Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is cynS
Identifier: 161611200
GI number: 161611200
Start: 4572815
End: 4573270
Strand: Direct
Name: cynS
Synonym: MAP4098
Alternate gene names: 161611200
Gene position: 4572815-4573270 (Clockwise)
Preceding gene: 41410195
Following gene: 41410197
Centisome position: 94.68
GC content: 66.23
Gene sequence:
>456_bases ATGACGAGAAACCAACTCACCGAACAGATCGTCGTCGCGCGGCTGGCCAAGGGGCTGACCTGGCAGGAGCTGGCCGACGC CATCGGCCGCCCGCTGCTGTGGACCACCTCGGCGCTGCTCGGACAGCACCCGATACCGGCCGAGCTGGGTCGGATCCTCG TCGACAAGCTGGGCCTCGACGAGTCGGCGGTGCCGGTGCTGGCGGCGCCGCCGATGCGCGGCGGCCTGCCCACCGCCGTG CCGACCGACCCCACCATCTACCGCTTCTACGAAGCCCTGCAGGTCTACGGCGGCGCCCTCAAAGAGGTGATCGCCGAGCA GTTCGGCGACGGCATCATGAGCGCGATCAACTTCAGTGTCGATCTGCAGAAGAAACCACACCCGTCCGGAGACCGGGTGG TGGTCACCTTCGACGGGAAATTCCTTCCCTACCAATGGGTTTCATCGGAGCAGTAG
Upstream 100 bases:
>100_bases CCGCCACGAAACCCGAATAGTCAGAACAGCAGCGGGTCAAGTGGCTCGGCCATGGAACGGATTATGGCTACCCCCCGACG CGGCGTGCATGCTGGGACGC
Downstream 100 bases:
>100_bases GTGACGTCCAAGACGGAGCCGGCGAAGCCGGTGGACCTAGTGCTCTCCGGCGGCGTCAAGTTCATCGGTCTGGTGGGCGC CATCGTGGCGCTGATGGATG
Product: cyanate hydratase
Products: NA
Alternate protein names: Cyanase; Cyanate hydrolase; Cyanate lyase
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MTRNQLTEQIVVARLAKGLTWQELADAIGRPLLWTTSALLGQHPIPAELGRILVDKLGLDESAVPVLAAPPMRGGLPTAV PTDPTIYRFYEALQVYGGALKEVIAEQFGDGIMSAINFSVDLQKKPHPSGDRVVVTFDGKFLPYQWVSSEQ
Sequences:
>Translated_151_residues MTRNQLTEQIVVARLAKGLTWQELADAIGRPLLWTTSALLGQHPIPAELGRILVDKLGLDESAVPVLAAPPMRGGLPTAV PTDPTIYRFYEALQVYGGALKEVIAEQFGDGIMSAINFSVDLQKKPHPSGDRVVVTFDGKFLPYQWVSSEQ >Mature_150_residues TRNQLTEQIVVARLAKGLTWQELADAIGRPLLWTTSALLGQHPIPAELGRILVDKLGLDESAVPVLAAPPMRGGLPTAVP TDPTIYRFYEALQVYGGALKEVIAEQFGDGIMSAINFSVDLQKKPHPSGDRVVVTFDGKFLPYQWVSSEQ
Specific function: Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
COG id: COG1513
COG function: function code P; Cyanate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cyanase family
Homologues:
Organism=Escherichia coli, GI1786535, Length=144, Percent_Identity=46.5277777777778, Blast_Score=140, Evalue=3e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CYNS_MYCA1 (A0QL81)
Other databases:
- EMBL: CP000479 - RefSeq: YP_883669.1 - ProteinModelPortal: A0QL81 - SMR: A0QL81 - STRING: A0QL81 - EnsemblBacteria: EBMYCT00000013133 - GeneID: 4527174 - GenomeReviews: CP000479_GR - KEGG: mav:MAV_4538 - TIGR: MAV_4538 - eggNOG: COG1513 - GeneTree: EBGT00050000017609 - HOGENOM: HBG317643 - OMA: SAIDFDM - ProtClustDB: PRK02866 - BioCyc: MAVI243243:MAV_4538-MONOMER - HAMAP: MF_00535 - InterPro: IPR008076 - InterPro: IPR003712 - InterPro: IPR010982 - Gene3D: G3DSA:3.30.1160.10 - PIRSF: PIRSF001263 - PRINTS: PR01693 - TIGRFAMs: TIGR00673
Pfam domain/function: PF02560 Cyanate_lyase; SSF55234 Cyanate_lyase_C; SSF47413 Lambda_like_DNA
EC number: =4.2.1.104
Molecular weight: Translated: 16483; Mature: 16352
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: ACT_SITE 92-92 ACT_SITE 95-95 ACT_SITE 118-118
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRNQLTEQIVVARLAKGLTWQELADAIGRPLLWTTSALLGQHPIPAELGRILVDKLGLD CCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCC ESAVPVLAAPPMRGGLPTAVPTDPTIYRFYEALQVYGGALKEVIAEQFGDGIMSAINFSV CCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCE DLQKKPHPSGDRVVVTFDGKFLPYQWVSSEQ ECCCCCCCCCCEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure TRNQLTEQIVVARLAKGLTWQELADAIGRPLLWTTSALLGQHPIPAELGRILVDKLGLD CHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCC ESAVPVLAAPPMRGGLPTAVPTDPTIYRFYEALQVYGGALKEVIAEQFGDGIMSAINFSV CCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCE DLQKKPHPSGDRVVVTFDGKFLPYQWVSSEQ ECCCCCCCCCCEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA