| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407137
Identifier: 41407137
GI number: 41407137
Start: 1083767
End: 1084711
Strand: Direct
Name: 41407137
Synonym: MAP1039
Alternate gene names: NA
Gene position: 1083767-1084711 (Clockwise)
Preceding gene: 41407136
Following gene: 41407140
Centisome position: 22.44
GC content: 73.12
Gene sequence:
>945_bases GTGCGCCGGTGTCGGGTCGAGGGCCGCGGCGGCGGTGCCGCCGGTGGGTCTGCGCGGAGCGGGGCGCGGGCCGTACCGTC CCCGGGCGGCTGCGGGGCGGCCCCGACGAGGGTCGCGGGTCGCCGGACTTCACCAGTAACAGCAGCCTCACCAGCCTCAA TGGCCACCGGGGGCGGTGGCTTTGACCCCGCCGCGTGGGTTACTAGTGGAAACCGCCGGGTACCCATGTCCAGCCGGAAA TACGCCGGTATTCAACGAGGGGATGTCATGAAATACGCAGAGGACGGCCACACCCGCGGGCTGAGCATGCCCCGCTCGCG CGGCGCGGTCAGCGGACTGCTCCTGGTGATCCTGGGAGCTTGGGGGGCGTTAATACCGTTTGTGGGTCCACACTTCAATT TCGCCTACACGCCGGACAGAGACTGGGCCTGGAGCTCGGCCCGCGGCTGGCTGGAGGTGGCGCCGGGCGCGGCCACCGCG CTGGGTGGGCTGTTGCTGATCGTCGCCGGCAACCGGGTCGCGGCGATGCTGGGCGGCTGGCTGGCCGTGCTGGCCGGCGC CTGGTTCGTGGTGGGCGGCCAGCTCGCCCCGCTGCTGGGCATCGGCTCGGCCGGTGACCCGATCGCCGCGACCGAGCGCA AGCGCGCGCTGCTCGAGGTCACCTATTTTTCGGGCCTGGGCGCGCTGATCATCTTCGTGGGCGGGGTCGTGCTGGCCCGC ACCAGCGCGCGCCTGGCCCGTGACGTGCAGCCACTGGCGTCCGACGCCCCGGCGGCGCCGGCCGTTGAGCCGTACCGGGA TCCGGCCTACGACCCGGCCGACGTCTCCTCGGGGGCGCTGACCAAACCGCGGACCTCGGCCGACCCCGAGCCGAAGCGGG GATGGCGCAAGAACCGCGCCGGCGGCAACGCCGCGTACCTGCGCTGGCCGCACCCGCAGCAGTAG
Upstream 100 bases:
>100_bases GAGACCACCGCGGCGCCCGGCTTCCACCAACCCGTTCCCCGGCCGCCGTCGGCGCCTCGGGAACCGACGCAATCCTCTTG GGGCACAAGGCCATTGGTGT
Downstream 100 bases:
>100_bases AGTTATCCGTCGATCAACGCAATCGCCCAGTCCCGCAACGGGACTGGGCGATTGCGTTCTTGACCGTCAGAGCAGCCCGA GCAGCTGCAGGTCGGTGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MRRCRVEGRGGGAAGGSARSGARAVPSPGGCGAAPTRVAGRRTSPVTAASPASMATGGGGFDPAAWVTSGNRRVPMSSRK YAGIQRGDVMKYAEDGHTRGLSMPRSRGAVSGLLLVILGAWGALIPFVGPHFNFAYTPDRDWAWSSARGWLEVAPGAATA LGGLLLIVAGNRVAAMLGGWLAVLAGAWFVVGGQLAPLLGIGSAGDPIAATERKRALLEVTYFSGLGALIIFVGGVVLAR TSARLARDVQPLASDAPAAPAVEPYRDPAYDPADVSSGALTKPRTSADPEPKRGWRKNRAGGNAAYLRWPHPQQ
Sequences:
>Translated_314_residues MRRCRVEGRGGGAAGGSARSGARAVPSPGGCGAAPTRVAGRRTSPVTAASPASMATGGGGFDPAAWVTSGNRRVPMSSRK YAGIQRGDVMKYAEDGHTRGLSMPRSRGAVSGLLLVILGAWGALIPFVGPHFNFAYTPDRDWAWSSARGWLEVAPGAATA LGGLLLIVAGNRVAAMLGGWLAVLAGAWFVVGGQLAPLLGIGSAGDPIAATERKRALLEVTYFSGLGALIIFVGGVVLAR TSARLARDVQPLASDAPAAPAVEPYRDPAYDPADVSSGALTKPRTSADPEPKRGWRKNRAGGNAAYLRWPHPQQ >Mature_314_residues MRRCRVEGRGGGAAGGSARSGARAVPSPGGCGAAPTRVAGRRTSPVTAASPASMATGGGGFDPAAWVTSGNRRVPMSSRK YAGIQRGDVMKYAEDGHTRGLSMPRSRGAVSGLLLVILGAWGALIPFVGPHFNFAYTPDRDWAWSSARGWLEVAPGAATA LGGLLLIVAGNRVAAMLGGWLAVLAGAWFVVGGQLAPLLGIGSAGDPIAATERKRALLEVTYFSGLGALIIFVGGVVLAR TSARLARDVQPLASDAPAAPAVEPYRDPAYDPADVSSGALTKPRTSADPEPKRGWRKNRAGGNAAYLRWPHPQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32312; Mature: 32312
Theoretical pI: Translated: 11.44; Mature: 11.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRCRVEGRGGGAAGGSARSGARAVPSPGGCGAAPTRVAGRRTSPVTAASPASMATGGGG CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC FDPAAWVTSGNRRVPMSSRKYAGIQRGDVMKYAEDGHTRGLSMPRSRGAVSGLLLVILGA CCCHHEEECCCEECCCCCCHHCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH WGALIPFVGPHFNFAYTPDRDWAWSSARGWLEVAPGAATALGGLLLIVAGNRVAAMLGGW HHHHHHCCCCCCCEEECCCCCCCCCCCCCCEEECCCHHHHHCCEEEEEECCHHHHHHHHH LAVLAGAWFVVGGQLAPLLGIGSAGDPIAATERKRALLEVTYFSGLGALIIFVGGVVLAR HHHHHHHHHHHCCCHHHHEECCCCCCCCHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHH TSARLARDVQPLASDAPAAPAVEPYRDPAYDPADVSSGALTKPRTSADPEPKRGWRKNRA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC GGNAAYLRWPHPQQ CCCEEEEECCCCCC >Mature Secondary Structure MRRCRVEGRGGGAAGGSARSGARAVPSPGGCGAAPTRVAGRRTSPVTAASPASMATGGGG CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC FDPAAWVTSGNRRVPMSSRKYAGIQRGDVMKYAEDGHTRGLSMPRSRGAVSGLLLVILGA CCCHHEEECCCEECCCCCCHHCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH WGALIPFVGPHFNFAYTPDRDWAWSSARGWLEVAPGAATALGGLLLIVAGNRVAAMLGGW HHHHHHCCCCCCCEEECCCCCCCCCCCCCCEEECCCHHHHHCCEEEEEECCHHHHHHHHH LAVLAGAWFVVGGQLAPLLGIGSAGDPIAATERKRALLEVTYFSGLGALIIFVGGVVLAR HHHHHHHHHHHCCCHHHHEECCCCCCCCHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHH TSARLARDVQPLASDAPAAPAVEPYRDPAYDPADVSSGALTKPRTSADPEPKRGWRKNRA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC GGNAAYLRWPHPQQ CCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA