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The map label for this gene is yibD [C]

Identifier: 41407332

GI number: 41407332

Start: 1296587

End: 1297387

Strand: Direct

Name: yibD [C]

Synonym: MAP1234

Alternate gene names: 41407332

Gene position: 1296587-1297387 (Clockwise)

Preceding gene: 41407331

Following gene: 41407333

Centisome position: 26.85

GC content: 57.43

Gene sequence:

>801_bases
ATGACTGCGCCAGTGTTCTCGATAATTATCCCTACCTTCAATGCAGCGGTGACGCTGCAAGCCTGCCTCGGAAGCATCGT
CGGGCAGACCTACCGGGAAGTGGAAGTGGTCCTTGTCGACGGCGGTTCGACCGATCGGACCCTCGACATCGCGAACAGTT
TCCGCCCGGAACTCGGCTCGCGACTGGTCGTTCACAGCGGGCCCGATGATGGCCCCTACGACGCCATGAACCGCGGCGTC
GGCGTAGCCACAGGCGAATGGGTACTTTTTTTAGGCGCCGACGACACCCTCTACGAACCAACCACGTTGGCCCAGGTAGC
CGCTTTTCTCGGCGACCATGCGGCAAGCCATCTTGTCTATGGCGATGTTGTGATGCGTTCGACGAAAAGCCGGCATGCCG
GACCTTTCGACCTCGACCGCCTCCTATTTGAGACGAATTTGTGCCACCAATCGATCTTTTACCGCCGTGAGCTTTTCGAC
GGCATCGGCCCTTACAACCTGCGCTACCGAGTCTGGGCGGACTGGGACTTCAATATTCGCTGCTTCTCCAACCCGGCGCT
GATTACCCGCTACATGGACGTCGTGATTTCCGAATACAACGACATGACCGGCTTCAGCATGAGGCAGGGGACTGATAAAG
AGTTCAGAAAACGGCTGCCAATGTACTTCTGGGTTGCAGGGTGGGAGACTTGCAGGCGCATGCTGGCGTTTTTGAAAGAC
AAGGAGAATCGCCGTCTGGCCTTGCGTACGCGGTTGATAAGGGTTAAGGCCGTCTCCAAAGAACGAAGCGCAGAACCGTA
G

Upstream 100 bases:

>100_bases
CTGGTGAGCCGGCCTCCCGGGCACCTAATCGACTATCTAAATTGAGGCGGCCGCGACGTGCGGCACGAACAGGTGGCCGG
CTGCTAGCGTTACACACGTC

Downstream 100 bases:

>100_bases
TCGCGGATCCACATTGGACTTCTTTAACGCGTTTGCGTCCTGATCCACCTTTCAACCCCGTTCCGCGTGACGCGGCGCGC
AGAGAGTGGTCGCATATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MTAPVFSIIIPTFNAAVTLQACLGSIVGQTYREVEVVLVDGGSTDRTLDIANSFRPELGSRLVVHSGPDDGPYDAMNRGV
GVATGEWVLFLGADDTLYEPTTLAQVAAFLGDHAASHLVYGDVVMRSTKSRHAGPFDLDRLLFETNLCHQSIFYRRELFD
GIGPYNLRYRVWADWDFNIRCFSNPALITRYMDVVISEYNDMTGFSMRQGTDKEFRKRLPMYFWVAGWETCRRMLAFLKD
KENRRLALRTRLIRVKAVSKERSAEP

Sequences:

>Translated_266_residues
MTAPVFSIIIPTFNAAVTLQACLGSIVGQTYREVEVVLVDGGSTDRTLDIANSFRPELGSRLVVHSGPDDGPYDAMNRGV
GVATGEWVLFLGADDTLYEPTTLAQVAAFLGDHAASHLVYGDVVMRSTKSRHAGPFDLDRLLFETNLCHQSIFYRRELFD
GIGPYNLRYRVWADWDFNIRCFSNPALITRYMDVVISEYNDMTGFSMRQGTDKEFRKRLPMYFWVAGWETCRRMLAFLKD
KENRRLALRTRLIRVKAVSKERSAEP
>Mature_265_residues
TAPVFSIIIPTFNAAVTLQACLGSIVGQTYREVEVVLVDGGSTDRTLDIANSFRPELGSRLVVHSGPDDGPYDAMNRGVG
VATGEWVLFLGADDTLYEPTTLAQVAAFLGDHAASHLVYGDVVMRSTKSRHAGPFDLDRLLFETNLCHQSIFYRRELFDG
IGPYNLRYRVWADWDFNIRCFSNPALITRYMDVVISEYNDMTGFSMRQGTDKEFRKRLPMYFWVAGWETCRRMLAFLKDK
ENRRLALRTRLIRVKAVSKERSAEP

Specific function: Involved in glycosylation steps downstream of mono-O- methyl-glycosyl-p-hydroxybenzoic acid derivative (p-HBAD I) and 2- O-methyl-rhamnosyl-phenolphthiocerol dimycocerosate (mycoside B) during the p-hydroxybenzoic acid derivatives (p-HBAD) and glycosylate

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=96, Percent_Identity=36.4583333333333, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 30196; Mature: 30065

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPVFSIIIPTFNAAVTLQACLGSIVGQTYREVEVVLVDGGSTDRTLDIANSFRPELGS
CCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEHHHHCCHHHCC
RLVVHSGPDDGPYDAMNRGVGVATGEWVLFLGADDTLYEPTTLAQVAAFLGDHAASHLVY
EEEEECCCCCCCHHHHHCCCCEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
GDVVMRSTKSRHAGPFDLDRLLFETNLCHQSIFYRRELFDGIGPYNLRYRVWADWDFNIR
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEE
CFSNPALITRYMDVVISEYNDMTGFSMRQGTDKEFRKRLPMYFWVAGWETCRRMLAFLKD
EECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEEECCHHHHHHHHHHHHC
KENRRLALRTRLIRVKAVSKERSAEP
CCCCEEHHHHHHHHHEEHHHHCCCCC
>Mature Secondary Structure 
TAPVFSIIIPTFNAAVTLQACLGSIVGQTYREVEVVLVDGGSTDRTLDIANSFRPELGS
CCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEHHHHCCHHHCC
RLVVHSGPDDGPYDAMNRGVGVATGEWVLFLGADDTLYEPTTLAQVAAFLGDHAASHLVY
EEEEECCCCCCCHHHHHCCCCEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
GDVVMRSTKSRHAGPFDLDRLLFETNLCHQSIFYRRELFDGIGPYNLRYRVWADWDFNIR
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEE
CFSNPALITRYMDVVISEYNDMTGFSMRQGTDKEFRKRLPMYFWVAGWETCRRMLAFLKD
EECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEEECCHHHHHHHHHHHHC
KENRRLALRTRLIRVKAVSKERSAEP
CCCCEEHHHHHHHHHEEHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]