGTTCCCGCGCAGCATGTTTCACCTGG AATGTGCCCGACGACGTGGAACTGACCGGGCCGATGGCCGCCCGGCTGTGGGTGGAACTGCACGGCTGCGACGACGCGAA CCTGTTCGTCGGCGTGGAGAAGTGGCGCCCCGGCCGGTTCCGCGACCGCTTCGTCGCGTTCGAAGGGTCCTACGGCTACG GCCGCGACCGGGTCAGCACCGGCTGGCAACGAGTTTCGCTGCGCGCCCTCGATTCCCGGCTGTCGCGGCCGGGACAGCCC GTCGCGGCCTGCACCGATCCGCAACCCGTCGCGGCGGGCGAGGTCGTCGCGGTCGACGTCGCGCTGGGCCCGTCGGCGAC GCTGTTCCGCGCCGGCGAGCACCTGCGGCTGGTGGTCGCCGGGCGCTGGCTGTGCCCGACCAATCCGCTCACCGGCCAGA TCCCGGCCGCCTACCAGAACTCGCCGCGCGGTCGCGTCAGCCTGCACTGGGGTCCGCGCCGCGACGCGCATCTGCTGATC CCCGAGATCCCCTGA
Upstream 100 bases:
>100_bases TGCAGGAACTACCCGGATACCCCGACTACACCCAGAAGGTGCGCTACCGGCTGGCCCCCTACCTGTGGTAGGCGCGCCGC CGAGCGCCTAGGGTATTGGC
Downstream 100 bases:
>100_bases GCCGCCGAGCAGACGCAAAACCACCCGACACGCCGAAGAATTGGGGGTTTTTGCGTCTGCTCGCGGTGCGATGGCGACCT TAGATCCAGACGCCCTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 564; Mature: 563
Protein sequence:
>564_residues MPPTRMTALDRPWRRPGALRYALNRIRGVAKPPVTVTDPPADLHVERDVAVPTRDATVLRINVFRKPDAGPRPVILSIHP YGKDNLPKRRGNRWTFSAQYRILRQPRPVTFSALTGWEAPDPAWWTAQGFVVVNADSRGCGRSEGTGNLLSHREAEDTYD LVQWIAGQPWSDGNVVMLGVSYLAISQYAVAALQPPALRAICPWEGFTDAYRDLMFPGGVRELGFIRMWSRNVRRDTRQA YDLQDMQDRHPLRDEFWRSLVPDLSAITVPMLVCGSFSDNNLHSRGSLRAFTHSSSTHARLYTHRGGKWATFYAEEALAE QLSFFRGVLDGAPAARSVRLEVREDRDTVTAVREESEWPLARTRWRALHLGDAGVLRTDPAAQPGRVTFGTRSRAACFTW NVPDDVELTGPMAARLWVELHGCDDANLFVGVEKWRPGRFRDRFVAFEGSYGYGRDRVSTGWQRVSLRALDSRLSRPGQP VAACTDPQPVAAGEVVAVDVALGPSATLFRAGEHLRLVVAGRWLCPTNPLTGQIPAAYQNSPRGRVSLHWGPRRDAHLLI PEIP
Sequences:
>Translated_564_residues MPPTRMTALDRPWRRPGALRYALNRIRGVAKPPVTVTDPPADLHVERDVAVPTRDATVLRINVFRKPDAGPRPVILSIHP YGKDNLPKRRGNRWTFSAQYRILRQPRPVTFSALTGWEAPDPAWWTAQGFVVVNADSRGCGRSEGTGNLLSHREAEDTYD LVQWIAGQPWSDGNVVMLGVSYLAISQYAVAALQPPALRAICPWEGFTDAYRDLMFPGGVRELGFIRMWSRNVRRDTRQA YDLQDMQDRHPLRDEFWRSLVPDLSAITVPMLVCGSFSDNNLHSRGSLRAFTHSSSTHARLYTHRGGKWATFYAEEALAE QLSFFRGVLDGAPAARSVRLEVREDRDTVTAVREESEWPLARTRWRALHLGDAGVLRTDPAAQPGRVTFGTRSRAACFTW NVPDDVELTGPMAARLWVELHGCDDANLFVGVEKWRPGRFRDRFVAFEGSYGYGRDRVSTGWQRVSLRALDSRLSRPGQP VAACTDPQPVAAGEVVAVDVALGPSATLFRAGEHLRLVVAGRWLCPTNPLTGQIPAAYQNSPRGRVSLHWGPRRDAHLLI PEIP >Mature_563_residues PPTRMTALDRPWRRPGALRYALNRIRGVAKPPVTVTDPPADLHVERDVAVPTRDATVLRINVFRKPDAGPRPVILSIHPY GKDNLPKRRGNRWTFSAQYRILRQPRPVTFSALTGWEAPDPAWWTAQGFVVVNADSRGCGRSEGTGNLLSHREAEDTYDL VQWIAGQPWSDGNVVMLGVSYLAISQYAVAALQPPALRAICPWEGFTDAYRDLMFPGGVRELGFIRMWSRNVRRDTRQAY DLQDMQDRHPLRDEFWRSLVPDLSAITVPMLVCGSFSDNNLHSRGSLRAFTHSSSTHARLYTHRGGKWATFYAEEALAEQ LSFFRGVLDGAPAARSVRLEVREDRDTVTAVREESEWPLARTRWRALHLGDAGVLRTDPAAQPGRVTFGTRSRAACFTWN VPDDVELTGPMAARLWVELHGCDDANLFVGVEKWRPGRFRDRFVAFEGSYGYGRDRVSTGWQRVSLRALDSRLSRPGQPV AACTDPQPVAAGEVVAVDVALGPSATLFRAGEHLRLVVAGRWLCPTNPLTGQIPAAYQNSPRGRVSLHWGPRRDAHLLIP EIP
Specific function: Hydrolyzes cocaine to benzoate and ecgonine methyl ester, endowing the bacteria with the ability to utilize cocaine as a sole source of carbon and energy for growth, as this bacterium lives in the rhizosphere of coca plants [H]
COG id: COG2936
