| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is fabG [H]
Identifier: 41407573
GI number: 41407573
Start: 1614838
End: 1615737
Strand: Direct
Name: fabG [H]
Synonym: MAP1475
Alternate gene names: 41407573
Gene position: 1614838-1615737 (Clockwise)
Preceding gene: 41407569
Following gene: 41407576
Centisome position: 33.44
GC content: 72.22
Gene sequence:
>900_bases GTGGCCGCGGTGAGCGGCGCCGATGCGTTACTGTCCGGGCGCGGCGCGGTGGTGTCGGGCGGCAGCCGCGGCATCGGGCG CGCGGTCGCCGAACTGCTGGCCGGCCTGGGCGCCGGGGTGGTCGTCAACGGCCGCGACCCGCAGGCCGTGCAGGAGACGG TTGCGGCGATCACCGCGGCCGGGGGGCGGGCCACCGCGGTGGTGGGCGCCGCCGACGACGAGCGCATCGCCCGAAGCCTC GTCGACGAGTGCATCGGCGCGTTCGGGCGGCTGGACGCCTTGATCAACTGCGCCGGCATCGCCGAACCCGCGGGCTCGTC GATCCTGAACATCACCGCCGACGAATTCGACCACCTCATCGGCGCCCACCTGGGCACCGCTTTCCACACCTGCCGGGCGG CCGCCCCGGTCATGGTCGAGCAGCGGCACGGGTCCATCGTCAACACCAGCTCGGTGGCGTTCCTGGGCGACTACGGCGGG ACCGGCTACCCGGCGGGCAAGGGTGCCGTCAACGCGCTGACCATGGCCATCGCCGCCGAACTGAAGGCCTACGGCGTCCG GGCCAACGTGGTGTGTCCCGGCGCCCGGACACGGCTGTCCACCGGCGCCGACTACGAACGACACATCGAGGACCTGCACC GTCGCGGGCTGCTCGACGACATGACCAGGCAGGCCTCGCTGGACAGCGCCCCGCCCGTCTTCGTGGCGCCGGTCTACGGT TACCTCGTCAGCGACTTGGCGCGCGACGTGACGGGCCAAATCCTTGTCGCCGCAGGCGGTTTCGTGGGCAGCTTCGACCG TCAAACACCGCGCCTGCTGGGCTACCGCGATCATCATCGGGCCGGGCCGTGGTCGATCGAGGAGGTGCACACGATGATCG GCGCGGCGGCGACGCCATGA
Upstream 100 bases:
>100_bases GGCTAATGTTCGACATCCCTGCCGGGCGGCTCGCCGGCATCCGATCGCGAAAACCGTTCGCGCGCAAGATTTTACCTCGC CCGGATGCCGGCGCTGGGCG
Downstream 100 bases:
>100_bases CCCGCCGGATCCGGACGTGCCGACGATTGCGGCCTACACCCGGTCGGTGGTGAAGTCGACCGCCTGATCGACCATCCCCG CCTCGACGTACTGCCGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MAAVSGADALLSGRGAVVSGGSRGIGRAVAELLAGLGAGVVVNGRDPQAVQETVAAITAAGGRATAVVGAADDERIARSL VDECIGAFGRLDALINCAGIAEPAGSSILNITADEFDHLIGAHLGTAFHTCRAAAPVMVEQRHGSIVNTSSVAFLGDYGG TGYPAGKGAVNALTMAIAAELKAYGVRANVVCPGARTRLSTGADYERHIEDLHRRGLLDDMTRQASLDSAPPVFVAPVYG YLVSDLARDVTGQILVAAGGFVGSFDRQTPRLLGYRDHHRAGPWSIEEVHTMIGAAATP
Sequences:
>Translated_299_residues MAAVSGADALLSGRGAVVSGGSRGIGRAVAELLAGLGAGVVVNGRDPQAVQETVAAITAAGGRATAVVGAADDERIARSL VDECIGAFGRLDALINCAGIAEPAGSSILNITADEFDHLIGAHLGTAFHTCRAAAPVMVEQRHGSIVNTSSVAFLGDYGG TGYPAGKGAVNALTMAIAAELKAYGVRANVVCPGARTRLSTGADYERHIEDLHRRGLLDDMTRQASLDSAPPVFVAPVYG YLVSDLARDVTGQILVAAGGFVGSFDRQTPRLLGYRDHHRAGPWSIEEVHTMIGAAATP >Mature_298_residues AAVSGADALLSGRGAVVSGGSRGIGRAVAELLAGLGAGVVVNGRDPQAVQETVAAITAAGGRATAVVGAADDERIARSLV DECIGAFGRLDALINCAGIAEPAGSSILNITADEFDHLIGAHLGTAFHTCRAAAPVMVEQRHGSIVNTSSVAFLGDYGGT GYPAGKGAVNALTMAIAAELKAYGVRANVVCPGARTRLSTGADYERHIEDLHRRGLLDDMTRQASLDSAPPVFVAPVYGY LVSDLARDVTGQILVAAGGFVGSFDRQTPRLLGYRDHHRAGPWSIEEVHTMIGAAATP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI4504505, Length=296, Percent_Identity=28.0405405405405, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI15277342, Length=259, Percent_Identity=32.4324324324324, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI40254992, Length=195, Percent_Identity=34.8717948717949, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI32483357, Length=262, Percent_Identity=29.0076335877863, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI4758504, Length=202, Percent_Identity=32.6732673267327, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI19923817, Length=267, Percent_Identity=25.4681647940075, Blast_Score=72, Evalue=9e-13, Organism=Homo sapiens, GI4503817, Length=189, Percent_Identity=29.6296296296296, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI66933014, Length=191, Percent_Identity=29.3193717277487, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI5031737, Length=190, Percent_Identity=30.5263157894737, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI33667109, Length=190, Percent_Identity=30.5263157894737, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI83715985, Length=194, Percent_Identity=32.4742268041237, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI59889578, Length=118, Percent_Identity=35.5932203389831, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI20149619, Length=228, Percent_Identity=26.7543859649123, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI87082100, Length=254, Percent_Identity=28.740157480315, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1787335, Length=252, Percent_Identity=29.7619047619048, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI2367175, Length=192, Percent_Identity=38.0208333333333, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI87082160, Length=266, Percent_Identity=27.8195488721804, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1786812, Length=258, Percent_Identity=31.0077519379845, Blast_Score=85, Evalue=7e-18, Organism=Escherichia coli, GI1789378, Length=256, Percent_Identity=29.6875, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1789208, Length=252, Percent_Identity=28.968253968254, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1788459, Length=271, Percent_Identity=27.3062730627306, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1790717, Length=254, Percent_Identity=25.1968503937008, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI1787905, Length=257, Percent_Identity=27.6264591439689, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17568967, Length=264, Percent_Identity=29.9242424242424, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI71994604, Length=259, Percent_Identity=30.5019305019305, Blast_Score=97, Evalue=9e-21, Organism=Caenorhabditis elegans, GI25147288, Length=256, Percent_Identity=32.421875, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17562908, Length=268, Percent_Identity=31.3432835820896, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI71994600, Length=262, Percent_Identity=29.3893129770992, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17561402, Length=268, Percent_Identity=29.1044776119403, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17560332, Length=263, Percent_Identity=29.6577946768061, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17562910, Length=196, Percent_Identity=32.6530612244898, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17560676, Length=267, Percent_Identity=27.3408239700375, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI193204405, Length=198, Percent_Identity=32.3232323232323, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17531453, Length=267, Percent_Identity=30.7116104868914, Blast_Score=85, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17562906, Length=199, Percent_Identity=33.6683417085427, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17544670, Length=192, Percent_Identity=31.25, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI17555706, Length=269, Percent_Identity=28.996282527881, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17538486, Length=262, Percent_Identity=29.3893129770992, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17560220, Length=194, Percent_Identity=32.4742268041237, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17551412, Length=191, Percent_Identity=29.8429319371728, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17559104, Length=187, Percent_Identity=31.5508021390374, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17564282, Length=190, Percent_Identity=30, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17560150, Length=193, Percent_Identity=28.4974093264249, Blast_Score=78, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17562904, Length=268, Percent_Identity=26.1194029850746, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17538480, Length=191, Percent_Identity=30.8900523560209, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI72000259, Length=212, Percent_Identity=29.7169811320755, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17538182, Length=199, Percent_Identity=32.1608040201005, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17563726, Length=193, Percent_Identity=27.979274611399, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17565030, Length=192, Percent_Identity=31.7708333333333, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI71997099, Length=201, Percent_Identity=28.8557213930348, Blast_Score=71, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17562990, Length=191, Percent_Identity=27.2251308900524, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17508895, Length=190, Percent_Identity=27.3684210526316, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=262, Percent_Identity=29.7709923664122, Blast_Score=98, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6324126, Length=269, Percent_Identity=26.3940520446097, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI28571526, Length=257, Percent_Identity=33.852140077821, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI21357041, Length=257, Percent_Identity=33.0739299610895, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI18859837, Length=257, Percent_Identity=31.5175097276265, Blast_Score=95, Evalue=6e-20, Organism=Drosophila melanogaster, GI24644339, Length=262, Percent_Identity=29.7709923664122, Blast_Score=94, Evalue=7e-20, Organism=Drosophila melanogaster, GI21355319, Length=259, Percent_Identity=28.957528957529, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI23397609, Length=261, Percent_Identity=29.5019157088123, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24639444, Length=263, Percent_Identity=29.277566539924, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI17737361, Length=190, Percent_Identity=31.0526315789474, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24643142, Length=195, Percent_Identity=29.7435897435897, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI21357673, Length=203, Percent_Identity=28.0788177339901, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI21356301, Length=190, Percent_Identity=30.5263157894737, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 30565; Mature: 30434
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVSGADALLSGRGAVVSGGSRGIGRAVAELLAGLGAGVVVNGRDPQAVQETVAAITAA CCCCCCCHHHHCCCCCEEECCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCC GGRATAVVGAADDERIARSLVDECIGAFGRLDALINCAGIAEPAGSSILNITADEFDHLI CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHH GAHLGTAFHTCRAAAPVMVEQRHGSIVNTSSVAFLGDYGGTGYPAGKGAVNALTMAIAAE HHHHHHHHHHHHHCCCCEEECCCCCEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH LKAYGVRANVVCPGARTRLSTGADYERHIEDLHRRGLLDDMTRQASLDSAPPVFVAPVYG HHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEHHHHH YLVSDLARDVTGQILVAAGGFVGSFDRQTPRLLGYRDHHRAGPWSIEEVHTMIGAAATP HHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure AAVSGADALLSGRGAVVSGGSRGIGRAVAELLAGLGAGVVVNGRDPQAVQETVAAITAA CCCCCCHHHHCCCCCEEECCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCC GGRATAVVGAADDERIARSLVDECIGAFGRLDALINCAGIAEPAGSSILNITADEFDHLI CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHH GAHLGTAFHTCRAAAPVMVEQRHGSIVNTSSVAFLGDYGGTGYPAGKGAVNALTMAIAAE HHHHHHHHHHHHHCCCCEEECCCCCEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH LKAYGVRANVVCPGARTRLSTGADYERHIEDLHRRGLLDDMTRQASLDSAPPVFVAPVYG HHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEHHHHH YLVSDLARDVTGQILVAAGGFVGSFDRQTPRLLGYRDHHRAGPWSIEEVHTMIGAAATP HHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8759840; 9384377; 9534248; 8654983 [H]