Click here to switch to the map view.

The map label for this gene is scpA [H]

Identifier: 41407509

GI number: 41407509

Start: 1524289

End: 1525107

Strand: Direct

Name: scpA [H]

Synonym: MAP1411

Alternate gene names: 41407509

Gene position: 1524289-1525107 (Clockwise)

Preceding gene: 41407508

Following gene: 41407510

Centisome position: 31.56

GC content: 67.89

Gene sequence:

>819_bases
GTGAACGCGACCGCAAACGGTGAGGCGCAACCCCAGACCGGTTTTCAGGTCCGCCTGACCAATTTCGAGGGGCCGTTCGA
CCTGCTGCTGCAGCTGATCTTCGCCCACCGGCTGGACGTGACCGAGGTGGCGCTGCACCAGGTCACCGACGACTTCATCG
CCTACACCCGCGAGATCGGCCCCAAGCTGGAGCTGGAGGAGACCACCGCGTTCCTGGTCGTCGCCGCCACCCTGCTCGAC
CTGAAGGCCGCCCGGCTGCTGCCGGCCGGACAGGTCGACGACGACGAAGACCTCGCCCTGCTGGAGGTGCGCGACCTGCT
GTTCGCCCGGCTGCTGCAGTACCGGGCGTTCAAGCACGTCGCCGAGATGTTCGCCGAGCTGGAGGCCAGCGCCCTGCGCA
GCTATCCGCGCGCGGTGTCGCTGGAGGACCGGTTCACCCAGCTGCTGCCCGAGGTGATGCTGGGCGTCGACGCCGAACGG
TTCGCCCAGATCGCGGCGGTCGCGTTCAGCCCGCGGCCCGTTCCGACGGTGTCGGTGGGGCACCTGCACGAGGTGAAGGT
CTCGGTCCCCGAGCAGGCGCGCAAGTTGCTGGCCATCCTGGAAGCGCGGGGCAGCGGGCAGTGGGCGACGTTCTCCGAGC
TGGTCGCCGACTGCGAGGGATCAATGGAGGTGGTGGGCCGGTTCCTGGCGCTGCTCGAACTGTATCGGTCCCGGGCGGTA
GCATTCGAGCAGTCAGAGCCGCTTGGCGTGCTCCAAATCTCGTGGACCGGGGAACGTCCGGTCGGTGAAACCTTGGTAGA
AGTGCGGGACGAATTGTGA

Upstream 100 bases:

>100_bases
CCAGCGTGGCAGGCGAGCCCATCACCACCTGGGCCCCGCGCTCCACCGGGGCCATCGCTTACCGCGCGCTGGCCCGCGAG
TTCATCGACCGATTCGGCGC

Downstream 100 bases:

>100_bases
GCGAGAACGCGCCGGACGTCGATCTCGACTCCGAGCTCGAGGCAGGCATCCCGGAGATCGCCGAGGCCGCGCCCATGGAG
TCCGGGGAACTCGGGTCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MNATANGEAQPQTGFQVRLTNFEGPFDLLLQLIFAHRLDVTEVALHQVTDDFIAYTREIGPKLELEETTAFLVVAATLLD
LKAARLLPAGQVDDDEDLALLEVRDLLFARLLQYRAFKHVAEMFAELEASALRSYPRAVSLEDRFTQLLPEVMLGVDAER
FAQIAAVAFSPRPVPTVSVGHLHEVKVSVPEQARKLLAILEARGSGQWATFSELVADCEGSMEVVGRFLALLELYRSRAV
AFEQSEPLGVLQISWTGERPVGETLVEVRDEL

Sequences:

>Translated_272_residues
MNATANGEAQPQTGFQVRLTNFEGPFDLLLQLIFAHRLDVTEVALHQVTDDFIAYTREIGPKLELEETTAFLVVAATLLD
LKAARLLPAGQVDDDEDLALLEVRDLLFARLLQYRAFKHVAEMFAELEASALRSYPRAVSLEDRFTQLLPEVMLGVDAER
FAQIAAVAFSPRPVPTVSVGHLHEVKVSVPEQARKLLAILEARGSGQWATFSELVADCEGSMEVVGRFLALLELYRSRAV
AFEQSEPLGVLQISWTGERPVGETLVEVRDEL
>Mature_272_residues
MNATANGEAQPQTGFQVRLTNFEGPFDLLLQLIFAHRLDVTEVALHQVTDDFIAYTREIGPKLELEETTAFLVVAATLLD
LKAARLLPAGQVDDDEDLALLEVRDLLFARLLQYRAFKHVAEMFAELEASALRSYPRAVSLEDRFTQLLPEVMLGVDAER
FAQIAAVAFSPRPVPTVSVGHLHEVKVSVPEQARKLLAILEARGSGQWATFSELVADCEGSMEVVGRFLALLELYRSRAV
AFEQSEPLGVLQISWTGERPVGETLVEVRDEL

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 30173; Mature: 30173

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: PS00014 ER_TARGET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNATANGEAQPQTGFQVRLTNFEGPFDLLLQLIFAHRLDVTEVALHQVTDDFIAYTREIG
CCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
PKLELEETTAFLVVAATLLDLKAARLLPAGQVDDDEDLALLEVRDLLFARLLQYRAFKHV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AEMFAELEASALRSYPRAVSLEDRFTQLLPEVMLGVDAERFAQIAAVAFSPRPVPTVSVG
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEECC
HLHEVKVSVPEQARKLLAILEARGSGQWATFSELVADCEGSMEVVGRFLALLELYRSRAV
CEEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AFEQSEPLGVLQISWTGERPVGETLVEVRDEL
HCCCCCCCEEEEEEECCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MNATANGEAQPQTGFQVRLTNFEGPFDLLLQLIFAHRLDVTEVALHQVTDDFIAYTREIG
CCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
PKLELEETTAFLVVAATLLDLKAARLLPAGQVDDDEDLALLEVRDLLFARLLQYRAFKHV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AEMFAELEASALRSYPRAVSLEDRFTQLLPEVMLGVDAERFAQIAAVAFSPRPVPTVSVG
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEECC
HLHEVKVSVPEQARKLLAILEARGSGQWATFSELVADCEGSMEVVGRFLALLELYRSRAV
CEEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AFEQSEPLGVLQISWTGERPVGETLVEVRDEL
HCCCCCCCEEEEEEECCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA