| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is CpsH
Identifier: 41407058
GI number: 41407058
Start: 994149
End: 994634
Strand: Direct
Name: CpsH
Synonym: MAP0960
Alternate gene names: NA
Gene position: 994149-994634 (Clockwise)
Preceding gene: 41407057
Following gene: 41407065
Centisome position: 20.58
GC content: 71.6
Gene sequence:
>486_bases GTGATCTTCGTGATCATGGGCATGGAGGTGCATCCGTTCGACCGGTTGGCGCGCGCGGTCGACGAGCTGGCGCGCACGGA CGCGGTGGGCGAGGAGTTCTTCGTGCAGCTCGGGACGTGCCGGTTCGAGCCGCGCCACGCCCGGTTCGAGCGCTTCTTGT CCTTCGGCGACGTCTGCGAGCAGATCCGGCGCGCCTCGGTCGCGGTCACCCACGCCGGCGCCGGATCGACGCTGCTGTGC ATCGAGCAGGGCAAGCATCCGGTGATGGTGCCGCGCCGTTCGTCGCGCGGCGAGCACGTCGACGATCATCAGCTGCCGTT CGCCGAGAAGTTGGCCACTGCCGGGCTGGCCACGGTGGTGCGCGAGACCACCGAGCTGCCGGCGGCCATCGCGGCCACCC GGTCCCGGTCGGCTCCCGCCGATGCGCTGGGCCGGGCCCGCGAACTCACCGGCTGGCTGGAGACGTTCTGGCGCGGGTTG GCCTGA
Upstream 100 bases:
>100_bases TGACCGCGCGGATGGTCAAGCCGTTCGCCTCCCACCTCCTGGTGCAGTGGCCCGAGCTGGCCGAGAGGATCCCGGCCGCC GAATACCACGGGAGGATCGT
Downstream 100 bases:
>100_bases GCATCCGGTCATCCTCGCCGCGCCAGCACCTCGGCGACCACGTCCAAAATGCGTTCCGCGACAAGGTCGACCGCGCACCG GCGCTGGTAGTGGCGTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Beta-1 4-Galactosyltransferase; Glycosyltransferase Family; Glycosyl Transferase Family Protein; Glycosyl Transferase; 28 Glycosyltransferase; Family; Glucuronosyltransferase Protein; Glucosyltransferase EpsF-Like Protein; Exopolysaccharide Biosynthesis Protein Glycosyltransferase; EpsIG Glycosyltransferase; Polysaccharide Biosynthesis Protein CpsG; Polysaccharide Biosynthesis Glucuronosyltransferase Protein; Glucuronic Acid Transferase; Ss-1 4-Galactosyltransferase; D-Glucuronyl C5-Epimerase Domain Protein; Glucosyltransferase
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MIFVIMGMEVHPFDRLARAVDELARTDAVGEEFFVQLGTCRFEPRHARFERFLSFGDVCEQIRRASVAVTHAGAGSTLLC IEQGKHPVMVPRRSSRGEHVDDHQLPFAEKLATAGLATVVRETTELPAAIAATRSRSAPADALGRARELTGWLETFWRGL A
Sequences:
>Translated_161_residues MIFVIMGMEVHPFDRLARAVDELARTDAVGEEFFVQLGTCRFEPRHARFERFLSFGDVCEQIRRASVAVTHAGAGSTLLC IEQGKHPVMVPRRSSRGEHVDDHQLPFAEKLATAGLATVVRETTELPAAIAATRSRSAPADALGRARELTGWLETFWRGL A >Mature_161_residues MIFVIMGMEVHPFDRLARAVDELARTDAVGEEFFVQLGTCRFEPRHARFERFLSFGDVCEQIRRASVAVTHAGAGSTLLC IEQGKHPVMVPRRSSRGEHVDDHQLPFAEKLATAGLATVVRETTELPAAIAATRSRSAPADALGRARELTGWLETFWRGL A
Specific function: Unknown
COG id: COG5017
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17802; Mature: 17802
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: PS01076 ACETATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFVIMGMEVHPFDRLARAVDELARTDAVGEEFFVQLGTCRFEPRHARFERFLSFGDVCE CEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH QIRRASVAVTHAGAGSTLLCIEQGKHPVMVPRRSSRGEHVDDHQLPFAEKLATAGLATVV HHHHHHHHEEECCCCCEEEEEECCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH RETTELPAAIAATRSRSAPADALGRARELTGWLETFWRGLA HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIFVIMGMEVHPFDRLARAVDELARTDAVGEEFFVQLGTCRFEPRHARFERFLSFGDVCE CEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH QIRRASVAVTHAGAGSTLLCIEQGKHPVMVPRRSSRGEHVDDHQLPFAEKLATAGLATVV HHHHHHHHEEECCCCCEEEEEECCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH RETTELPAAIAATRSRSAPADALGRARELTGWLETFWRGLA HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA