| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41407333
Identifier: 41407333
GI number: 41407333
Start: 1297579
End: 1298913
Strand: Direct
Name: 41407333
Synonym: MAP1235
Alternate gene names: NA
Gene position: 1297579-1298913 (Clockwise)
Preceding gene: 41407332
Following gene: 41407340
Centisome position: 26.87
GC content: 55.88
Gene sequence:
>1335_bases GTGACTGAAGCCAATGAGTGCAACTCGGCGTCGCGAAAGGTTTCAGTCGCGGTTGAGCAAGACACCGCAAGACTACTGGA GTGCGTGCACAAGCGCCTCCAGCTCGCGGCTGAAAGCGGATGCAAAGGGATTCGAAGCTTGAGCAACATGCGAAGGGGAG AACGGCCTATGAGCCTGGGACAGGTTTTCGACCCGCGCGCGAATGCACTTAATGCGTGGCGCTTGGTGTTGGCGAGCGGG GTGATCCTATGGCATTCGTTTCCGCTCACTGGACGTATGCCGTGGGCGCCGTTCGTCCAGTTGCTTGGCCTTGGATGCGT TGATGGTTTCTTTGCGGTCTCCGGCTATCTCATCGTCTCGAGCTGGCTTCGCAACCCGCATCCCGCCCAATACTTCACCG CTCGATGTCTTCGTATTCTCCCGGGTCTGTGGATCTGTCTCATCTTGACGGCGTTTGTCATCGCTCCGATAGGTGTGGGC GCCCAGGGCGGTTCGGCCGCGAAACTACTGATGTCCGGCGCTCCGATCGAGTATGTGCTAAAAGACAGTGCGGTTTGGAT GTTTAAGTTCGATATCGGTGGCACACCTCGCGATATTCCAGTTGCGGGTATTTGGAACGGTTCTCTGTGGACATTGGGTT GGGAGGTGCTTTGCTATATCGGCGTAGCAGTATTTGGTATGCTCGGACTTCTTAGTCGCCGTTGGTTCGTTCCAGGGATA TTGATCCTGGCGCTGTCGTGGTCGGTGTTCTTGCCGGCATGGGGCGGAATACACGCGATCGCCTCCAATGCTGCGCGATT CGCTGTGATGTTTTCGGCCGGAGCGTTGCTGTATCAATTCCGTAACGTGATTCCGGCTCGGTGGTCCTTCGTTGCCGTCG GCCTCATTATCGTTGTGGTTTCCTCTGCCGTGCTGCCGAACTACCGGTTGGTGGCGGCCCTTCCGATGGCGTACCTAATC ATCGCTTCGGGTTCGCTCATCCACAATCAAAGGATGAGGTTCCGCACCGATCTATCCTATGGAGTATATATTTATGCGTT TCCAATTCAGCAAGTGCTGGTCCTGTGTGGATTCGCCGAGATAAATCCAATCGCTTTCTGCGCGATTTCTGTCGCAGCTA TTTTGCCGCTCGCCGCGCTCAGTTGGTTCTTGGTCGAGAAACCTGCGTTGTCCTGGAAGAGTCGTCTCCGGCGGAAAAAC AGTTCAATTGCGCTAGCCAATATGGAAGATGGTGGATCAGTCGGCCGCTCAAATGACATTCCCGGAAGGCGGGCCCGCTT TATTGGCGAGAAAGCCGAAGATCCTCCCGCGCCGAGCCCAAGACCGGCTTTGTAA
Upstream 100 bases:
>100_bases GCATATCGCATCACTGTTCTCGTGCCAGTGCTTGGAAAGCGTCGAGCACTCTGGTTCGCGTTCTTGACGTTCGCGCCCGC CCCTAGAGGTAGCGTGTCAC
Downstream 100 bases:
>100_bases GGCGTTGTGTTCCGGCTGAGAGCCGGTCGGTGGTCAAGCGATTCACCACTCAACGCGGGACCCCATCCACTACTGTTGCC AGCCAAGACGGTTGCGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Acyltransferase; Acyltransferase Family Protein; O-Antigen Acetylase; Sugar Acetylase; Acetyltransferase Protein; O-Acetyl Transferase; Nodulation Protein X; O-Acyl Transferase; Acyltransferase Putative; Glycosyl Transferase Family Protein; Acetyltransferase AtfA; O-Acetyl-Transferase
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MTEANECNSASRKVSVAVEQDTARLLECVHKRLQLAAESGCKGIRSLSNMRRGERPMSLGQVFDPRANALNAWRLVLASG VILWHSFPLTGRMPWAPFVQLLGLGCVDGFFAVSGYLIVSSWLRNPHPAQYFTARCLRILPGLWICLILTAFVIAPIGVG AQGGSAAKLLMSGAPIEYVLKDSAVWMFKFDIGGTPRDIPVAGIWNGSLWTLGWEVLCYIGVAVFGMLGLLSRRWFVPGI LILALSWSVFLPAWGGIHAIASNAARFAVMFSAGALLYQFRNVIPARWSFVAVGLIIVVVSSAVLPNYRLVAALPMAYLI IASGSLIHNQRMRFRTDLSYGVYIYAFPIQQVLVLCGFAEINPIAFCAISVAAILPLAALSWFLVEKPALSWKSRLRRKN SSIALANMEDGGSVGRSNDIPGRRARFIGEKAEDPPAPSPRPAL
Sequences:
>Translated_444_residues MTEANECNSASRKVSVAVEQDTARLLECVHKRLQLAAESGCKGIRSLSNMRRGERPMSLGQVFDPRANALNAWRLVLASG VILWHSFPLTGRMPWAPFVQLLGLGCVDGFFAVSGYLIVSSWLRNPHPAQYFTARCLRILPGLWICLILTAFVIAPIGVG AQGGSAAKLLMSGAPIEYVLKDSAVWMFKFDIGGTPRDIPVAGIWNGSLWTLGWEVLCYIGVAVFGMLGLLSRRWFVPGI LILALSWSVFLPAWGGIHAIASNAARFAVMFSAGALLYQFRNVIPARWSFVAVGLIIVVVSSAVLPNYRLVAALPMAYLI IASGSLIHNQRMRFRTDLSYGVYIYAFPIQQVLVLCGFAEINPIAFCAISVAAILPLAALSWFLVEKPALSWKSRLRRKN SSIALANMEDGGSVGRSNDIPGRRARFIGEKAEDPPAPSPRPAL >Mature_443_residues TEANECNSASRKVSVAVEQDTARLLECVHKRLQLAAESGCKGIRSLSNMRRGERPMSLGQVFDPRANALNAWRLVLASGV ILWHSFPLTGRMPWAPFVQLLGLGCVDGFFAVSGYLIVSSWLRNPHPAQYFTARCLRILPGLWICLILTAFVIAPIGVGA QGGSAAKLLMSGAPIEYVLKDSAVWMFKFDIGGTPRDIPVAGIWNGSLWTLGWEVLCYIGVAVFGMLGLLSRRWFVPGIL ILALSWSVFLPAWGGIHAIASNAARFAVMFSAGALLYQFRNVIPARWSFVAVGLIIVVVSSAVLPNYRLVAALPMAYLII ASGSLIHNQRMRFRTDLSYGVYIYAFPIQQVLVLCGFAEINPIAFCAISVAAILPLAALSWFLVEKPALSWKSRLRRKNS SIALANMEDGGSVGRSNDIPGRRARFIGEKAEDPPAPSPRPAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48387; Mature: 48255
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEANECNSASRKVSVAVEQDTARLLECVHKRLQLAAESGCKGIRSLSNMRRGERPMSLG CCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH QVFDPRANALNAWRLVLASGVILWHSFPLTGRMPWAPFVQLLGLGCVDGFFAVSGYLIVS HHCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SWLRNPHPAQYFTARCLRILPGLWICLILTAFVIAPIGVGAQGGSAAKLLMSGAPIEYVL HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEEE KDSAVWMFKFDIGGTPRDIPVAGIWNGSLWTLGWEVLCYIGVAVFGMLGLLSRRWFVPGI ECCEEEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILALSWSVFLPAWGGIHAIASNAARFAVMFSAGALLYQFRNVIPARWSFVAVGLIIVVV HHHHHHHHHHHCCCCCHHHHHCCHHHEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH SSAVLPNYRLVAALPMAYLIIASGSLIHNQRMRFRTDLSYGVYIYAFPIQQVLVLCGFAE HHHHCCCCHHHHHHHHHHHHHHCCCHHHHCHHHHEECCCCCEEEEEECHHHHHHHHCCHH INPIAFCAISVAAILPLAALSWFLVEKPALSWKSRLRRKNSSIALANMEDGGSVGRSNDI CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC PGRRARFIGEKAEDPPAPSPRPAL CCHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TEANECNSASRKVSVAVEQDTARLLECVHKRLQLAAESGCKGIRSLSNMRRGERPMSLG CCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH QVFDPRANALNAWRLVLASGVILWHSFPLTGRMPWAPFVQLLGLGCVDGFFAVSGYLIVS HHCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SWLRNPHPAQYFTARCLRILPGLWICLILTAFVIAPIGVGAQGGSAAKLLMSGAPIEYVL HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEEE KDSAVWMFKFDIGGTPRDIPVAGIWNGSLWTLGWEVLCYIGVAVFGMLGLLSRRWFVPGI ECCEEEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILALSWSVFLPAWGGIHAIASNAARFAVMFSAGALLYQFRNVIPARWSFVAVGLIIVVV HHHHHHHHHHHCCCCCHHHHHCCHHHEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH SSAVLPNYRLVAALPMAYLIIASGSLIHNQRMRFRTDLSYGVYIYAFPIQQVLVLCGFAE HHHHCCCCHHHHHHHHHHHHHHCCCHHHHCHHHHEECCCCCEEEEEECHHHHHHHHCCHH INPIAFCAISVAAILPLAALSWFLVEKPALSWKSRLRRKNSSIALANMEDGGSVGRSNDI CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC PGRRARFIGEKAEDPPAPSPRPAL CCHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA