| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406956
Identifier: 41406956
GI number: 41406956
Start: 881207
End: 881755
Strand: Direct
Name: 41406956
Synonym: MAP0858
Alternate gene names: NA
Gene position: 881207-881755 (Clockwise)
Preceding gene: 41406953
Following gene: 41406959
Centisome position: 18.25
GC content: 61.02
Gene sequence:
>549_bases GTGCGCTGGACACGGCGCAAGCCGAGGTCACAGACGCTGACATTCGCGATCGAAGCCAGGTGCCGGGAGTGCCACTACAA GGCGACGGAGCGTGCAAAGGTCACTACATATCCGGCCGAACGCGTCGCTGATCAGCTTCGGCCAACGCCGCCTGCAGTGC CGTCAAAATTCGGCGGGTTGTGGATCCTCGCTGTGGTTTCGGCGTCCAACTCGTCGACACCGGCGATTAGCCCTTCAGCA AAGTGCTCCCGGAGCGCGGCGGTCTGCCAATCGTCGTCGACAGCGCCGTGCATCCGCTTACGCAGTTCGAGGCCCAGTTG GTCGCGAGCGGATTGTTCACTTGCGCCGCTGACGTCCCATTCCGCGCCAGGGTATCGCGCCGTCCATGATCGGTCTTCGT ACTCCGCAGTTTGCGGGACGAACGCGAAGGCTCTCCCAGTGGTGCGCATGAAGTCTTCCAAATTCGTGCTGCGGTCTTCG GTATTTGCCATCAGTTGTCCCCTGCGACATCCGTGCGATCTTTCTGAATTAACTCGGCGATCACGTTGA
Upstream 100 bases:
>100_bases CGCCGTGTTGTGGAGCCGCGGCTCGGCTGGTGACTATGTGGTGTTCGTCGGCGTGATGCCGATCGCGAGGTAGGGGCGCA CCCAACCGACCAGTGACGTA
Downstream 100 bases:
>100_bases GCGATACAGGCGAAAGACCCCACGCATCAAGGCCAACATGGATGGTGCGGCCAGCGAGTCGCCGTGAACTGTGGATATGA CCGTGCAGCAGCCATGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MRWTRRKPRSQTLTFAIEARCRECHYKATERAKVTTYPAERVADQLRPTPPAVPSKFGGLWILAVVSASNSSTPAISPSA KCSRSAAVCQSSSTAPCIRLRSSRPSWSRADCSLAPLTSHSAPGYRAVHDRSSYSAVCGTNAKALPVVRMKSSKFVLRSS VFAISCPLRHPCDLSELTRRSR
Sequences:
>Translated_182_residues MRWTRRKPRSQTLTFAIEARCRECHYKATERAKVTTYPAERVADQLRPTPPAVPSKFGGLWILAVVSASNSSTPAISPSA KCSRSAAVCQSSSTAPCIRLRSSRPSWSRADCSLAPLTSHSAPGYRAVHDRSSYSAVCGTNAKALPVVRMKSSKFVLRSS VFAISCPLRHPCDLSELTRRSR >Mature_182_residues MRWTRRKPRSQTLTFAIEARCRECHYKATERAKVTTYPAERVADQLRPTPPAVPSKFGGLWILAVVSASNSSTPAISPSA KCSRSAAVCQSSSTAPCIRLRSSRPSWSRADCSLAPLTSHSAPGYRAVHDRSSYSAVCGTNAKALPVVRMKSSKFVLRSS VFAISCPLRHPCDLSELTRRSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19925; Mature: 19925
Theoretical pI: Translated: 11.28; Mature: 11.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWTRRKPRSQTLTFAIEARCRECHYKATERAKVTTYPAERVADQLRPTPPAVPSKFGGL CCCCCCCCCCCEEEEEEEHHHHHHCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCE WILAVVSASNSSTPAISPSAKCSRSAAVCQSSSTAPCIRLRSSRPSWSRADCSLAPLTSH EEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCCEECCCCCC SAPGYRAVHDRSSYSAVCGTNAKALPVVRMKSSKFVLRSSVFAISCPLRHPCDLSELTRR CCCCCCEECCCCCCCEEECCCCCCEEEEEECCCCEEEECCEEEEECCCCCCCCHHHHHHC SR CC >Mature Secondary Structure MRWTRRKPRSQTLTFAIEARCRECHYKATERAKVTTYPAERVADQLRPTPPAVPSKFGGL CCCCCCCCCCCEEEEEEEHHHHHHCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCE WILAVVSASNSSTPAISPSAKCSRSAAVCQSSSTAPCIRLRSSRPSWSRADCSLAPLTSH EEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCCEECCCCCC SAPGYRAVHDRSSYSAVCGTNAKALPVVRMKSSKFVLRSSVFAISCPLRHPCDLSELTRR CCCCCCEECCCCCCCEEECCCCCCEEEEEECCCCEEEECCEEEEECCCCCCCCHHHHHHC SR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA