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The map label for this gene is rutA [H]

Identifier: 41406893

GI number: 41406893

Start: 815957

End: 816913

Strand: Direct

Name: rutA [H]

Synonym: MAP0795

Alternate gene names: 41406893

Gene position: 815957-816913 (Clockwise)

Preceding gene: 41406892

Following gene: 41406895

Centisome position: 16.89

GC content: 68.76

Gene sequence:

>957_bases
ATGGATCTGGTCGGCATCGAACCCGACGAGCACTGGGCGGTGATGCGCGACCTGGCGCAGCGCGCGGATCGGGACGCCGG
CTGGGATTCGCTGTGGGTCTACGACCATTTCCACACCGTCCCGGTGCCCACCGGAGAAGCCACCCACGAGGCGTGGTCGC
TGATGGCCGCCTACGCGGCGGTCACCTCGCGGATCAAACTCGGCCAGATGTGCACGGCGATGAGCTATCGCAACCCGGTC
TACCTCGCCAAGGTCGCCGCGACGGCCGACATCATCTCCGGCGGCCGGATCCAGATGGGCATCGGCGCCGGCTGGTACGA
ACACGAATGGCGCGCCTACGGTTACGGATTCCCCTCGGCGGGTGTGCGATTGGGCCGGCTGGACGAAGGCGTGCAGATCA
TGCGCGACGCCTGGCGCGACGGCAAGGTCAGCTTCAACGGCAGGCACTACCAGGTCGACGGCGCGATCGTCGCGCCTAAA
CCGCTGCAGGACAACGGGATTCCGCTGTGGATCGCCGGCGGCGGGGAGAAGGTGACGCTGCGCATCGCCGCGGAATACGC
GCAGTACACCAACTTCACGCCCGAGCCGGCGGCGTTCGCCCACAAGTCCGAGGTGCTGGCAGCGCATTGCCGCGACGTGG
GCACCGACTTCGACGCCATCGTGCGTTCGGTCAACGTCAACGCCGTCGTCGGCGCCTCGCGCGCCGACGACGACGACCGG
CTGCGACGGATCCGCGACCGCATGGCCGGCTACGTGGGCGAGTCCGCCGCCGATGCGATGATCGCCGGCACCAGCGGCGC
GGACTCGGCGACGGGCACCACCGAACGGGTCATCGAGCGGCTGGCCAGGCTCCGCGACCTGGGCTGCGACTACGTCATCT
GCTACTTCCCCGAGGCCGCCTACGACCGTTCCGGCATCGAGCTGTTCGAGCGGGAGATCATTCCCGCGCTGAGCTGA

Upstream 100 bases:

>100_bases
TGGGTGTCCGGCCCCGGCGGTGAAAACCGTTGCGGTGCGGCCGGTGCGGCTAGAGTCCCGGGGTATGCGCTTTGGTCTCT
TCATTCCGCAGGGCTGGCGA

Downstream 100 bases:

>100_bases
CCGTCCGGCCGCGACGCGGCGGGGTCAGATATCCGAGGTGACGTAGCGGGTCTTGACTGGGGGCGCGGCCAGCAGCGGCG
GAAGCTGCGTCAGCTTGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MDLVGIEPDEHWAVMRDLAQRADRDAGWDSLWVYDHFHTVPVPTGEATHEAWSLMAAYAAVTSRIKLGQMCTAMSYRNPV
YLAKVAATADIISGGRIQMGIGAGWYEHEWRAYGYGFPSAGVRLGRLDEGVQIMRDAWRDGKVSFNGRHYQVDGAIVAPK
PLQDNGIPLWIAGGGEKVTLRIAAEYAQYTNFTPEPAAFAHKSEVLAAHCRDVGTDFDAIVRSVNVNAVVGASRADDDDR
LRRIRDRMAGYVGESAADAMIAGTSGADSATGTTERVIERLARLRDLGCDYVICYFPEAAYDRSGIELFEREIIPALS

Sequences:

