| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41408648
Identifier: 41408648
GI number: 41408648
Start: 2867838
End: 2869145
Strand: Direct
Name: 41408648
Synonym: MAP2550
Alternate gene names: NA
Gene position: 2867838-2869145 (Clockwise)
Preceding gene: 41408641
Following gene: 41408649
Centisome position: 59.38
GC content: 71.79
Gene sequence:
>1308_bases ATGGGATCGGTCAACAGGGTGTACATCGCGCGGCTGGCGCGGATACTGGTGCTGGGCCCGCTCGGCGAATCCGTCGGCCG GGTCCGCGACGTGGTGATCAGCATCAGCATCGTCCGCCAGCAACCGCGGGTGCTGGGGCTGGTCGTCGACCTGGCGACGC GGCGCAGCATCTTCATCCCGATCCTGCGGGTGGCCGCCATCGACCCCAACGCCGTGACGCTGAGCACCGGCAGCGTGTCG CTGCGCCATTTCGAGCAGCGGCCCGGCGAGGTGCTGGCCATAGGTCAGGTGCTCGACACCGTGGTCAAGGTCAACGACCC CGAACTGCCGGAGCTGGCCGGTGTCGACGTGGTGGTGACCGACCTGGGCATCGAGCAGACCCGGACGCGGGACTGGATGG TCACCCGGGTCGCGGTGCGCCCGCAGCGACGGCTGCGCCGGCGCGGCCCGGTGCACGTGGTGGACTGGCGCAACGTGCAG GGCCTGACCCCGTCGGCGCTGGCGCTGCCCGGCCAGGCCGTCGCGCAGCTGCTCGAACAGTTCGAGGGCCGCAAGCCGGT CGACGTCGCCGACGCCATCCGCGGACTCCCGCCCAAGCGCCGCTACGAGGTGCTCAAGGCGCTCAACGACGACCGGCTGG CCGACATCCTGCAGGAGCTGCCCGAACTCGACCAGGCCGAGGTGCTCTCGCAGCTGGGGACCGAACGGTCGGCCGACGTG CTCGAGGAGATGGATCCCGACGACGCCGCCGACCTGCTCGGGGTGCTCAATCCGACCGACGCCGAGATGCTGCTGAAACG GATGGACCCCGGCGATTCGGCCTCGGTGCGCCGCCTACTCACCCACTCCCCCGACACCGCGGGCGGCCTGATGACGTCCA ACCCGGTGGTGCTCACCCCGGACACCGCGGTCGCCGAGGCGCTGGCCCGGGCCCGCGATCCCGATCTGACCGCCGCGCTG TCGTCCATGGTGTTCGTGGTGCGCCCGCCCACGGCCACCCCCACCGGCCGCTACCTGGGCTGTGTGCCGTTGCAGCGGCT GCTGCGCGAGGCGCCGGCCGAGCTGGTCGGCGGGATCGTCGACAGCGACCTGCTGACGCTGCGGCCGGAGACGCCGCTGG TCGCGGTGACCCGCTACCTGGCCGCATACAACCTGGTGTGCGGCCCCGTGGTCGACGACGAGAACCACCTGCTGGGCGCG GTGACCGTGGACGACCTGCTCGATCACCTGCTGCCGCCGGACTGGCGGGTGGACATGCAGGAACTCGACACCGCCGGCCG GCTCGAGGGACTGGGAGGATCCGGGTGA
Upstream 100 bases:
>100_bases TCGCCACCCTGGTGGTGACTTTGGTGGTCGTGCTGTTCGCCTTGCACACCCACTAGGTGCGCTCGGCCATCGAACCGGCG GCTGCCTAGGCTCTACTGCC
Downstream 100 bases:
>100_bases GCAAATCCACGGCTGTGCGCCGGCTGTACACGCCGCGGACATCGCGCCGGTACTCGCCGCGGCTGGATCCCGAGACCGTC GGGCAGATCACCGAGTCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MGSVNRVYIARLARILVLGPLGESVGRVRDVVISISIVRQQPRVLGLVVDLATRRSIFIPILRVAAIDPNAVTLSTGSVS LRHFEQRPGEVLAIGQVLDTVVKVNDPELPELAGVDVVVTDLGIEQTRTRDWMVTRVAVRPQRRLRRRGPVHVVDWRNVQ GLTPSALALPGQAVAQLLEQFEGRKPVDVADAIRGLPPKRRYEVLKALNDDRLADILQELPELDQAEVLSQLGTERSADV LEEMDPDDAADLLGVLNPTDAEMLLKRMDPGDSASVRRLLTHSPDTAGGLMTSNPVVLTPDTAVAEALARARDPDLTAAL SSMVFVVRPPTATPTGRYLGCVPLQRLLREAPAELVGGIVDSDLLTLRPETPLVAVTRYLAAYNLVCGPVVDDENHLLGA VTVDDLLDHLLPPDWRVDMQELDTAGRLEGLGGSG
Sequences:
>Translated_435_residues MGSVNRVYIARLARILVLGPLGESVGRVRDVVISISIVRQQPRVLGLVVDLATRRSIFIPILRVAAIDPNAVTLSTGSVS LRHFEQRPGEVLAIGQVLDTVVKVNDPELPELAGVDVVVTDLGIEQTRTRDWMVTRVAVRPQRRLRRRGPVHVVDWRNVQ GLTPSALALPGQAVAQLLEQFEGRKPVDVADAIRGLPPKRRYEVLKALNDDRLADILQELPELDQAEVLSQLGTERSADV LEEMDPDDAADLLGVLNPTDAEMLLKRMDPGDSASVRRLLTHSPDTAGGLMTSNPVVLTPDTAVAEALARARDPDLTAAL SSMVFVVRPPTATPTGRYLGCVPLQRLLREAPAELVGGIVDSDLLTLRPETPLVAVTRYLAAYNLVCGPVVDDENHLLGA VTVDDLLDHLLPPDWRVDMQELDTAGRLEGLGGSG >Mature_434_residues GSVNRVYIARLARILVLGPLGESVGRVRDVVISISIVRQQPRVLGLVVDLATRRSIFIPILRVAAIDPNAVTLSTGSVSL RHFEQRPGEVLAIGQVLDTVVKVNDPELPELAGVDVVVTDLGIEQTRTRDWMVTRVAVRPQRRLRRRGPVHVVDWRNVQG LTPSALALPGQAVAQLLEQFEGRKPVDVADAIRGLPPKRRYEVLKALNDDRLADILQELPELDQAEVLSQLGTERSADVL EEMDPDDAADLLGVLNPTDAEMLLKRMDPGDSASVRRLLTHSPDTAGGLMTSNPVVLTPDTAVAEALARARDPDLTAALS SMVFVVRPPTATPTGRYLGCVPLQRLLREAPAELVGGIVDSDLLTLRPETPLVAVTRYLAAYNLVCGPVVDDENHLLGAV TVDDLLDHLLPPDWRVDMQELDTAGRLEGLGGSG
Specific function: Acts as a magnesium transporter [H]
COG id: COG2239
COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR006668 - InterPro: IPR006667 - InterPro: IPR006669 [H]
Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]
EC number: NA
Molecular weight: Translated: 47141; Mature: 47010
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSVNRVYIARLARILVLGPLGESVGRVRDVVISISIVRQQPRVLGLVVDLATRRSIFIP CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHH ILRVAAIDPNAVTLSTGSVSLRHFEQRPGEVLAIGQVLDTVVKVNDPELPELAGVDVVVT HHHHEECCCCEEEEECCCCHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCEEEE DLGIEQTRTRDWMVTRVAVRPQRRLRRRGPVHVVDWRNVQGLTPSALALPGQAVAQLLEQ ECCCCHHCCCHHHHHHHHHCHHHHHHHCCCEEEEECCCCCCCCCHHHCCCHHHHHHHHHH FEGRKPVDVADAIRGLPPKRRYEVLKALNDDRLADILQELPELDQAEVLSQLGTERSADV HCCCCCCCHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHCCCCHHHH LEEMDPDDAADLLGVLNPTDAEMLLKRMDPGDSASVRRLLTHSPDTAGGLMTSNPVVLTP HHHCCCCHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEECCCEEECC DTAVAEALARARDPDLTAALSSMVFVVRPPTATPTGRYLGCVPLQRLLREAPAELVGGIV CHHHHHHHHHCCCCCHHHHHHCCEEEEECCCCCCCCCEECCHHHHHHHHHCHHHHHHHHH DSDLLTLRPETPLVAVTRYLAAYNLVCGPVVDDENHLLGAVTVDDLLDHLLPPDWRVDMQ CCCCEEECCCCCHHHHHHHHHHHHHHCCCEECCCCCEEEEEEHHHHHHHHCCCCCCCCHH ELDTAGRLEGLGGSG HCCCHHCCCCCCCCC >Mature Secondary Structure GSVNRVYIARLARILVLGPLGESVGRVRDVVISISIVRQQPRVLGLVVDLATRRSIFIP CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHH ILRVAAIDPNAVTLSTGSVSLRHFEQRPGEVLAIGQVLDTVVKVNDPELPELAGVDVVVT HHHHEECCCCEEEEECCCCHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCEEEE DLGIEQTRTRDWMVTRVAVRPQRRLRRRGPVHVVDWRNVQGLTPSALALPGQAVAQLLEQ ECCCCHHCCCHHHHHHHHHCHHHHHHHCCCEEEEECCCCCCCCCHHHCCCHHHHHHHHHH FEGRKPVDVADAIRGLPPKRRYEVLKALNDDRLADILQELPELDQAEVLSQLGTERSADV HCCCCCCCHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHCCCCHHHH LEEMDPDDAADLLGVLNPTDAEMLLKRMDPGDSASVRRLLTHSPDTAGGLMTSNPVVLTP HHHCCCCHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEECCCEEECC DTAVAEALARARDPDLTAALSSMVFVVRPPTATPTGRYLGCVPLQRLLREAPAELVGGIV CHHHHHHHHHCCCCCHHHHHHCCEEEEECCCCCCCCCEECCHHHHHHHHHCHHHHHHHHH DSDLLTLRPETPLVAVTRYLAAYNLVCGPVVDDENHLLGAVTVDDLLDHLLPPDWRVDMQ CCCCEEECCCCCHHHHHHHHHHHHHHCCCEECCCCCEEEEEEHHHHHHHHCCCCCCCCHH ELDTAGRLEGLGGSG HCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA