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The map label for this gene is 41406964

Identifier: 41406964

GI number: 41406964

Start: 888649

End: 889452

Strand: Direct

Name: 41406964

Synonym: MAP0866

Alternate gene names: NA

Gene position: 888649-889452 (Clockwise)

Preceding gene: 41406963

Following gene: 41406970

Centisome position: 18.4

GC content: 61.69

Gene sequence:

>804_bases
TTGATCGTCGTAGCCGGATACTGCGGTCTACGCTGGGGCGAACTTGCTGCGCTGCGATGGGCCGATGTCGACCTCGCCAA
CAAGACTCTGCGAGTCGCCCGGGCCTATTCCGAGGAAGCGCCGCGGGGCGAGATGTCACCAGTCAAGGACCACCAGGCCC
GAACGGTGCCGATTCCTGCGATCGTGTCAGAGGAACTCGCCACATTCAGGACAGATCAGAAACCAAATGACCTCGTGTTT
CCATCTGCGAACGGTACGCCGCTCCGGAACCGGAATTTTCGTCGTGACGTATTCGACGACGCCGCAGAAGATCTTGGGCT
CAACATCACCCCACACAATTTGCGGGACACTGCGGCGTCGCTTGCGATCCAAGCGGGCGCGTCCGTCGTCGCGGTGGCTC
GACTGCTTGGGCACGAATCTGCCGCGACCACGCTGAACCACTACGCGGCCTTCTTCCCGACTGACCTGGACGATGTGGCG
TCACGGCTCAATGCGGCAGCTCGGCTGACAATCGCAGTGCAGCGTGCTCGGCAGGACCGCGAGGCCAGAATCGAAGGCGA
GCTGGGGCAACAGCCTGGCTACATCGAGCAGCTGGAATACGATGCCGCGCACCCCGAAAACGCGGTGGAAGTCGATGGTG
AGCAGGCGTCCGCACGGGACGAAACGGAGTATCTTCTGAGCTCGCCTGAGAATGCACGTCGACTCCTGGAAGCCCTGGGC
CGAGACAAAGCAATCCATCCGGCACCATCGGATACCACAGAAGCACCGACCACACACCGACCAGAGAGGAGTGACGAGCA
GTAG

Upstream 100 bases:

>100_bases
CATCCGCTTGCCGAAGGTGCAAGGCAACGATCCGCGCCCGCTCACTCACGACGAACTGTGGCGACTGGCTGACCACATGA
ACCAATTGCGTGACCGACTC

Downstream 100 bases:

>100_bases
GGCAAGCGCCCGGAAACCCTCGCTGACCTGCAAAAATGGTGAGTGCCCCCGGCAGGATTCGAACCTGCGACACCGGCTTT
AGGAGAGCCGTGCTCTATCC

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Integrase; Phage Integrase Family Protein; Phage-Related Integrase; Integrase; Site-Specific Recombinase XerD; Prophage Integrase; Site-Specific Integrase; Integrase/Recombinase

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MIVVAGYCGLRWGELAALRWADVDLANKTLRVARAYSEEAPRGEMSPVKDHQARTVPIPAIVSEELATFRTDQKPNDLVF
PSANGTPLRNRNFRRDVFDDAAEDLGLNITPHNLRDTAASLAIQAGASVVAVARLLGHESAATTLNHYAAFFPTDLDDVA
SRLNAAARLTIAVQRARQDREARIEGELGQQPGYIEQLEYDAAHPENAVEVDGEQASARDETEYLLSSPENARRLLEALG
RDKAIHPAPSDTTEAPTTHRPERSDEQ

Sequences:

>Translated_267_residues
MIVVAGYCGLRWGELAALRWADVDLANKTLRVARAYSEEAPRGEMSPVKDHQARTVPIPAIVSEELATFRTDQKPNDLVF
PSANGTPLRNRNFRRDVFDDAAEDLGLNITPHNLRDTAASLAIQAGASVVAVARLLGHESAATTLNHYAAFFPTDLDDVA
SRLNAAARLTIAVQRARQDREARIEGELGQQPGYIEQLEYDAAHPENAVEVDGEQASARDETEYLLSSPENARRLLEALG
RDKAIHPAPSDTTEAPTTHRPERSDEQ
>Mature_267_residues
MIVVAGYCGLRWGELAALRWADVDLANKTLRVARAYSEEAPRGEMSPVKDHQARTVPIPAIVSEELATFRTDQKPNDLVF
PSANGTPLRNRNFRRDVFDDAAEDLGLNITPHNLRDTAASLAIQAGASVVAVARLLGHESAATTLNHYAAFFPTDLDDVA
SRLNAAARLTIAVQRARQDREARIEGELGQQPGYIEQLEYDAAHPENAVEVDGEQASARDETEYLLSSPENARRLLEALG
RDKAIHPAPSDTTEAPTTHRPERSDEQ

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29268; Mature: 29268

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVVAGYCGLRWGELAALRWADVDLANKTLRVARAYSEEAPRGEMSPVKDHQARTVPIPA
CEEEEECCCCCHHHHHHEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
IVSEELATFRTDQKPNDLVFPSANGTPLRNRNFRRDVFDDAAEDLGLNITPHNLRDTAAS
HHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH
LAIQAGASVVAVARLLGHESAATTLNHYAAFFPTDLDDVASRLNAAARLTIAVQRARQDR
HHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EARIEGELGQQPGYIEQLEYDAAHPENAVEVDGEQASARDETEYLLSSPENARRLLEALG
HHHCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHC
RDKAIHPAPSDTTEAPTTHRPERSDEQ
CCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIVVAGYCGLRWGELAALRWADVDLANKTLRVARAYSEEAPRGEMSPVKDHQARTVPIPA
CEEEEECCCCCHHHHHHEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
IVSEELATFRTDQKPNDLVFPSANGTPLRNRNFRRDVFDDAAEDLGLNITPHNLRDTAAS
HHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH
LAIQAGASVVAVARLLGHESAATTLNHYAAFFPTDLDDVASRLNAAARLTIAVQRARQDR
HHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EARIEGELGQQPGYIEQLEYDAAHPENAVEVDGEQASARDETEYLLSSPENARRLLEALG
HHHCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHC
RDKAIHPAPSDTTEAPTTHRPERSDEQ
CCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA