| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408455
Identifier: 41408455
GI number: 41408455
Start: 2648188
End: 2649396
Strand: Direct
Name: 41408455
Synonym: MAP2357
Alternate gene names: NA
Gene position: 2648188-2649396 (Clockwise)
Preceding gene: 41408454
Following gene: 41408459
Centisome position: 54.83
GC content: 66.0
Gene sequence:
>1209_bases ATGCCGTCTCGCGAGCTTCCCTTCCCGGTGTTCGATGCCGACAACCACATGTACGAGCCGCAGGAAGCGCTGACCAAGTT CCTGCCGGACCACCGCAAGCACGTCATCGACTACGTCCAGATCCGCGGCCGGACCAAGATCGTGGTGCGCGGCCACATCA GCGAATACATCCCCAACCCGACGTTCGAAGTGGTGGCCCGTCCCGGCGCCCAGGAGGAGTACTTCCGCAACGGCTCGGGT GGCAAGAGCTACCGCGAAATCCTCGGCGAGCCGATGAAGGCCATTCCGGCCTTCCGCGAACCCGGCGCCCGGCTGGAGGT GATGGACGAACTCGGCATCGACTACGCGCTGATGTTCCCCACCCTGGCCAGCCTGGTCGAGGAGCGCATGAAGGACGACC CGGAGATGACGCACGACGTCATCCACGCGCTCAACCAGTGGATGTACGAGCAGTGGTCGTTCAACTACAAGGACCGCATC TTCGCCACCCCGGTGATCACGTTGCCGATCGTCGACCGCGCGCTCGAGGAGCTCGAGTGGTGCCTCGAGCGCGGCGCCCG CACCGTGCTGGTCCGGCCCGCGCCGGTGCCCGGCTACCGCGGCAGCCGCTCGTTCGGCTTCGAGGAGTTCGACCCGTTCT GGCAGGCCTGCGTGCGGGCCGAGATCCCCGTCTCGATGCACGCCTCGGACAGCGGCTACTCCGAGCTGCTCAACATCTGG GAACCCGGCGACGAGTTCCTGCCGTTCAAGCCCACCGCCTTCCGCAGCCTGGCCATGGGGCACCGGCCCGTCGAGGACGC GTTCGGCGCGTTGATCTGCCACGGCGCGCTGTCCCGCAACCCCGACCTGCGCATCCTGTCCATCGAGAACGGCGCAGACT GGGTGCCGCACCTGTTCAAGGGCCTCAAGGGCGTGTACAAGAAGATGCCGCAGGCGTTCGCCGAGGATCCGATCGAGACG TTCAAGCGGTGCGTCTACGTCAGCCCGTTCTGGGAGGACCGATTCGCCGAGATCGTCAACATGGTGGGCACCGACCGGGT GGTGTTCGGATCGGACTGGCCGCACCCCGAGGGTTTGAAGGACCCGATCAGCTTCGTCGACGAGCTGGCCGATTTCAGCG ACGAGGACAAGGCGAAGATCATGGGCGGCAACCTGATGAAGCTGATGAAGGTGTCCGCGCCGGCCGCCAAGAAGCCCGTC TCGGCCTGA
Upstream 100 bases:
>100_bases GCGACGAATACGGCCGAACGGGCAGGTACACCTTGTTCCGCACAAGTGGTAACGTCATTACCACACAGTGAGAATTACAG CCTTCTGCAAGGAGATCGCC
Downstream 100 bases:
>100_bases TCTCGCGCCCCTGCCGCGGCGCGGCGTGTAACCGACGCCGCGGCAGGGTATCCGCCGCAGCGTGGCATCCCCCGGCCGGG AACGGATCGACATCGACGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MPSRELPFPVFDADNHMYEPQEALTKFLPDHRKHVIDYVQIRGRTKIVVRGHISEYIPNPTFEVVARPGAQEEYFRNGSG GKSYREILGEPMKAIPAFREPGARLEVMDELGIDYALMFPTLASLVEERMKDDPEMTHDVIHALNQWMYEQWSFNYKDRI FATPVITLPIVDRALEELEWCLERGARTVLVRPAPVPGYRGSRSFGFEEFDPFWQACVRAEIPVSMHASDSGYSELLNIW EPGDEFLPFKPTAFRSLAMGHRPVEDAFGALICHGALSRNPDLRILSIENGADWVPHLFKGLKGVYKKMPQAFAEDPIET FKRCVYVSPFWEDRFAEIVNMVGTDRVVFGSDWPHPEGLKDPISFVDELADFSDEDKAKIMGGNLMKLMKVSAPAAKKPV SA
Sequences:
>Translated_402_residues MPSRELPFPVFDADNHMYEPQEALTKFLPDHRKHVIDYVQIRGRTKIVVRGHISEYIPNPTFEVVARPGAQEEYFRNGSG GKSYREILGEPMKAIPAFREPGARLEVMDELGIDYALMFPTLASLVEERMKDDPEMTHDVIHALNQWMYEQWSFNYKDRI FATPVITLPIVDRALEELEWCLERGARTVLVRPAPVPGYRGSRSFGFEEFDPFWQACVRAEIPVSMHASDSGYSELLNIW EPGDEFLPFKPTAFRSLAMGHRPVEDAFGALICHGALSRNPDLRILSIENGADWVPHLFKGLKGVYKKMPQAFAEDPIET FKRCVYVSPFWEDRFAEIVNMVGTDRVVFGSDWPHPEGLKDPISFVDELADFSDEDKAKIMGGNLMKLMKVSAPAAKKPV SA >Mature_401_residues PSRELPFPVFDADNHMYEPQEALTKFLPDHRKHVIDYVQIRGRTKIVVRGHISEYIPNPTFEVVARPGAQEEYFRNGSGG KSYREILGEPMKAIPAFREPGARLEVMDELGIDYALMFPTLASLVEERMKDDPEMTHDVIHALNQWMYEQWSFNYKDRIF ATPVITLPIVDRALEELEWCLERGARTVLVRPAPVPGYRGSRSFGFEEFDPFWQACVRAEIPVSMHASDSGYSELLNIWE PGDEFLPFKPTAFRSLAMGHRPVEDAFGALICHGALSRNPDLRILSIENGADWVPHLFKGLKGVYKKMPQAFAEDPIETF KRCVYVSPFWEDRFAEIVNMVGTDRVVFGSDWPHPEGLKDPISFVDELADFSDEDKAKIMGGNLMKLMKVSAPAAKKPVS A
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45742; Mature: 45611
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSRELPFPVFDADNHMYEPQEALTKFLPDHRKHVIDYVQIRGRTKIVVRGHISEYIPNP CCCCCCCCCEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEECHHHHCCCC TFEVVARPGAQEEYFRNGSGGKSYREILGEPMKAIPAFREPGARLEVMDELGIDYALMFP CCEEEECCCCHHHHHHCCCCCHHHHHHHCCCHHHCCHHCCCCCCCHHHHHHCCCHHHHHH TLASLVEERMKDDPEMTHDVIHALNQWMYEQWSFNYKDRIFATPVITLPIVDRALEELEW HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHH CLERGARTVLVRPAPVPGYRGSRSFGFEEFDPFWQACVRAEIPVSMHASDSGYSELLNIW HHHCCCCEEEEECCCCCCCCCCCCCCCHHCCHHHHHHHHHCCCCEECCCCCCHHHHHHHC EPGDEFLPFKPTAFRSLAMGHRPVEDAFGALICHGALSRNPDLRILSIENGADWVPHLFK CCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHH GLKGVYKKMPQAFAEDPIETFKRCVYVSPFWEDRFAEIVNMVGTDRVVFGSDWPHPEGLK HHHHHHHHHHHHHHCCHHHHHHHHEECCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCC DPISFVDELADFSDEDKAKIMGGNLMKLMKVSAPAAKKPVSA HHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PSRELPFPVFDADNHMYEPQEALTKFLPDHRKHVIDYVQIRGRTKIVVRGHISEYIPNP CCCCCCCCEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEECHHHHCCCC TFEVVARPGAQEEYFRNGSGGKSYREILGEPMKAIPAFREPGARLEVMDELGIDYALMFP CCEEEECCCCHHHHHHCCCCCHHHHHHHCCCHHHCCHHCCCCCCCHHHHHHCCCHHHHHH TLASLVEERMKDDPEMTHDVIHALNQWMYEQWSFNYKDRIFATPVITLPIVDRALEELEW HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHH CLERGARTVLVRPAPVPGYRGSRSFGFEEFDPFWQACVRAEIPVSMHASDSGYSELLNIW HHHCCCCEEEEECCCCCCCCCCCCCCCHHCCHHHHHHHHHCCCCEECCCCCCHHHHHHHC EPGDEFLPFKPTAFRSLAMGHRPVEDAFGALICHGALSRNPDLRILSIENGADWVPHLFK CCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHH GLKGVYKKMPQAFAEDPIETFKRCVYVSPFWEDRFAEIVNMVGTDRVVFGSDWPHPEGLK HHHHHHHHHHHHHHCCHHHHHHHHEECCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCC DPISFVDELADFSDEDKAKIMGGNLMKLMKVSAPAAKKPVSA HHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA