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The map label for this gene is ycfQ [C]

Identifier: 41406892

GI number: 41406892

Start: 815331

End: 815879

Strand: Direct

Name: ycfQ [C]

Synonym: MAP0794

Alternate gene names: 41406892

Gene position: 815331-815879 (Clockwise)

Preceding gene: 41406888

Following gene: 41406893

Centisome position: 16.88

GC content: 68.67

Gene sequence:

>549_bases
GTGGGCAGGCCCCGGTCGGACACCCGAGAGCGCATCCAACAGGTCGCTCGAGAACTGTTTTCCCAACGCGGGGTGCAGCG
CACCAGCCTGCAGGACATCGCCGACCGGCTGGGCATCACCAAACCCGCGCTGTACTACCACTTTCCGTCCCGCGAGGACC
TGGTGCGCAGCATCCTGGTGCCGCTGATCGAGGAGGGCGAGCGGTTCGTCGCCGAGCATGAGAGCCGCGAGCACACCGAG
GCGCGCGAGTTGCTGGAGGGCTATTTCGACTTCCACTACCGGCACCGCCGCGACCTGGTGCTGCTGTTGACCGAGTTGTC
CACGCTGATCGACCTCGACCTGATCGACACCGTGCTGGCGTGGCGGGAACGGCTGGCCACGCTGGTGTTCGGCAAAAGGC
CCACGCTCGCCCAATCCACGCGCGCCGTCGTCGCGTTCGGCGGGTTACAGGACTGCTGCGTGCAGTTCCCCGACGCGCCG
CAGGCCGAGCTGCGCGACAAGTCGGTCGCCGCCGCGCTTGACGCGCTGGGTGTCCGGCCCCGGCGGTGA

Upstream 100 bases:

>100_bases
GCCCGAGATGAGTATCCGCATGGCCACCTCCCGGATTTACTTAACGTTAGGTAAGCCTAGCATCCGGTTTACTTATCGGT
AAGTCAGTTAAGCTGGTGGG

Downstream 100 bases:

>100_bases
AAACCGTTGCGGTGCGGCCGGTGCGGCTAGAGTCCCGGGGTATGCGCTTTGGTCTCTTCATTCCGCAGGGCTGGCGAATG
GATCTGGTCGGCATCGAACC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator; TetR-Family Transcriptional Regulator; Trancscriptional Regulator TetR; Gamma-Butyrolactone Autoregulator Receptor; TetR-Family Regulator; TetR Family Regulator

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MGRPRSDTRERIQQVARELFSQRGVQRTSLQDIADRLGITKPALYYHFPSREDLVRSILVPLIEEGERFVAEHESREHTE
ARELLEGYFDFHYRHRRDLVLLLTELSTLIDLDLIDTVLAWRERLATLVFGKRPTLAQSTRAVVAFGGLQDCCVQFPDAP
QAELRDKSVAAALDALGVRPRR

Sequences:

>Translated_182_residues
MGRPRSDTRERIQQVARELFSQRGVQRTSLQDIADRLGITKPALYYHFPSREDLVRSILVPLIEEGERFVAEHESREHTE
ARELLEGYFDFHYRHRRDLVLLLTELSTLIDLDLIDTVLAWRERLATLVFGKRPTLAQSTRAVVAFGGLQDCCVQFPDAP
QAELRDKSVAAALDALGVRPRR
>Mature_181_residues
GRPRSDTRERIQQVARELFSQRGVQRTSLQDIADRLGITKPALYYHFPSREDLVRSILVPLIEEGERFVAEHESREHTEA
RELLEGYFDFHYRHRRDLVLLLTELSTLIDLDLIDTVLAWRERLATLVFGKRPTLAQSTRAVVAFGGLQDCCVQFPDAPQ
AELRDKSVAAALDALGVRPRR

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20909; Mature: 20778

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRPRSDTRERIQQVARELFSQRGVQRTSLQDIADRLGITKPALYYHFPSREDLVRSILV
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHEEECCCHHHHHHHHHH
PLIEEGERFVAEHESREHTEARELLEGYFDFHYRHRRDLVLLLTELSTLIDLDLIDTVLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WRERLATLVFGKRPTLAQSTRAVVAFGGLQDCCVQFPDAPQAELRDKSVAAALDALGVRP
HHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
RR
CC
>Mature Secondary Structure 
GRPRSDTRERIQQVARELFSQRGVQRTSLQDIADRLGITKPALYYHFPSREDLVRSILV
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHEEECCCHHHHHHHHHH
PLIEEGERFVAEHESREHTEARELLEGYFDFHYRHRRDLVLLLTELSTLIDLDLIDTVLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WRERLATLVFGKRPTLAQSTRAVVAFGGLQDCCVQFPDAPQAELRDKSVAAALDALGVRP
HHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
RR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA