| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is fadD16
Identifier: 41406879
GI number: 41406879
Start: 802469
End: 803095
Strand: Direct
Name: fadD16
Synonym: MAP0781
Alternate gene names: NA
Gene position: 802469-803095 (Clockwise)
Preceding gene: 41406878
Following gene: 41406880
Centisome position: 16.62
GC content: 66.51
Gene sequence:
>627_bases TTGAACAACGGCGATATTCATTCGATGGTGATCGCATCCGATTACCGGGTGCCGGATCCGACCCGGGTGTGGCCGCTGCT GGAACGCAACAAGGCGGCGCTCGCCGATATCGGCGCGCACCACGTGCTCGTCTACACCTCGACGCACGACTACGGCCGGG TGCTGGCGATGATCGGCGTGCACAGCCGGGAGCCGATCGTCGAACTGCTGCGGTCGCGGGTGTTCTTCGACTGGTTCGAC GAGGCCGGCGTCGACGACATCCCCGCGGTGTTCGCCGGCGAGATCGTCGACCGGTTCATCACCCAACCGCCGACGAACCC GCGGGCGCCCGGCGTCGTGGTGGCCGCGATCGCCTCGGTCAACGACGTCACCCTGCTGACCTCCGAAGTCAGTTCCGCCA TCGACAGATTCGCCCAAGCCGGCATCCGGAAGACCTGGGTGTTCCAGGCCTTCGACGACGACCATGAAGTGCTGATCCTG CAGGAGTTCCCCGACGAGGACAGCGCGCGGGAGTGGATCGACCATCCCGACGCCGCGGCCCAATGGATGTCCGGGGCGGG CATCGGCGCCTACCCGCCCTTGTTCGTCGGCCGCTTCTTCGACATGATGCGCATCGGGGCGGACTGA
Upstream 100 bases:
>100_bases GTCGAGATCGGATGGCAGGATTCAAAGTGCCAAGGACCGTCGAGTTTCTCGACGCGTTGCCGCTCAACGCCACCGGGAAA GTCATGAAAGACCAACTCCG
Downstream 100 bases:
>100_bases GGATCCGCCGGTGTTCGTGTGCCTGTGCAACGGGGTCACCAGCCAGACCGTGACCGAGGCCGTGCAGTGCGGCGCGTCGA CCACCAACGAAGTCGCCCGG
Product: FadD16
Products: NA
Alternate protein names: FadD16 Protein
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MNNGDIHSMVIASDYRVPDPTRVWPLLERNKAALADIGAHHVLVYTSTHDYGRVLAMIGVHSREPIVELLRSRVFFDWFD EAGVDDIPAVFAGEIVDRFITQPPTNPRAPGVVVAAIASVNDVTLLTSEVSSAIDRFAQAGIRKTWVFQAFDDDHEVLIL QEFPDEDSAREWIDHPDAAAQWMSGAGIGAYPPLFVGRFFDMMRIGAD
Sequences:
>Translated_208_residues MNNGDIHSMVIASDYRVPDPTRVWPLLERNKAALADIGAHHVLVYTSTHDYGRVLAMIGVHSREPIVELLRSRVFFDWFD EAGVDDIPAVFAGEIVDRFITQPPTNPRAPGVVVAAIASVNDVTLLTSEVSSAIDRFAQAGIRKTWVFQAFDDDHEVLIL QEFPDEDSAREWIDHPDAAAQWMSGAGIGAYPPLFVGRFFDMMRIGAD >Mature_208_residues MNNGDIHSMVIASDYRVPDPTRVWPLLERNKAALADIGAHHVLVYTSTHDYGRVLAMIGVHSREPIVELLRSRVFFDWFD EAGVDDIPAVFAGEIVDRFITQPPTNPRAPGVVVAAIASVNDVTLLTSEVSSAIDRFAQAGIRKTWVFQAFDDDHEVLIL QEFPDEDSAREWIDHPDAAAQWMSGAGIGAYPPLFVGRFFDMMRIGAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23091; Mature: 23091
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNGDIHSMVIASDYRVPDPTRVWPLLERNKAALADIGAHHVLVYTSTHDYGRVLAMIGV CCCCCEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHCCCCEEEEEECCCCHHHHHHHHCC HSREPIVELLRSRVFFDWFDEAGVDDIPAVFAGEIVDRFITQPPTNPRAPGVVVAAIASV CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHCC NDVTLLTSEVSSAIDRFAQAGIRKTWVFQAFDDDHEVLILQEFPDEDSAREWIDHPDAAA CCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHCCCHHHH QWMSGAGIGAYPPLFVGRFFDMMRIGAD HHHCCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MNNGDIHSMVIASDYRVPDPTRVWPLLERNKAALADIGAHHVLVYTSTHDYGRVLAMIGV CCCCCEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHCCCCEEEEEECCCCHHHHHHHHCC HSREPIVELLRSRVFFDWFDEAGVDDIPAVFAGEIVDRFITQPPTNPRAPGVVVAAIASV CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHCC NDVTLLTSEVSSAIDRFAQAGIRKTWVFQAFDDDHEVLILQEFPDEDSAREWIDHPDAAA CCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHCCCHHHH QWMSGAGIGAYPPLFVGRFFDMMRIGAD HHHCCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA