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The map label for this gene is IS1601_B_3

Identifier: 41407385

GI number: 41407385

Start: 1375983

End: 1377206

Strand: Direct

Name: IS1601_B_3

Synonym: MAP1287

Alternate gene names: NA

Gene position: 1375983-1377206 (Clockwise)

Preceding gene: 41407383

Following gene: 41407387

Centisome position: 28.49

GC content: 66.26

Gene sequence:

>1224_bases
GTGATATTTGTCGGCGACGATTGGGCGGAGGATCATCACGACGTCCACCTGATGGATGAATCCGGGGCCCGGCTGGCCTC
GCGTCGGTTACCGGAGGGACTTGCCGGCATCGGCGAGTTCCATCAGCTTTTGGCCCGCCATGCCGAAGAGCCCGACCAGG
TCGTGATTGGAATCGAAACCGACCGTGGTTTGTGGGTCGAGGCGCTCACCGCGGCCGATTACCAGGTGTATGCGATCAAC
CCGATGGCGGCCGCCCGCTACCGCGACCGCCACCATGTGTCGGGGGCCAAATCCGATGCCGGGGACGCCAAGCTCTTGGC
GGATCTGGTGCGCACCGATCGCCACAATCACCGCCGCGTCGCCGGTGACTCCGCTGATACCGAGGCGGTCAAAGTGCTGG
CCCGGGCACATCAGAATCTGATCTGGACCCGCAATCGGCACACCAACGCGCTGCGCTCGGCGCTGCGCGAGTACTACCCA
GGCGCGCTGGAGGCGTTCGACGATCTGCACGACCGCGACGCTCTGGCGATCCTGGGCCGAGCGCCCACCCCCATGCAAGC
GGCGAACCTGAGTCTGTCGAAGATCCGGTCTGCACTCAAAGCCGCTGGGCGACAACGCAACCTCGACACCGTCGCCCAGG
ACATTCAAACCGCTTTACGCGCTGAGCAGCTCGCCGCCCCTGCCGCGGTCACCGCCGCGTTCGGCGCAACCACCCGCGCC
ACGGTCGGCATCATCGCTGAACTGAACCGCCAGATCACCGACCTTGAGGCCGAACTGGCAACACATTTTGAGACACACCC
GGACGCCGACATCTACCGCTCCCTGCCAGGACTTGGTGTCATCCTCGGCGCCCGGGTGCTCGGTGAGTTCGGGGACGACC
CGAACAGGTACACCACCGCCAAGTGTCGCAAAAACTACGCCGGAACGTCGCCGCTGACCGTCGCCTCCGGCCGCAAACGC
GCCGTGCTGGCCCGCCACGTCCGCAACCGCCGGCTCTACGACGCGATCGACCAATGGGCCTTCTGCGCCCTGAACACCAG
CCCCGGCGCCCGCCTGTTCTACGACCGGCGTCGCGCTGCCGGCGACCTCCACCACCAAGCGCTACGCGCCCTCGGTAACC
GCCTCGTAGGCATCCTCCACGGCTGCCTACGACACCGAACCCACTACGACGAACACAAAGCCTGGGCACACCGCCAAACC
AACCCCGACTCCCAGGCGGCTTGA

Upstream 100 bases:

>100_bases
AGCACTGATGGGGTGTCGTGCCGTTGAGCACTGATCCATTAGCTTGTCGCCGGGTGCCCTTGGGCTCGAACATGTTCGAT
GACCACCGAGGAGGCGCTAC

Downstream 100 bases:

>100_bases
CAACTTACGGACCTGGGATGTCTAGCCTGGCAGGCCGGGCGGCCTGAGTGCGGCAAATTCGTCGGTGACCCGCAGCGCCG
CGTCGGTGAACCGGTACAGG

Product: IS1601_B_3 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MIFVGDDWAEDHHDVHLMDESGARLASRRLPEGLAGIGEFHQLLARHAEEPDQVVIGIETDRGLWVEALTAADYQVYAIN
PMAAARYRDRHHVSGAKSDAGDAKLLADLVRTDRHNHRRVAGDSADTEAVKVLARAHQNLIWTRNRHTNALRSALREYYP
GALEAFDDLHDRDALAILGRAPTPMQAANLSLSKIRSALKAAGRQRNLDTVAQDIQTALRAEQLAAPAAVTAAFGATTRA
TVGIIAELNRQITDLEAELATHFETHPDADIYRSLPGLGVILGARVLGEFGDDPNRYTTAKCRKNYAGTSPLTVASGRKR
AVLARHVRNRRLYDAIDQWAFCALNTSPGARLFYDRRRAAGDLHHQALRALGNRLVGILHGCLRHRTHYDEHKAWAHRQT
NPDSQAA

Sequences:

>Translated_407_residues
MIFVGDDWAEDHHDVHLMDESGARLASRRLPEGLAGIGEFHQLLARHAEEPDQVVIGIETDRGLWVEALTAADYQVYAIN
PMAAARYRDRHHVSGAKSDAGDAKLLADLVRTDRHNHRRVAGDSADTEAVKVLARAHQNLIWTRNRHTNALRSALREYYP
GALEAFDDLHDRDALAILGRAPTPMQAANLSLSKIRSALKAAGRQRNLDTVAQDIQTALRAEQLAAPAAVTAAFGATTRA
TVGIIAELNRQITDLEAELATHFETHPDADIYRSLPGLGVILGARVLGEFGDDPNRYTTAKCRKNYAGTSPLTVASGRKR
AVLARHVRNRRLYDAIDQWAFCALNTSPGARLFYDRRRAAGDLHHQALRALGNRLVGILHGCLRHRTHYDEHKAWAHRQT
NPDSQAA
>Mature_407_residues
MIFVGDDWAEDHHDVHLMDESGARLASRRLPEGLAGIGEFHQLLARHAEEPDQVVIGIETDRGLWVEALTAADYQVYAIN
PMAAARYRDRHHVSGAKSDAGDAKLLADLVRTDRHNHRRVAGDSADTEAVKVLARAHQNLIWTRNRHTNALRSALREYYP
GALEAFDDLHDRDALAILGRAPTPMQAANLSLSKIRSALKAAGRQRNLDTVAQDIQTALRAEQLAAPAAVTAAFGATTRA
TVGIIAELNRQITDLEAELATHFETHPDADIYRSLPGLGVILGARVLGEFGDDPNRYTTAKCRKNYAGTSPLTVASGRKR
AVLARHVRNRRLYDAIDQWAFCALNTSPGARLFYDRRRAAGDLHHQALRALGNRLVGILHGCLRHRTHYDEHKAWAHRQT
NPDSQAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 44966; Mature: 44966

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFVGDDWAEDHHDVHLMDESGARLASRRLPEGLAGIGEFHQLLARHAEEPDQVVIGIET
CEEECCCCCCCCCCEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
DRGLWVEALTAADYQVYAINPMAAARYRDRHHVSGAKSDAGDAKLLADLVRTDRHNHRRV
CCCCEEEEEECCCEEEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCC
AGDSADTEAVKVLARAHQNLIWTRNRHTNALRSALREYYPGALEAFDDLHDRDALAILGR
CCCCCHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHEEECC
APTPMQAANLSLSKIRSALKAAGRQRNLDTVAQDIQTALRAEQLAAPAAVTAAFGATTRA
CCCCHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHH
TVGIIAELNRQITDLEAELATHFETHPDADIYRSLPGLGVILGARVLGEFGDDPNRYTTA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHH
KCRKNYAGTSPLTVASGRKRAVLARHVRNRRLYDAIDQWAFCALNTSPGARLFYDRRRAA
HHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHH
GDLHHQALRALGNRLVGILHGCLRHRTHYDEHKAWAHRQTNPDSQAA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MIFVGDDWAEDHHDVHLMDESGARLASRRLPEGLAGIGEFHQLLARHAEEPDQVVIGIET
CEEECCCCCCCCCCEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
DRGLWVEALTAADYQVYAINPMAAARYRDRHHVSGAKSDAGDAKLLADLVRTDRHNHRRV
CCCCEEEEEECCCEEEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCC
AGDSADTEAVKVLARAHQNLIWTRNRHTNALRSALREYYPGALEAFDDLHDRDALAILGR
CCCCCHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHEEECC
APTPMQAANLSLSKIRSALKAAGRQRNLDTVAQDIQTALRAEQLAAPAAVTAAFGATTRA
CCCCHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHH
TVGIIAELNRQITDLEAELATHFETHPDADIYRSLPGLGVILGARVLGEFGDDPNRYTTA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHH
KCRKNYAGTSPLTVASGRKRAVLARHVRNRRLYDAIDQWAFCALNTSPGARLFYDRRRAA
HHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHH
GDLHHQALRALGNRLVGILHGCLRHRTHYDEHKAWAHRQTNPDSQAA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2575701; 12000953 [H]