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The map label for this gene is ybbK [C]

Identifier: 41407312

GI number: 41407312

Start: 1274506

End: 1275639

Strand: Direct

Name: ybbK [C]

Synonym: MAP1214

Alternate gene names: 41407312

Gene position: 1274506-1275639 (Clockwise)

Preceding gene: 41407311

Following gene: 41407313

Centisome position: 26.39

GC content: 70.02

Gene sequence:

>1134_bases
ATGCAAGGTGCGGTTGCTGGTTTGGTGCTGCTGGCCGTTCTGGTGATCTTCGCCATCGTGGTGGTGGCCAAGTCGGTCGC
GCTGATACCTCAGGCGGAGGCCGCGGTGATCGAGCGCCTGGGTCGGTACAGCCGTACGGTCAGCGGGCAGCTGACGCTGC
TGGTGCCGTTCATCGACCGGATCCGGGCCCGGGTGGATCTGCGGGAGCGGGTGGTGTCGTTCCCGCCCCAGCCGGTGATC
ACCGAGGACAACCTGACGCTGAACATCGACACCGTCGTCTACTTCCAGGTCACCGTTCCCCAGGCGGCCGTCTACGAGAT
CAGCAACTACATCGTCGGCGTCGAACAGCTCACCACCACCACGCTGCGCAACGTGGTCGGCGGCATGACGCTGGAGCAGA
CGCTGACCTCCCGCGACCAGATCAACGGGCAGCTGCGCGGCGTGCTGGACGAGGCCACCGGCCGCTGGGGCCTGCGGGTG
GCGCGGGTGGAGTTGCGCAGCATCGACCCGCCGCCGTCGATCCAGGCGTCGATGGAAAAGCAGATGAAGGCCGACCGCGA
GAAGCGGGCGATGATCCTGACCGCCGAGGGCATGCGCGAGTCGGCGATCAAGGAGGCCGAGGGCCAGAAGCAGGCGCAGA
TCCTGGCCGCCGAGGGCGCCAAGCAGGCCGCGATCCTGGCGGCCGAGGCCGACCGGCAGTCCCGGATGCTGCGCGCCCAG
GGGGAGCGGGCCGCGGCCTACCTGCAGGCGCAGGGCCAGGCCAAGGCCATCGAGAAGACGTTCGCCGCGATCAAGGCCGG
CCGCCCGACCCCGGAGATGCTGGCCTACCAGTACCTGCAGACGCTGCCGGAGATGGCGCGCGGCGACGCCAACAAGGTGT
GGGTGGTGCCCAGCGACTTCAGCGCGGCGCTGCAGGGATTCACCAAGCTGCTGGGCACGCCGGGCCAGGACGGGGTGTTC
CGGTTCCAGCCGTCGCCGGTCGAGGACGTGCCCAAGCACAGCGCCGACGACGACGCCGACGTCGCGGACTGGTTCTCCAC
CGAGACCGATCCGGCGATCGCGCAGGCGGTGGCCAAGGCCGAGGCGATCGCCCGCCAGCCGGCGGACGGCCCGACGGGGG
AGCTGACCCAATAG

Upstream 100 bases:

>100_bases
ACCCGGTGAGCCGGTCACCGTCATGCAGATCGACGGCGCCACCGCAGTGGTCTTCAAGAGCAGTCTTTAGCGAAAAGGGC
TGCAAGAGAAAGGAATTCCA

Downstream 100 bases:

>100_bases
CCTCCCTAGGATTGCCCCATGAGTGCGTTGACTTCACCGAAGACCTACGCGGCGCTGGGCGTGTTCCACGCCGTCGACGC
GGTCGCGTGCGGCGTCCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MQGAVAGLVLLAVLVIFAIVVVAKSVALIPQAEAAVIERLGRYSRTVSGQLTLLVPFIDRIRARVDLRERVVSFPPQPVI
TEDNLTLNIDTVVYFQVTVPQAAVYEISNYIVGVEQLTTTTLRNVVGGMTLEQTLTSRDQINGQLRGVLDEATGRWGLRV
ARVELRSIDPPPSIQASMEKQMKADREKRAMILTAEGMRESAIKEAEGQKQAQILAAEGAKQAAILAAEADRQSRMLRAQ
GERAAAYLQAQGQAKAIEKTFAAIKAGRPTPEMLAYQYLQTLPEMARGDANKVWVVPSDFSAALQGFTKLLGTPGQDGVF
RFQPSPVEDVPKHSADDDADVADWFSTETDPAIAQAVAKAEAIARQPADGPTGELTQ

Sequences:

>Translated_377_residues
MQGAVAGLVLLAVLVIFAIVVVAKSVALIPQAEAAVIERLGRYSRTVSGQLTLLVPFIDRIRARVDLRERVVSFPPQPVI
TEDNLTLNIDTVVYFQVTVPQAAVYEISNYIVGVEQLTTTTLRNVVGGMTLEQTLTSRDQINGQLRGVLDEATGRWGLRV
ARVELRSIDPPPSIQASMEKQMKADREKRAMILTAEGMRESAIKEAEGQKQAQILAAEGAKQAAILAAEADRQSRMLRAQ
GERAAAYLQAQGQAKAIEKTFAAIKAGRPTPEMLAYQYLQTLPEMARGDANKVWVVPSDFSAALQGFTKLLGTPGQDGVF
RFQPSPVEDVPKHSADDDADVADWFSTETDPAIAQAVAKAEAIARQPADGPTGELTQ
>Mature_377_residues
MQGAVAGLVLLAVLVIFAIVVVAKSVALIPQAEAAVIERLGRYSRTVSGQLTLLVPFIDRIRARVDLRERVVSFPPQPVI
TEDNLTLNIDTVVYFQVTVPQAAVYEISNYIVGVEQLTTTTLRNVVGGMTLEQTLTSRDQINGQLRGVLDEATGRWGLRV
ARVELRSIDPPPSIQASMEKQMKADREKRAMILTAEGMRESAIKEAEGQKQAQILAAEGAKQAAILAAEADRQSRMLRAQ
GERAAAYLQAQGQAKAIEKTFAAIKAGRPTPEMLAYQYLQTLPEMARGDANKVWVVPSDFSAALQGFTKLLGTPGQDGVF
RFQPSPVEDVPKHSADDDADVADWFSTETDPAIAQAVAKAEAIARQPADGPTGELTQ

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=196, Percent_Identity=41.8367346938776, Blast_Score=169, Evalue=5e-42,
Organism=Homo sapiens, GI21686995, Length=222, Percent_Identity=34.6846846846847, Blast_Score=112, Evalue=8e-25,
Organism=Homo sapiens, GI221316744, Length=221, Percent_Identity=34.841628959276, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI38016911, Length=209, Percent_Identity=34.9282296650718, Blast_Score=105, Evalue=7e-23,
Organism=Homo sapiens, GI7657615, Length=193, Percent_Identity=25.3886010362694, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI20149563, Length=164, Percent_Identity=28.0487804878049, Blast_Score=66, Evalue=6e-11,
Organism=Escherichia coli, GI1786697, Length=309, Percent_Identity=37.5404530744337, Blast_Score=218, Evalue=8e-58,
Organism=Caenorhabditis elegans, GI32564147, Length=282, Percent_Identity=35.8156028368794, Blast_Score=160, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI193209764, Length=193, Percent_Identity=33.6787564766839, Blast_Score=112, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI17569493, Length=193, Percent_Identity=33.6787564766839, Blast_Score=111, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI25153583, Length=207, Percent_Identity=36.231884057971, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71987612, Length=207, Percent_Identity=36.231884057971, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI193210507, Length=243, Percent_Identity=32.9218106995885, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17570161, Length=243, Percent_Identity=32.9218106995885, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI71987621, Length=205, Percent_Identity=35.1219512195122, Blast_Score=104, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI17569497, Length=195, Percent_Identity=32.8205128205128, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17569499, Length=177, Percent_Identity=35.5932203389831, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71989948, Length=158, Percent_Identity=37.9746835443038, Blast_Score=98, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI71989955, Length=158, Percent_Identity=37.9746835443038, Blast_Score=98, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI32566490, Length=198, Percent_Identity=31.8181818181818, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17570459, Length=209, Percent_Identity=33.4928229665072, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI71989963, Length=121, Percent_Identity=37.1900826446281, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI45550506, Length=278, Percent_Identity=33.8129496402878, Blast_Score=159, Evalue=2e-39,
Organism=Drosophila melanogaster, GI18860517, Length=211, Percent_Identity=35.5450236966825, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI281361633, Length=203, Percent_Identity=33.0049261083744, Blast_Score=115, Evalue=3e-26,
Organism=Drosophila melanogaster, GI281361631, Length=203, Percent_Identity=33.0049261083744, Blast_Score=115, Evalue=4e-26,
Organism=Drosophila melanogaster, GI21356845, Length=226, Percent_Identity=29.2035398230088, Blast_Score=109, Evalue=4e-24,
Organism=Drosophila melanogaster, GI45556022, Length=206, Percent_Identity=35.9223300970874, Blast_Score=105, Evalue=5e-23,
Organism=Drosophila melanogaster, GI281365664, Length=208, Percent_Identity=37.0192307692308, Blast_Score=105, Evalue=6e-23,
Organism=Drosophila melanogaster, GI24657857, Length=208, Percent_Identity=37.0192307692308, Blast_Score=105, Evalue=7e-23,
Organism=Drosophila melanogaster, GI62484448, Length=208, Percent_Identity=37.0192307692308, Blast_Score=104, Evalue=9e-23,
Organism=Drosophila melanogaster, GI28573263, Length=206, Percent_Identity=33.0097087378641, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI62484274, Length=208, Percent_Identity=37.0192307692308, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI281361635, Length=142, Percent_Identity=35.2112676056338, Blast_Score=91, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 40802; Mature: 40802

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS00024 HEMOPEXIN ; PS01270 BAND_7

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGAVAGLVLLAVLVIFAIVVVAKSVALIPQAEAAVIERLGRYSRTVSGQLTLLVPFIDR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHH
IRARVDLRERVVSFPPQPVITEDNLTLNIDTVVYFQVTVPQAAVYEISNYIVGVEQLTTT
HHHHHHHHHHHHCCCCCCCEECCCEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHH
TLRNVVGGMTLEQTLTSRDQINGQLRGVLDEATGRWGLRVARVELRSIDPPPSIQASMEK
HHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCCHHHHHHH
QMKADREKRAMILTAEGMRESAIKEAEGQKQAQILAAEGAKQAAILAAEADRQSRMLRAQ
HHHHHHHHCEEEEEECCHHHHHHHHHCCHHHHHHHHHCCCCHHEEEEEHHHHHHHHHHHC
GERAAAYLQAQGQAKAIEKTFAAIKAGRPTPEMLAYQYLQTLPEMARGDANKVWVVPSDF
CHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCH
SAALQGFTKLLGTPGQDGVFRFQPSPVEDVPKHSADDDADVADWFSTETDPAIAQAVAKA
HHHHHHHHHHHCCCCCCCEEEECCCCHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHH
EAIARQPADGPTGELTQ
HHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MQGAVAGLVLLAVLVIFAIVVVAKSVALIPQAEAAVIERLGRYSRTVSGQLTLLVPFIDR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHH
IRARVDLRERVVSFPPQPVITEDNLTLNIDTVVYFQVTVPQAAVYEISNYIVGVEQLTTT
HHHHHHHHHHHHCCCCCCCEECCCEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHH
TLRNVVGGMTLEQTLTSRDQINGQLRGVLDEATGRWGLRVARVELRSIDPPPSIQASMEK
HHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCCHHHHHHH
QMKADREKRAMILTAEGMRESAIKEAEGQKQAQILAAEGAKQAAILAAEADRQSRMLRAQ
HHHHHHHHCEEEEEECCHHHHHHHHHCCHHHHHHHHHCCCCHHEEEEEHHHHHHHHHHHC
GERAAAYLQAQGQAKAIEKTFAAIKAGRPTPEMLAYQYLQTLPEMARGDANKVWVVPSDF
CHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCH
SAALQGFTKLLGTPGQDGVFRFQPSPVEDVPKHSADDDADVADWFSTETDPAIAQAVAKA
HHHHHHHHHHHCCCCCCCEEEECCCCHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHH
EAIARQPADGPTGELTQ
HHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]