| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406885
Identifier: 41406885
GI number: 41406885
Start: 807096
End: 807551
Strand: Direct
Name: 41406885
Synonym: MAP0787
Alternate gene names: NA
Gene position: 807096-807551 (Clockwise)
Preceding gene: 41406884
Following gene: 41406887
Centisome position: 16.71
GC content: 67.54
Gene sequence:
>456_bases GTGGCCGTGCAAGCGTCGTCGGAAATCGTCATCGACGCGCCTCCGGAGGTGATCATGGAGGCGCTCGCCGACATGGACGC GGTGCCGTCGTGGTCGTCGGTGCACAAGCGGGTCGAGGTCATCGACAAGCATCCCGACGGCAGGCCGCACCACGTGCGGG TCACGATCGCGGTGGTCGGAATCCATGACACCGAACTGCTCGAATACCACTGGGGCCCCGACTGGATGGTGTGGGACGCC GACAGGACGGCCCAGCAACACGGTCAGCACGGCGAGTACAACCTGAGCCGGCTCGGCGACGACAAGACCCGGGTGCGCTT CACCATCACGGTCGAACCGTGGGTGCCGCTACCGGAGTTCTGGGTCAGGCGGGCCCGCAAGAAGATCCTGCACGCCGCGC TGGAGGGGCTGCGCAAGCGGGTGATGACGCCGGAGGCGTTCGGCCGGGCTGACTGA
Upstream 100 bases:
>100_bases GGCGAGCGAGAACGTCCTCGACGCCGCAATGAAGGGATTGCAGGAATTGGTGATGCGCGCCAAGGATTTGAGGGATTCGG GGGAGGCGGAATAGTCGGCC
Downstream 100 bases:
>100_bases CTTAGCCGGCGCCGCGCAGCGCGGCCAGCCGCCGGATCGCCTCGTCGAGGGTGTCGTCGCGTTTACAGAAGGTGAAGCGC ACCAAGTGATTCCACACGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Polyketide Cyclase/Dehydrase; Cyclase; Polyketide Cyclase / Dehydrase Family Protein
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MAVQASSEIVIDAPPEVIMEALADMDAVPSWSSVHKRVEVIDKHPDGRPHHVRVTIAVVGIHDTELLEYHWGPDWMVWDA DRTAQQHGQHGEYNLSRLGDDKTRVRFTITVEPWVPLPEFWVRRARKKILHAALEGLRKRVMTPEAFGRAD
Sequences:
>Translated_151_residues MAVQASSEIVIDAPPEVIMEALADMDAVPSWSSVHKRVEVIDKHPDGRPHHVRVTIAVVGIHDTELLEYHWGPDWMVWDA DRTAQQHGQHGEYNLSRLGDDKTRVRFTITVEPWVPLPEFWVRRARKKILHAALEGLRKRVMTPEAFGRAD >Mature_150_residues AVQASSEIVIDAPPEVIMEALADMDAVPSWSSVHKRVEVIDKHPDGRPHHVRVTIAVVGIHDTELLEYHWGPDWMVWDAD RTAQQHGQHGEYNLSRLGDDKTRVRFTITVEPWVPLPEFWVRRARKKILHAALEGLRKRVMTPEAFGRAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17283; Mature: 17152
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVQASSEIVIDAPPEVIMEALADMDAVPSWSSVHKRVEVIDKHPDGRPHHVRVTIAVVG CCCCCCCCEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEE IHDTELLEYHWGPDWMVWDADRTAQQHGQHGEYNLSRLGDDKTRVRFTITVEPWVPLPEF CCCCEEEEEECCCCEEEECCCHHHHHCCCCCCCCHHHCCCCCCEEEEEEEECCCCCCHHH WVRRARKKILHAALEGLRKRVMTPEAFGRAD HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AVQASSEIVIDAPPEVIMEALADMDAVPSWSSVHKRVEVIDKHPDGRPHHVRVTIAVVG CCCCCCCEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEE IHDTELLEYHWGPDWMVWDADRTAQQHGQHGEYNLSRLGDDKTRVRFTITVEPWVPLPEF CCCCEEEEEECCCCEEEECCCHHHHHCCCCCCCCHHHCCCCCCEEEEEEEECCCCCCHHH WVRRARKKILHAALEGLRKRVMTPEAFGRAD HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA