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The map label for this gene is rsbU

Identifier: 41408459

GI number: 41408459

Start: 2652338

End: 2654305

Strand: Direct

Name: rsbU

Synonym: MAP2361

Alternate gene names: NA

Gene position: 2652338-2654305 (Clockwise)

Preceding gene: 41408455

Following gene: 41408463

Centisome position: 54.92

GC content: 70.22

Gene sequence:

>1968_bases
ATGGTGGCCGAAAAGGACTGGGACAGAATCGTCGGCGCGGCCGATGACGTGCGCCGCGTCTTCGACAACGTCCCCGCGCT
GTTGGTCGGCCTGGAAGGGCCAGACCATCGATTCGTCGCGGTCAACGCCGCCTACCGCGCGCTCAGTCCGCCGGTCGACC
CGATCGGGCTGCTCGCCCGCGAGGTGTATCCCGAGCTGGAGAGCCAGCAAATCTTCCAGATGTTCGACCGGGTTTACCAG
ACCGGTGAGCCGCAGTCGGGAACCGAATGGCGGGTACAGGCCGACTTCGAAGGCGTGGGGAAGGCCCAGGAGCACTTCTT
CGATTTCATCGTCACGCCGCGCCGCGGCGACGACGGCTCGATCGAGGGCGTGCAGCTCGCCTTCGTCGACGTCACCGACC
GGGTGCGCAACCGGATGGCCGCCGAAGCGCGCCTCGAGGAGCTGTCCGAGCGGTACCGCAACGTGCGCGACTCCGCCACC
GTCATGCAGCAGGCGCTGCTGGCGCCGTCGGTGCCGGTGACCCCCGGCGCGGATGTGACCGCGGAGTATCTGGTGGCCGC
GCAGGACACCGCGGCCGGCGGCGACTGGTTCGATGCGATCCCGCTCGGGGATCGGTTGGTGCTCATCGTCGGTGACGTCG
TCGGCCATGGGGTGGAAGCGGCCGCGGTGATGTCCCAGCTGCGCACCGCGCTGCGGATGCAGATCCTGGCGGGATACCCG
ATCGCCGAAGCGCTCGAGGCGGTCGACCGCTTCCACAAGCACGTCCCGGGGTCCAGCTCGGCCACCATGTGCGTCGGCTC
GCTGGACTTCGGCAGCGGGGAATTCAGTTACTGCACAGCCGGACACCCGCCGCCGCTGCTGGTCACGGCGGACGCGACCG
CGCGCTACGTCGAGCCGTCCGGCGCGGGCCCGCTGGGCAGCGGCACCGGCTTTCCGGTCCGCACCGAATTCCTCGACGTG
GGCGACTCGATCCTGCTCTACACCGACGGCTTGATCGAACGGCCGGGCCGGCCCTTGGGAGCCAGCACCGCCGAATTCGC
GGACCTGGCCGCCAACATCGTCTCCGGTCAGGGCGGCTTCGTCATCGAATCGTCGGTGCGAACGGCCGACCGGCTCTGCG
CGGAGACGCTGGAGCTGCTGCTGCGCTCGACCGGCTACAGCGACGACGTGACTCTGCTTGCGGCGCAACGCCGCACACCG
CCACCCCCACTGAACTTGACGCTGGACGCGACGATTCACGCCGCGCGCACGGTGCGCACCCGGTTGCGGCAGTGGTTGTC
CGACGTCGGCGCCGACGCCGACGACATCTCCGACATCGTGCACGCCATCTCGGAGTTCGTCGAGAACGCGGTCGAGCACG
GCTACGCCACCGAGGTTCCCGACGGCGTGGTCGTCGAAGCGATGCTGGCCGGCGATGGCAACCTGCACGCCTCGGTGATC
GACCGGGGACGGTGGAAGGATCACCGGGAAGGCGAGACCGGCCGTGGCCGAGGCCTGGCCATGGCCGAGGCCCTGGTGTC
AGAGGCGCACGTCAGTCACGGCCCCGAGGGGACGACCGCCCGTGTGACGCACCGGCTTTCGCGCCCGGCCAATTTCGTCG
CCGACTCACTGGTCAGCCGGGCCGGCGACCACGGGGTGCGCAGCGCCGAATTCGTCTCCACGGTCACCGAGCCGGGCCGC
ATCGTGGTCAGCGGCGACGTCGACTCCAACACCGCGTCCACCCTGGACCGGCAGATCGCCGTCGAAAGCCGTTCCGGCGT
AGCGCCTTTGACGGTCGATCTGAGCGCGGTCACCCACCTCGGGTCGGCGGGCGTCAGCGCGCTGGCCGCCGCCCGGGAGC
GGGCGCTGCGCCAAGGCAGCGACTACGTGCTGGTGGCCCCGCCGGGAAGCCCGGCCCACCACGTCCTGTCGCTGGTGCAG
ATCCCGGTGGTCAGCGGCCTCGCCGAGAACGTCGTCGCCGAAGGTTAG

Upstream 100 bases:

>100_bases
CAACCATTGCTAATCTGAACAACTACGTGTGCAAATTGGTCAATCGATTGACCCGGTTTTCGCCACGGTCGCACCGGACG
GAGACCGCTAGGAGGGCCAA

Downstream 100 bases:

>100_bases
GACCGATCCGAGCGCTGCCCGTGCCGCACCTGGTTGAACGGCACCCCGCGGTCGGCGGCGTATTCCCGGGGGAAGCCCAG
CACCCGCTCGCCGATGACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 655; Mature: 655

Protein sequence:

>655_residues
MVAEKDWDRIVGAADDVRRVFDNVPALLVGLEGPDHRFVAVNAAYRALSPPVDPIGLLAREVYPELESQQIFQMFDRVYQ
TGEPQSGTEWRVQADFEGVGKAQEHFFDFIVTPRRGDDGSIEGVQLAFVDVTDRVRNRMAAEARLEELSERYRNVRDSAT
VMQQALLAPSVPVTPGADVTAEYLVAAQDTAAGGDWFDAIPLGDRLVLIVGDVVGHGVEAAAVMSQLRTALRMQILAGYP
IAEALEAVDRFHKHVPGSSSATMCVGSLDFGSGEFSYCTAGHPPPLLVTADATARYVEPSGAGPLGSGTGFPVRTEFLDV
GDSILLYTDGLIERPGRPLGASTAEFADLAANIVSGQGGFVIESSVRTADRLCAETLELLLRSTGYSDDVTLLAAQRRTP
PPPLNLTLDATIHAARTVRTRLRQWLSDVGADADDISDIVHAISEFVENAVEHGYATEVPDGVVVEAMLAGDGNLHASVI
DRGRWKDHREGETGRGRGLAMAEALVSEAHVSHGPEGTTARVTHRLSRPANFVADSLVSRAGDHGVRSAEFVSTVTEPGR
IVVSGDVDSNTASTLDRQIAVESRSGVAPLTVDLSAVTHLGSAGVSALAAARERALRQGSDYVLVAPPGSPAHHVLSLVQ
IPVVSGLAENVVAEG

Sequences:

>Translated_655_residues
MVAEKDWDRIVGAADDVRRVFDNVPALLVGLEGPDHRFVAVNAAYRALSPPVDPIGLLAREVYPELESQQIFQMFDRVYQ
TGEPQSGTEWRVQADFEGVGKAQEHFFDFIVTPRRGDDGSIEGVQLAFVDVTDRVRNRMAAEARLEELSERYRNVRDSAT
VMQQALLAPSVPVTPGADVTAEYLVAAQDTAAGGDWFDAIPLGDRLVLIVGDVVGHGVEAAAVMSQLRTALRMQILAGYP
IAEALEAVDRFHKHVPGSSSATMCVGSLDFGSGEFSYCTAGHPPPLLVTADATARYVEPSGAGPLGSGTGFPVRTEFLDV
GDSILLYTDGLIERPGRPLGASTAEFADLAANIVSGQGGFVIESSVRTADRLCAETLELLLRSTGYSDDVTLLAAQRRTP
PPPLNLTLDATIHAARTVRTRLRQWLSDVGADADDISDIVHAISEFVENAVEHGYATEVPDGVVVEAMLAGDGNLHASVI
DRGRWKDHREGETGRGRGLAMAEALVSEAHVSHGPEGTTARVTHRLSRPANFVADSLVSRAGDHGVRSAEFVSTVTEPGR
IVVSGDVDSNTASTLDRQIAVESRSGVAPLTVDLSAVTHLGSAGVSALAAARERALRQGSDYVLVAPPGSPAHHVLSLVQ
IPVVSGLAENVVAEG
>Mature_655_residues
MVAEKDWDRIVGAADDVRRVFDNVPALLVGLEGPDHRFVAVNAAYRALSPPVDPIGLLAREVYPELESQQIFQMFDRVYQ
TGEPQSGTEWRVQADFEGVGKAQEHFFDFIVTPRRGDDGSIEGVQLAFVDVTDRVRNRMAAEARLEELSERYRNVRDSAT
VMQQALLAPSVPVTPGADVTAEYLVAAQDTAAGGDWFDAIPLGDRLVLIVGDVVGHGVEAAAVMSQLRTALRMQILAGYP
IAEALEAVDRFHKHVPGSSSATMCVGSLDFGSGEFSYCTAGHPPPLLVTADATARYVEPSGAGPLGSGTGFPVRTEFLDV
GDSILLYTDGLIERPGRPLGASTAEFADLAANIVSGQGGFVIESSVRTADRLCAETLELLLRSTGYSDDVTLLAAQRRTP
PPPLNLTLDATIHAARTVRTRLRQWLSDVGADADDISDIVHAISEFVENAVEHGYATEVPDGVVVEAMLAGDGNLHASVI
DRGRWKDHREGETGRGRGLAMAEALVSEAHVSHGPEGTTARVTHRLSRPANFVADSLVSRAGDHGVRSAEFVSTVTEPGR
IVVSGDVDSNTASTLDRQIAVESRSGVAPLTVDLSAVTHLGSAGVSALAAARERALRQGSDYVLVAPPGSPAHHVLSLVQ
IPVVSGLAENVVAEG

Specific function: Unknown

COG id: COG2208

COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR001932
- InterPro:   IPR002645
- InterPro:   IPR010822 [H]

Pfam domain/function: PF02518 HATPase_c; PF08448 PAS_4; PF07228 SpoIIE; PF01740 STAS [H]

EC number: NA

Molecular weight: Translated: 69541; Mature: 69541

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAEKDWDRIVGAADDVRRVFDNVPALLVGLEGPDHRFVAVNAAYRALSPPVDPIGLLAR
CCCCCCHHHHHCCHHHHHHHHHCCCEEEEECCCCCCEEEEEEHHHHHCCCCCCHHHHHHH
EVYPELESQQIFQMFDRVYQTGEPQSGTEWRVQADFEGVGKAQEHFFDFIVTPRRGDDGS
HHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHEECCCCCCCCC
IEGVQLAFVDVTDRVRNRMAAEARLEELSERYRNVRDSATVMQQALLAPSVPVTPGADVT
CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
AEYLVAAQDTAAGGDWFDAIPLGDRLVLIVGDVVGHGVEAAAVMSQLRTALRMQILAGYP
HHHHEEECCCCCCCCCEECCCCCCEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
IAEALEAVDRFHKHVPGSSSATMCVGSLDFGSGEFSYCTAGHPPPLLVTADATARYVEPS
HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEECCCCCCEEEECCCCEEEECCC
GAGPLGSGTGFPVRTEFLDVGDSILLYTDGLIERPGRPLGASTAEFADLAANIVSGQGGF
CCCCCCCCCCCCEEHHHHHCCCEEEEEECCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCE
VIESSVRTADRLCAETLELLLRSTGYSDDVTLLAAQRRTPPPPLNLTLDATIHAARTVRT
EEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEECHHHHHHHHHHH
RLRQWLSDVGADADDISDIVHAISEFVENAVEHGYATEVPDGVVVEAMLAGDGNLHASVI
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEHHHH
DRGRWKDHREGETGRGRGLAMAEALVSEAHVSHGPEGTTARVTHRLSRPANFVADSLVSR
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHH
AGDHGVRSAEFVSTVTEPGRIVVSGDVDSNTASTLDRQIAVESRSGVAPLTVDLSAVTHL
CCCCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHEECCCCCCCEEEEEHHHHHHH
GSAGVSALAAARERALRQGSDYVLVAPPGSPAHHVLSLVQIPVVSGLAENVVAEG
HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVAEKDWDRIVGAADDVRRVFDNVPALLVGLEGPDHRFVAVNAAYRALSPPVDPIGLLAR
CCCCCCHHHHHCCHHHHHHHHHCCCEEEEECCCCCCEEEEEEHHHHHCCCCCCHHHHHHH
EVYPELESQQIFQMFDRVYQTGEPQSGTEWRVQADFEGVGKAQEHFFDFIVTPRRGDDGS
HHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHEECCCCCCCCC
IEGVQLAFVDVTDRVRNRMAAEARLEELSERYRNVRDSATVMQQALLAPSVPVTPGADVT
CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
AEYLVAAQDTAAGGDWFDAIPLGDRLVLIVGDVVGHGVEAAAVMSQLRTALRMQILAGYP
HHHHEEECCCCCCCCCEECCCCCCEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
IAEALEAVDRFHKHVPGSSSATMCVGSLDFGSGEFSYCTAGHPPPLLVTADATARYVEPS
HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEECCCCCCEEEECCCCEEEECCC
GAGPLGSGTGFPVRTEFLDVGDSILLYTDGLIERPGRPLGASTAEFADLAANIVSGQGGF
CCCCCCCCCCCCEEHHHHHCCCEEEEEECCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCE
VIESSVRTADRLCAETLELLLRSTGYSDDVTLLAAQRRTPPPPLNLTLDATIHAARTVRT
EEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEECHHHHHHHHHHH
RLRQWLSDVGADADDISDIVHAISEFVENAVEHGYATEVPDGVVVEAMLAGDGNLHASVI
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEHHHH
DRGRWKDHREGETGRGRGLAMAEALVSEAHVSHGPEGTTARVTHRLSRPANFVADSLVSR
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHH
AGDHGVRSAEFVSTVTEPGRIVVSGDVDSNTASTLDRQIAVESRSGVAPLTVDLSAVTHL
CCCCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHEECCCCCCCEEEEEHHHHHHH
GSAGVSALAAARERALRQGSDYVLVAPPGSPAHHVLSLVQIPVVSGLAENVVAEG
HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]