| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407559
Identifier: 41407559
GI number: 41407559
Start: 1599076
End: 1599513
Strand: Direct
Name: 41407559
Synonym: MAP1461
Alternate gene names: NA
Gene position: 1599076-1599513 (Clockwise)
Preceding gene: 41407558
Following gene: 41407560
Centisome position: 33.11
GC content: 68.26
Gene sequence:
>438_bases ATGACCGAGCTGTGCTACGACGACGTCAGCGTGGGCGATCACATCCCCACCTTGACCGTCACCGTCGACGAAACCCAGAT GTTCTTCTTCAGCGCCGCCACTTACAACGGTCACCGCATCCACTACGACAAAGAGTGGGCCCGCGCCGAGGGATACGACG ATGTGCTGGTGCACGGCGCGCTTCAGGCGGCGCTGCTGGCCCGCGCGCTGGGGGACTGGATCGGCGGACGCGGACGACTG GTGTCGTTCTCGGTGCAGAACCGGGCGGTCGCCTATCCGGGCGAACCGCTCAGTTTCGGCGGCCGGGTCACCGGCAAGCG GCTGGACGAAAGCGGCTCCGGCCTGGTCGATTTGGACATCGCCGGCCGGCGCGACGACACCGTGCTGATGCCCGGCACGG CCACCGTGCAGCTGCCGCGGCGGGAAGCCCGGTCGTGA
Upstream 100 bases:
>100_bases GGCACACGGTGTACCGCAACCAGCACGACGAGCTGCTGGCCGAGGCGTCGACGTCGATGATCGCCCGACCCTAGCAAGAG CCGACCGAGAAAAGGCCGCC
Downstream 100 bases:
>100_bases CCGGGCTGCGCGGCGAAGCGGCGATCGTCGGCATCGCGGAGCTGCCGGCCGAGCGACGGCCGACCGGTCCGCCGCGGTTC ACCCTCGACCAGTACGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MTELCYDDVSVGDHIPTLTVTVDETQMFFFSAATYNGHRIHYDKEWARAEGYDDVLVHGALQAALLARALGDWIGGRGRL VSFSVQNRAVAYPGEPLSFGGRVTGKRLDESGSGLVDLDIAGRRDDTVLMPGTATVQLPRREARS
Sequences:
>Translated_145_residues MTELCYDDVSVGDHIPTLTVTVDETQMFFFSAATYNGHRIHYDKEWARAEGYDDVLVHGALQAALLARALGDWIGGRGRL VSFSVQNRAVAYPGEPLSFGGRVTGKRLDESGSGLVDLDIAGRRDDTVLMPGTATVQLPRREARS >Mature_144_residues TELCYDDVSVGDHIPTLTVTVDETQMFFFSAATYNGHRIHYDKEWARAEGYDDVLVHGALQAALLARALGDWIGGRGRLV SFSVQNRAVAYPGEPLSFGGRVTGKRLDESGSGLVDLDIAGRRDDTVLMPGTATVQLPRREARS
Specific function: Unknown
COG id: COG3777
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15842; Mature: 15711
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELCYDDVSVGDHIPTLTVTVDETQMFFFSAATYNGHRIHYDKEWARAEGYDDVLVHGA CCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEECCCEEEEECCCHHHCCCCCHHHHHHH LQAALLARALGDWIGGRGRLVSFSVQNRAVAYPGEPLSFGGRVTGKRLDESGSGLVDLDI HHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCCCCCCCCEECCCCCCCCCCCEEEEEE AGRRDDTVLMPGTATVQLPRREARS CCCCCCEEEECCCEEEEECCHHCCC >Mature Secondary Structure TELCYDDVSVGDHIPTLTVTVDETQMFFFSAATYNGHRIHYDKEWARAEGYDDVLVHGA CCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEECCCEEEEECCCHHHCCCCCHHHHHHH LQAALLARALGDWIGGRGRLVSFSVQNRAVAYPGEPLSFGGRVTGKRLDESGSGLVDLDI HHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCCCCCCCCEECCCCCCCCCCCEEEEEE AGRRDDTVLMPGTATVQLPRREARS CCCCCCEEEECCCEEEEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA