Click here to switch to the map view.

The map label for this gene is 41407354

Identifier: 41407354

GI number: 41407354

Start: 1335768

End: 1336199

Strand: Direct

Name: 41407354

Synonym: MAP1256

Alternate gene names: NA

Gene position: 1335768-1336199 (Clockwise)

Preceding gene: 41407353

Following gene: 41407355

Centisome position: 27.66

GC content: 71.99

Gene sequence:

>432_bases
ATGGCCGCCGTGGAGATGACCGCCGAGGTGCCGATGAGCCCGCAACAGATGTGGGACCGGGTGTCCGACCTGTCGGAGCT
GGGCGACTGGCTGGTGCTGCACGAGGCCTGGCGCGGCGAACTGCCCGACGAGCTGGGCGAGGGCACCCAGGTCGTCGGCG
TGGCCCGCGCCAAAGGCTTTCGCAACCGGGTGACCTGGACGGTGACCACCTGGGAACCGCCGCACCGGGTGGCGATGACG
GGCTCGGGCAAGGGCGGGACCAAGTACGCCGTCTCGCTGACCGTGCGGCCCACCGGCGACGGCTCCACCCTCGGCCTGCG
GCTCGAGCTGGGCGGTCGGGCGCTGTTCGGGCCGGTCGGATCGGCCGCCGCGCGCGCCGTCAAGGGCGACGTGCAGAGGT
CGCTGCGTAACTTCGTCGAGCTCTACGGATAA

Upstream 100 bases:

>100_bases
CCCAAGCGCTGAGTGTCGCCGAGCGCCACGCCAGCGTGGTGTTCGGTGCCGAGCGTCACGCCAGCGTGGGGCGGACGCGG
GGGGAGCGAGGAGGAAACTC

Downstream 100 bases:

>100_bases
AACCCAACACACGGACCCGACACGCCCGAAACCCGTCGGTCCTCGGTCATAGACTGGCGTCCCTATGAACCACTCGTCCT
TCGTGCACCTGCACAACCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MAAVEMTAEVPMSPQQMWDRVSDLSELGDWLVLHEAWRGELPDELGEGTQVVGVARAKGFRNRVTWTVTTWEPPHRVAMT
GSGKGGTKYAVSLTVRPTGDGSTLGLRLELGGRALFGPVGSAAARAVKGDVQRSLRNFVELYG

Sequences:

>Translated_143_residues
MAAVEMTAEVPMSPQQMWDRVSDLSELGDWLVLHEAWRGELPDELGEGTQVVGVARAKGFRNRVTWTVTTWEPPHRVAMT
GSGKGGTKYAVSLTVRPTGDGSTLGLRLELGGRALFGPVGSAAARAVKGDVQRSLRNFVELYG
>Mature_142_residues
AAVEMTAEVPMSPQQMWDRVSDLSELGDWLVLHEAWRGELPDELGEGTQVVGVARAKGFRNRVTWTVTTWEPPHRVAMTG
SGKGGTKYAVSLTVRPTGDGSTLGLRLELGGRALFGPVGSAAARAVKGDVQRSLRNFVELYG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019587 [H]

Pfam domain/function: PF10604 Polyketide_cyc2 [H]

EC number: NA

Molecular weight: Translated: 15424; Mature: 15293

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAVEMTAEVPMSPQQMWDRVSDLSELGDWLVLHEAWRGELPDELGEGTQVVGVARAKGF
CCCEEEEECCCCCHHHHHHHHHHHHHHHHEEEEHHHHCCCCCHHHCCCCEEEEEHHCCCC
RNRVTWTVTTWEPPHRVAMTGSGKGGTKYAVSLTVRPTGDGSTLGLRLELGGRALFGPVG
CCCEEEEEEECCCCCEEEEECCCCCCCEEEEEEEEEECCCCCEEEEEEEECCEEEECCCC
SAAARAVKGDVQRSLRNFVELYG
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AAVEMTAEVPMSPQQMWDRVSDLSELGDWLVLHEAWRGELPDELGEGTQVVGVARAKGF
CCEEEEECCCCCHHHHHHHHHHHHHHHHEEEEHHHHCCCCCHHHCCCCEEEEEHHCCCC
RNRVTWTVTTWEPPHRVAMTGSGKGGTKYAVSLTVRPTGDGSTLGLRLELGGRALFGPVG
CCCEEEEEEECCCCCEEEEECCCCCCCEEEEEEEEEECCCCCEEEEEEEECCEEEECCCC
SAAARAVKGDVQRSLRNFVELYG
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]