The gene/protein map for NC_002944 is currently unavailable.
Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is yqjQ [H]

Identifier: 41407353

GI number: 41407353

Start: 1334876

End: 1335679

Strand: Direct

Name: yqjQ [H]

Synonym: MAP1255

Alternate gene names: 41407353

Gene position: 1334876-1335679 (Clockwise)

Preceding gene: 41407352

Following gene: 41407354

Centisome position: 27.64

GC content: 71.77

Gene sequence:

>804_bases
ATGAGCCTTCCCAAACCCGACATCGCGACCACCGTCGTCATCACCGGCGCCTCGTCCGGCATCGGCGCCGAACTGGCGCG
CGGCCTGGCCCGCCGTGGCTTCCCGCTGCTGCTGGTCGCCCGGCGCCGTGAGCGGCTCGACGATCTCGCCAACGAGGTGG
GCGGGCAGTACTCGGTCGGCGTCGAGGTGCTGCCGCTGGACCTCGGCGACTCGAAGGCCCGTGCCCGGTTGGCCGGCCGG
CTGCGCAGCGAATCGATCGCCGGGTTGTGCAACAGCGCGGGCTTCGGCACCAGCGGGGTCTTCCACGAGCTGCCGATGGA
GCGCGAGAGCGAAGAGGTCACCCTCAACGCGCTGGCGCTGATGGAGCTGACGCACGCGACGCTGCCCGGCATGGTGTCGC
GGGGGGCGGGCGCGGTGCTGAACATCGCGTCGATCGCGGGTTTTCAGCCGGTTCCCTACATGGCCGTCTACTCGGCGACC
AAGGCGTTCGTGCAGACGTTCTCCGAGGCCGTGCACGAGGAGCTGCACGGCAGCGGGGTGTCGGTCACCTGTCTGTGTCC
GGGCCCGGTGCCCACCGAGTGGGCCGAGATCGCCAACGCCGAGCGGTTCAGCATCCCGATCGCGCAGGTTTCGCCGCGGG
ACGTGGCCGAGGCGGCGATCGGCGGCATGCTCACCGGCCGTCGCACCGTGGTGCCGGGCGTGGTGCCCAAGGTGGTCAGC
ACAGGCGGCCGTTTCGCCCCGCGCAGCCTGCTGCTGCCGGGCATCCGGATCGGCAACCGGTTCCGCGGCGGGCCCAAGCG
CTGA

Upstream 100 bases:

>100_bases
AGCGCCGCCAAGGGCGATGAATCCGCAACCGACGCAACCGAATTCGACGCGCGCAGCGAAACGTTCGTGCGGGCGACCCG
AGGGATACATTGGTGAGAGG

Downstream 100 bases:

>100_bases
GTGTCGCCGAGCGCCACGCCAGCGTGGTGTTCGGTGCCGAGCGTCACGCCAGCGTGGGGCGGACGCGGGGGGAGCGAGGA
GGAAACTCATGGCCGCCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MSLPKPDIATTVVITGASSGIGAELARGLARRGFPLLLVARRRERLDDLANEVGGQYSVGVEVLPLDLGDSKARARLAGR
LRSESIAGLCNSAGFGTSGVFHELPMERESEEVTLNALALMELTHATLPGMVSRGAGAVLNIASIAGFQPVPYMAVYSAT
KAFVQTFSEAVHEELHGSGVSVTCLCPGPVPTEWAEIANAERFSIPIAQVSPRDVAEAAIGGMLTGRRTVVPGVVPKVVS
TGGRFAPRSLLLPGIRIGNRFRGGPKR

Sequences:

>Translated_267_residues
MSLPKPDIATTVVITGASSGIGAELARGLARRGFPLLLVARRRERLDDLANEVGGQYSVGVEVLPLDLGDSKARARLAGR
LRSESIAGLCNSAGFGTSGVFHELPMERESEEVTLNALALMELTHATLPGMVSRGAGAVLNIASIAGFQPVPYMAVYSAT
KAFVQTFSEAVHEELHGSGVSVTCLCPGPVPTEWAEIANAERFSIPIAQVSPRDVAEAAIGGMLTGRRTVVPGVVPKVVS
TGGRFAPRSLLLPGIRIGNRFRGGPKR
>Mature_266_residues
SLPKPDIATTVVITGASSGIGAELARGLARRGFPLLLVARRRERLDDLANEVGGQYSVGVEVLPLDLGDSKARARLAGRL
RSESIAGLCNSAGFGTSGVFHELPMERESEEVTLNALALMELTHATLPGMVSRGAGAVLNIASIAGFQPVPYMAVYSATK
AFVQTFSEAVHEELHGSGVSVTCLCPGPVPTEWAEIANAERFSIPIAQVSPRDVAEAAIGGMLTGRRTVVPGVVPKVVST
GGRFAPRSLLLPGIRIGNRFRGGPKR

Specific function: Unknown

COG id: COG0300

COG function: function code R; Short-chain dehydrogenases of various substrate specificities

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI7705855, Length=196, Percent_Identity=32.6530612244898, Blast_Score=120, Evalue=1e-27,
Organism=Homo sapiens, GI226371731, Length=254, Percent_Identity=28.740157480315, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI4557649, Length=217, Percent_Identity=29.4930875576037, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI7706318, Length=196, Percent_Identity=33.1632653061224, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI20149619, Length=234, Percent_Identity=27.7777777777778, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI7657478, Length=202, Percent_Identity=31.1881188118812, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI142976729, Length=248, Percent_Identity=28.6290322580645, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI210032110, Length=234, Percent_Identity=25.6410256410256, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI109715829, Length=224, Percent_Identity=29.4642857142857, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI44680136, Length=183, Percent_Identity=27.3224043715847, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI44680133, Length=183, Percent_Identity=27.3224043715847, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI17738292, Length=183, Percent_Identity=27.3224043715847, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI40807363, Length=201, Percent_Identity=30.8457711442786, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI223718074, Length=193, Percent_Identity=30.5699481865285, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI157739938, Length=182, Percent_Identity=26.9230769230769, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI32483357, Length=200, Percent_Identity=25.5, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI40254992, Length=229, Percent_Identity=25.764192139738, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI32455239, Length=190, Percent_Identity=30.5263157894737, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI5031765, Length=190, Percent_Identity=30.5263157894737, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI33667109, Length=210, Percent_Identity=26.1904761904762, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI150247226, Length=215, Percent_Identity=29.3023255813954, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI1787820, Length=217, Percent_Identity=33.6405529953917, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1786701, Length=203, Percent_Identity=29.064039408867, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI87082100, Length=257, Percent_Identity=29.1828793774319, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1788459, Length=191, Percent_Identity=28.2722513089005, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI25152911, Length=211, Percent_Identity=32.7014218009479, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI212646214, Length=205, Percent_Identity=29.2682926829268, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17559552, Length=210, Percent_Identity=28.5714285714286, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17557668, Length=211, Percent_Identity=28.436018957346, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17560176, Length=192, Percent_Identity=29.6875, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI71994604, Length=186, Percent_Identity=32.258064516129, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17532725, Length=221, Percent_Identity=25.3393665158371, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI193203117, Length=270, Percent_Identity=28.1481481481481, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI193203115, Length=270, Percent_Identity=28.1481481481481, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI71994600, Length=186, Percent_Identity=29.0322580645161, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71997402, Length=182, Percent_Identity=31.3186813186813, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17508895, Length=196, Percent_Identity=29.0816326530612, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115534694, Length=232, Percent_Identity=24.1379310344828, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6319635, Length=204, Percent_Identity=30.8823529411765, Blast_Score=93, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6323882, Length=235, Percent_Identity=29.7872340425532, Blast_Score=83, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6322067, Length=190, Percent_Identity=28.4210526315789, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24640442, Length=198, Percent_Identity=33.3333333333333, Blast_Score=111, Evalue=4e-25,
Organism=Drosophila melanogaster, GI24584748, Length=201, Percent_Identity=32.8358208955224, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI161076933, Length=201, Percent_Identity=32.8358208955224, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24584744, Length=188, Percent_Identity=34.0425531914894, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI28574402, Length=188, Percent_Identity=34.0425531914894, Blast_Score=105, Evalue=2e-23,
Organism=Drosophila melanogaster, GI21358495, Length=189, Percent_Identity=32.2751322751323, Blast_Score=91, Evalue=8e-19,
Organism=Drosophila melanogaster, GI24584752, Length=185, Percent_Identity=29.1891891891892, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24580925, Length=196, Percent_Identity=32.1428571428571, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24648944, Length=222, Percent_Identity=29.2792792792793, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI23397609, Length=185, Percent_Identity=33.5135135135135, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI28571526, Length=184, Percent_Identity=28.804347826087, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI21357041, Length=188, Percent_Identity=29.7872340425532, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24644339, Length=188, Percent_Identity=31.9148936170213, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24639444, Length=186, Percent_Identity=29.5698924731183, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI116007236, Length=193, Percent_Identity=27.979274611399, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24643142, Length=235, Percent_Identity=27.2340425531915, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21356301, Length=257, Percent_Identity=27.2373540856031, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27977; Mature: 27845

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MSLPKPDIATTVVITGASSGIGAELARGLARRGFPLLLVARRRERLDDLANEVGGQYSVG
CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCEECC
VEVLPLDLGDSKARARLAGRLRSESIAGLCNSAGFGTSGVFHELPMERESEEVTLNALAL
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHHHHHHH
MELTHATLPGMVSRGAGAVLNIASIAGFQPVPYMAVYSATKAFVQTFSEAVHEELHGSGV
HHHHHHHCCHHHHCCCCCEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SVTCLCPGPVPTEWAEIANAERFSIPIAQVSPRDVAEAAIGGMLTGRRTVVPGVVPKVVS
EEEEEECCCCCHHHHHHCCCCHHCCCHHCCCHHHHHHHHHHHHHCCCCEECCCHHHHHHH
TGGRFAPRSLLLPGIRIGNRFRGGPKR
CCCCCCCHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLPKPDIATTVVITGASSGIGAELARGLARRGFPLLLVARRRERLDDLANEVGGQYSVG
CCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCEECC
VEVLPLDLGDSKARARLAGRLRSESIAGLCNSAGFGTSGVFHELPMERESEEVTLNALAL
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHHHHHHH
MELTHATLPGMVSRGAGAVLNIASIAGFQPVPYMAVYSATKAFVQTFSEAVHEELHGSGV
HHHHHHHCCHHHHCCCCCEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SVTCLCPGPVPTEWAEIANAERFSIPIAQVSPRDVAEAAIGGMLTGRRTVVPGVVPKVVS
EEEEEECCCCCHHHHHHCCCCHHCCCHHCCCHHHHHHHHHHHHHCCCCEECCCHHHHHHH
TGGRFAPRSLLLPGIRIGNRFRGGPKR
CCCCCCCHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]