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The map label for this gene is ycfF [C]

Identifier: 41408608

GI number: 41408608

Start: 2818708

End: 2819142

Strand: Direct

Name: ycfF [C]

Synonym: MAP2510

Alternate gene names: 41408608

Gene position: 2818708-2819142 (Clockwise)

Preceding gene: 41408606

Following gene: 41408609

Centisome position: 58.36

GC content: 70.11

Gene sequence:

>435_bases
ATGTCCTGCGTGTTCTGTGCGATCGTCGCCGGGGAGGCTCCGGCCATCCGGATCTACGAAGACGACGACTACCTGGCGAT
CCTCGACATCCGCCCGTTCACCCGCGGCCACACGCTGGTGCTGCCGAAGCGGCACAGCGTCGACCTCACCGACACCCCGC
CGGAGACGCTGGCCGGGATGGTGACCCTGGGCCAGCGCATCGCCCGGGCCGCCCGCAGCACGGAGCTGGCCGACGCCACC
AACATCGCGATCAACGACGGCAGCGCCGCCTTCCAGACGGTCTTCCACATCCACCTGCACGTCCTGCCGCGCCGCAACGG
CGACAAGCTGTCGGTGGCCAAGGGAATGCTGCTGCGCCGCGATCCCGACCGCGACGCCACCGGCCAGATCCTGCGCCTGG
CGCTGGCCCGCATCGACGCCAATCAGCCGGACTGA

Upstream 100 bases:

>100_bases
GAAGGCGAGATCGTTCACCGCCGCAGCGTATCCCGCGGGTCGGCCGGGCCGGCGCCGGCGGGGACGAGGCGGTCGCGGGC
CAACCAGTACCGTGGGCGAC

Downstream 100 bases:

>100_bases
GCCCGCCTCGGCCGCCCGCACGCCGCGCCCAACCCTGTCAAAGCCGCACTCCGCGCACGTCGGCAGCGGTTTAATTCCCT
GTAACTCGTGGTGAGGTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MSCVFCAIVAGEAPAIRIYEDDDYLAILDIRPFTRGHTLVLPKRHSVDLTDTPPETLAGMVTLGQRIARAARSTELADAT
NIAINDGSAAFQTVFHIHLHVLPRRNGDKLSVAKGMLLRRDPDRDATGQILRLALARIDANQPD

Sequences:

>Translated_144_residues
MSCVFCAIVAGEAPAIRIYEDDDYLAILDIRPFTRGHTLVLPKRHSVDLTDTPPETLAGMVTLGQRIARAARSTELADAT
NIAINDGSAAFQTVFHIHLHVLPRRNGDKLSVAKGMLLRRDPDRDATGQILRLALARIDANQPD
>Mature_143_residues
SCVFCAIVAGEAPAIRIYEDDDYLAILDIRPFTRGHTLVLPKRHSVDLTDTPPETLAGMVTLGQRIARAARSTELADATN
IAINDGSAAFQTVFHIHLHVLPRRNGDKLSVAKGMLLRRDPDRDATGQILRLALARIDANQPD

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17506713, Length=105, Percent_Identity=34.2857142857143, Blast_Score=66, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17556280, Length=96, Percent_Identity=35.4166666666667, Blast_Score=63, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6320078, Length=140, Percent_Identity=32.1428571428571, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 15765; Mature: 15634

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCVFCAIVAGEAPAIRIYEDDDYLAILDIRPFTRGHTLVLPKRHSVDLTDTPPETLAGM
CCEEEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHH
VTLGQRIARAARSTELADATNIAINDGSAAFQTVFHIHLHVLPRRNGDKLSVAKGMLLRR
HHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHEEEEEEEEEECCCCCEEEHHHCEEEEC
DPDRDATGQILRLALARIDANQPD
CCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SCVFCAIVAGEAPAIRIYEDDDYLAILDIRPFTRGHTLVLPKRHSVDLTDTPPETLAGM
CEEEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHH
VTLGQRIARAARSTELADATNIAINDGSAAFQTVFHIHLHVLPRRNGDKLSVAKGMLLRR
HHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHEEEEEEEEEECCCCCEEEHHHCEEEEC
DPDRDATGQILRLALARIDANQPD
CCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]