COG function: function code R; Predicted acyl esterases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alpha/beta hydrolase family. Carboxylesterase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005674 - InterPro: IPR008979 - InterPro: IPR013736 - InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15; PF08530 PepX_C [H]
EC number: NA
Molecular weight: Translated: 63095; Mature: 62964
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPTRMTALDRPWRRPGALRYALNRIRGVAKPPVTVTDPPADLHVERDVAVPTRDATVLR CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCEEEECCCCCCCCCCEEEE INVFRKPDAGPRPVILSIHPYGKDNLPKRRGNRWTFSAQYRILRQPRPVTFSALTGWEAP EEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEHEECCCCCEEEEEECCCCCC DPAWWTAQGFVVVNADSRGCGRSEGTGNLLSHREAEDTYDLVQWIAGQPWSDGNVVMLGV CCCEEEECCEEEEECCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEH SYLAISQYAVAALQPPALRAICPWEGFTDAYRDLMFPGGVRELGFIRMWSRNVRRDTRQA HHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH YDLQDMQDRHPLRDEFWRSLVPDLSAITVPMLVCGSFSDNNLHSRGSLRAFTHSSSTHAR CCCHHHHHCCCHHHHHHHHHCCCHHHHHHHHHEECCCCCCCCCCCCCEEEEECCCCCCEE LYTHRGGKWATFYAEEALAEQLSFFRGVLDGAPAARSVRLEVREDRDTVTAVREESEWPL EEEECCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHCCCCCCH ARTRWRALHLGDAGVLRTDPAAQPGRVTFGTRSRAACFTWNVPDDVELTGPMAARLWVEL HHHEEEEEEECCCCCEECCCCCCCCEEEECCCCCCEEEECCCCCCCEECCCEEEEEEEEE HGCDDANLFVGVEKWRPGRFRDRFVAFEGSYGYGRDRVSTGWQRVSLRALDSRLSRPGQP ECCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCC VAACTDPQPVAAGEVVAVDVALGPSATLFRAGEHLRLVVAGRWLCPTNPLTGQIPAAYQN EEECCCCCCCCCCCEEEEEEECCCCCCEEECCCEEEEEEECCEECCCCCCCCCCCHHHCC SPRGRVSLHWGPRRDAHLLIPEIP CCCCEEEEEECCCCCCEEECCCCC >Mature Secondary Structure PPTRMTALDRPWRRPGALRYALNRIRGVAKPPVTVTDPPADLHVERDVAVPTRDATVLR CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCEEEECCCCCCCCCCEEEE INVFRKPDAGPRPVILSIHPYGKDNLPKRRGNRWTFSAQYRILRQPRPVTFSALTGWEAP EEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEHEECCCCCEEEEEECCCCCC DPAWWTAQGFVVVNADSRGCGRSEGTGNLLSHREAEDTYDLVQWIAGQPWSDGNVVMLGV CCCEEEECCEEEEECCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEH SYLAISQYAVAALQPPALRAICPWEGFTDAYRDLMFPGGVRELGFIRMWSRNVRRDTRQA HHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH YDLQDMQDRHPLRDEFWRSLVPDLSAITVPMLVCGSFSDNNLHSRGSLRAFTHSSSTHAR CCCHHHHHCCCHHHHHHHHHCCCHHHHHHHHHEECCCCCCCCCCCCCEEEEECCCCCCEE LYTHRGGKWATFYAEEALAEQLSFFRGVLDGAPAARSVRLEVREDRDTVTAVREESEWPL EEEECCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHCCCCCCH ARTRWRALHLGDAGVLRTDPAAQPGRVTFGTRSRAACFTWNVPDDVELTGPMAARLWVEL HHHEEEEEEECCCCCEECCCCCCCCEEEECCCCCCEEEECCCCCCCEECCCEEEEEEEEE HGCDDANLFVGVEKWRPGRFRDRFVAFEGSYGYGRDRVSTGWQRVSLRALDSRLSRPGQP ECCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCC VAACTDPQPVAAGEVVAVDVALGPSATLFRAGEHLRLVVAGRWLCPTNPLTGQIPAAYQN EEECCCCCCCCCCCEEEEEEECCCCCCEEECCCEEEEEEECCEECCCCCCCCCCCHHHCC SPRGRVSLHWGPRRDAHLLIPEIP CCCCEEEEEECCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10698749; 11742345; 12369817 [H]