>Translated_318_residues
MDLVGIEPDEHWAVMRDLAQRADRDAGWDSLWVYDHFHTVPVPTGEATHEAWSLMAAYAAVTSRIKLGQMCTAMSYRNPV
YLAKVAATADIISGGRIQMGIGAGWYEHEWRAYGYGFPSAGVRLGRLDEGVQIMRDAWRDGKVSFNGRHYQVDGAIVAPK
PLQDNGIPLWIAGGGEKVTLRIAAEYAQYTNFTPEPAAFAHKSEVLAAHCRDVGTDFDAIVRSVNVNAVVGASRADDDDR
LRRIRDRMAGYVGESAADAMIAGTSGADSATGTTERVIERLARLRDLGCDYVICYFPEAAYDRSGIELFEREIIPALS
>Mature_318_residues
MDLVGIEPDEHWAVMRDLAQRADRDAGWDSLWVYDHFHTVPVPTGEATHEAWSLMAAYAAVTSRIKLGQMCTAMSYRNPV
YLAKVAATADIISGGRIQMGIGAGWYEHEWRAYGYGFPSAGVRLGRLDEGVQIMRDAWRDGKVSFNGRHYQVDGAIVAPK
PLQDNGIPLWIAGGGEKVTLRIAAEYAQYTNFTPEPAAFAHKSEVLAAHCRDVGTDFDAIVRSVNVNAVVGASRADDDDR
LRRIRDRMAGYVGESAADAMIAGTSGADSATGTTERVIERLARLRDLGCDYVICYFPEAAYDRSGIELFEREIIPALS

Specific function: Catalyzes the pyrimidine ring opening between N-3 and C- 4 by an unusual flavin hydroperoxide-catalyzed mechanism to yield ureidoacrylate peracid. It cleaves pyrmidine rings directly by adding oxygen atoms, making a toxic ureidoacrylate peracid product wh

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family. RutA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787247, Length=180, Percent_Identity=31.6666666666667, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787166, Length=237, Percent_Identity=29.535864978903, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR019914
- InterPro:   IPR016048 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 34908; Mature: 34908

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLVGIEPDEHWAVMRDLAQRADRDAGWDSLWVYDHFHTVPVPTGEATHEAWSLMAAYAA
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECEEECCCCCCCHHHHHHHHHHHHHH
VTSRIKLGQMCTAMSYRNPVYLAKVAATADIISGGRIQMGIGAGWYEHEWRAYGYGFPSA
HHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCEEEEECCCCCCCCCCEEECCCCCHH
GVRLGRLDEGVQIMRDAWRDGKVSFNGRHYQVDGAIVAPKPLQDNGIPLWIAGGGEKVTL
CEEECCCHHHHHHHHHHCCCCCEEECCEEEEECCEEECCCCCCCCCCEEEEECCCCEEEE
RIAAEYAQYTNFTPEPAAFAHKSEVLAAHCRDVGTDFDAIVRSVNVNAVVGASRADDDDR
EEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEECCCCCCHHH
LRRIRDRMAGYVGESAADAMIAGTSGADSATGTTERVIERLARLRDLGCDYVICYFPEAA
HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHH
YDRSGIELFEREIIPALS
CCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MDLVGIEPDEHWAVMRDLAQRADRDAGWDSLWVYDHFHTVPVPTGEATHEAWSLMAAYAA
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECEEECCCCCCCHHHHHHHHHHHHHH
VTSRIKLGQMCTAMSYRNPVYLAKVAATADIISGGRIQMGIGAGWYEHEWRAYGYGFPSA
HHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCEEEEECCCCCCCCCCEEECCCCCHH
GVRLGRLDEGVQIMRDAWRDGKVSFNGRHYQVDGAIVAPKPLQDNGIPLWIAGGGEKVTL
CEEECCCHHHHHHHHHHCCCCCEEECCEEEEECCEEECCCCCCCCCCEEEEECCCCEEEE
RIAAEYAQYTNFTPEPAAFAHKSEVLAAHCRDVGTDFDAIVRSVNVNAVVGASRADDDDR
EEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEECCCCCCHHH
LRRIRDRMAGYVGESAADAMIAGTSGADSATGTTERVIERLARLRDLGCDYVICYFPEAA
HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHH
YDRSGIELFEREIIPALS
CCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA