| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is gmhB [H]
Identifier: 41407035
GI number: 41407035
Start: 966775
End: 967341
Strand: Direct
Name: gmhB [H]
Synonym: MAP0937
Alternate gene names: 41407035
Gene position: 966775-967341 (Clockwise)
Preceding gene: 41407034
Following gene: 41407036
Centisome position: 20.02
GC content: 71.43
Gene sequence:
>567_bases ATGCCCGCACCCGAGCTGCGCGACGTCCGCACGGTCTTCCTGGACCGCGACGGCACCGTCAACGTCAAGGCCGCCGAGGG CGAGTACATCAAGTCGCCGGCCGAGCTGGTGCTGTTGCCCGGTGCGGCCCGGGCGCTGGCCGCGCTGAACGCTGCGGGCC TGCGGACCGTGTTGGTCACCAATCAGCGCTGGCTCTCCGAGCCGACGGCGGCGCCGGCCGATTTCGCCGCCGTACACGAC CGGCTGGTACGACTGCTCGCCGACCGGGGCGCGCGCATCGATGCCGCTTACCACTGCCCCCACCCCGCGAACAGCTGCGA CTGCCGCAAACCCGGCCCCGGCATGCTGTTGCGCGCGGCGGCCGAGCACGACGTGGATTTGGCCGCTTCCGTCATGATCG GCGACAGCGACGTCGACATGGTGGCGGGCCGCGCGGCCGGAACGAAGACGATTCTGATCCGCCCCGGCGCCCGGCAGGCC GTCGCAGAGGCCGATTTCGTGGTCGACGACCTGGCCGCGGCCGTCGAACTCATCCTGAATGCCGGAAAAACCCCGCCTGC CGGGTGA
Upstream 100 bases:
>100_bases ACGACACCGGCCGGATCCAGGAAGCGAGCCTGCACCTGGGGCATTCGATTTGCGAAATGGTCGAAGCGGCACTGTTTCCC CGGCCGTCCTGACCGCGACG
Downstream 100 bases:
>100_bases TCGGCGCTGCCTGCTTGCCGCGGTCGTGACCTGCTCATAACCTTGGCAACATCCGAGCGCGTCGGGGAGCGTGGGGCCTG GCGCAACCGACAAATGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [H]
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MPAPELRDVRTVFLDRDGTVNVKAAEGEYIKSPAELVLLPGAARALAALNAAGLRTVLVTNQRWLSEPTAAPADFAAVHD RLVRLLADRGARIDAAYHCPHPANSCDCRKPGPGMLLRAAAEHDVDLAASVMIGDSDVDMVAGRAAGTKTILIRPGARQA VAEADFVVDDLAAAVELILNAGKTPPAG
Sequences:
>Translated_188_residues MPAPELRDVRTVFLDRDGTVNVKAAEGEYIKSPAELVLLPGAARALAALNAAGLRTVLVTNQRWLSEPTAAPADFAAVHD RLVRLLADRGARIDAAYHCPHPANSCDCRKPGPGMLLRAAAEHDVDLAASVMIGDSDVDMVAGRAAGTKTILIRPGARQA VAEADFVVDDLAAAVELILNAGKTPPAG >Mature_187_residues PAPELRDVRTVFLDRDGTVNVKAAEGEYIKSPAELVLLPGAARALAALNAAGLRTVLVTNQRWLSEPTAAPADFAAVHDR LVRLLADRGARIDAAYHCPHPANSCDCRKPGPGMLLRAAAEHDVDLAASVMIGDSDVDMVAGRAAGTKTILIRPGARQAV AEADFVVDDLAAAVELILNAGKTPPAG
Specific function: Converts the D-glycero-beta-D-manno-heptose 1,7- bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1- phosphate by removing the phosphate group at the C-7 position [H]
COG id: COG0241
COG function: function code E; Histidinol phosphatase and related phosphatases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gmhB family [H]
Homologues:
Organism=Escherichia coli, GI1786399, Length=178, Percent_Identity=37.6404494382022, Blast_Score=102, Evalue=1e-23, Organism=Escherichia coli, GI87082027, Length=139, Percent_Identity=33.0935251798561, Blast_Score=86, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR004446 - InterPro: IPR006543 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 19617; Mature: 19485
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAPELRDVRTVFLDRDGTVNVKAAEGEYIKSPAELVLLPGAARALAALNAAGLRTVLVT CCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHCCEEEEEEE NQRWLSEPTAAPADFAAVHDRLVRLLADRGARIDAAYHCPHPANSCDCRKPGPGMLLRAA CCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEC AEHDVDLAASVMIGDSDVDMVAGRAAGTKTILIRPGARQAVAEADFVVDDLAAAVELILN CCCCCCEEEEEEECCCCHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH AGKTPPAG CCCCCCCC >Mature Secondary Structure PAPELRDVRTVFLDRDGTVNVKAAEGEYIKSPAELVLLPGAARALAALNAAGLRTVLVT CCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHCCEEEEEEE NQRWLSEPTAAPADFAAVHDRLVRLLADRGARIDAAYHCPHPANSCDCRKPGPGMLLRAA CCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEC AEHDVDLAASVMIGDSDVDMVAGRAAGTKTILIRPGARQAVAEADFVVDDLAAAVELILN CCCCCCEEEEEEECCCCHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH AGKTPPAG CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]