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The map label for this gene is petC [H]

Identifier: 52842909

GI number: 52842909

Start: 3056079

End: 3056819

Strand: Reverse

Name: petC [H]

Synonym: lpg2703

Alternate gene names: 52842909

Gene position: 3056819-3056079 (Counterclockwise)

Preceding gene: 52842910

Following gene: 52842908

Centisome position: 89.97

GC content: 34.82

Gene sequence:

>741_bases
ATGATGAAAATAAAGGTGTTATTAGTTGCTGCATTGGCATTTTTAATGTCAAACGCTGCTTTTACAGAAAATTTAACAAT
GGATTATGTACCGGTTGATATAAACGATAAAGAGAGTTTGCAAAGAGGGGCAAAGATGTTTATGAATTATTGCTCAGGAT
GCCATTCTCTCAAATACATGCGTTATAACCGCATGGCTCAGGATCTTGGATTAACTACTTTTGATGGTCAGATTGCTGAA
GATTTATTAAAAAATAACTTAATTTTTACTCAGGCCAATATTTATGATCCCATTCAAATAGCTATGTCACCTGAAGATGC
CAAGCAATGGTTTGGTATGGTGCCTCCTGATTTGTCTTTAAGTGCGCGAGATAGAGGGCCTGTTTGGATATATAATTATT
TGAAAAGTTTTTACAGCGACCCTTCCAGACCTTTTGGTGCTAATAATTTACTAATGCCTGATGTTGCTATGCCTAATGTT
TTGGAACCCTTGATTGGAAAAGTCATTTTAGTCAAAGATAAAAATTCGCATGCAAATAGTTTATTAGTGGTAAAACGAGG
TGAGATGTTTGAAGGCCAGTTTGACAGCGCATTAAGGGATTTAGTCAATTTTTTGGTTTATGTAGGTGAGCCTGCCAAGC
TAATTCGTTATAAATTAGGAGTTTTTGTTCTTTTGTTCTTCTGTATTTTCCTTATAGCAGCTTATTCACTGAAGAAAGCT
TATTGGAAACAATTAAAATAG

Upstream 100 bases:

>100_bases
CTCGAATTGCCGCTGTTATTTATTTTTCTTACTTTATCTTGATGCCTATTTATAGTCGTTTTGAGAAAACCCGGCCAGTA
CCTACACGGATAGGTGAAAA

Downstream 100 bases:

>100_bases
GAATAGGCTGCTTACTCCTCAGTTTTGTAAAAAGTACTACATTTTTGCCTTTTATACAGAGTTCAATCTCAAATGGTTGT
CTTCAGAATCAGAAAATATA

Product: ubiquinol-cytochrome c reductase, cytochrome c1

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MMKIKVLLVAALAFLMSNAAFTENLTMDYVPVDINDKESLQRGAKMFMNYCSGCHSLKYMRYNRMAQDLGLTTFDGQIAE
DLLKNNLIFTQANIYDPIQIAMSPEDAKQWFGMVPPDLSLSARDRGPVWIYNYLKSFYSDPSRPFGANNLLMPDVAMPNV
LEPLIGKVILVKDKNSHANSLLVVKRGEMFEGQFDSALRDLVNFLVYVGEPAKLIRYKLGVFVLLFFCIFLIAAYSLKKA
YWKQLK

Sequences:

>Translated_246_residues
MMKIKVLLVAALAFLMSNAAFTENLTMDYVPVDINDKESLQRGAKMFMNYCSGCHSLKYMRYNRMAQDLGLTTFDGQIAE
DLLKNNLIFTQANIYDPIQIAMSPEDAKQWFGMVPPDLSLSARDRGPVWIYNYLKSFYSDPSRPFGANNLLMPDVAMPNV
LEPLIGKVILVKDKNSHANSLLVVKRGEMFEGQFDSALRDLVNFLVYVGEPAKLIRYKLGVFVLLFFCIFLIAAYSLKKA
YWKQLK
>Mature_246_residues
MMKIKVLLVAALAFLMSNAAFTENLTMDYVPVDINDKESLQRGAKMFMNYCSGCHSLKYMRYNRMAQDLGLTTFDGQIAE
DLLKNNLIFTQANIYDPIQIAMSPEDAKQWFGMVPPDLSLSARDRGPVWIYNYLKSFYSDPSRPFGANNLLMPDVAMPNV
LEPLIGKVILVKDKNSHANSLLVVKRGEMFEGQFDSALRDLVNFLVYVGEPAKLIRYKLGVFVLLFFCIFLIAAYSLKKA
YWKQLK

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056 [H]

Pfam domain/function: PF02167 Cytochrom_C1 [H]

EC number: 1.10.2.2

Molecular weight: Translated: 28014; Mature: 28014

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKIKVLLVAALAFLMSNAAFTENLTMDYVPVDINDKESLQRGAKMFMNYCSGCHSLKYM
CEEHHHHHHHHHHHHHHCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RYNRMAQDLGLTTFDGQIAEDLLKNNLIFTQANIYDPIQIAMSPEDAKQWFGMVPPDLSL
HHHHHHHHCCCCCCCHHHHHHHHHCCEEEEECCCCCCEEEEECCHHHHHHCCCCCCCCCC
SARDRGPVWIYNYLKSFYSDPSRPFGANNLLMPDVAMPNVLEPLIGKVILVKDKNSHANS
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCE
LLVVKRGEMFEGQFDSALRDLVNFLVYVGEPAKLIRYKLGVFVLLFFCIFLIAAYSLKKA
EEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YWKQLK
HHHHCC
>Mature Secondary Structure
MMKIKVLLVAALAFLMSNAAFTENLTMDYVPVDINDKESLQRGAKMFMNYCSGCHSLKYM
CEEHHHHHHHHHHHHHHCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RYNRMAQDLGLTTFDGQIAEDLLKNNLIFTQANIYDPIQIAMSPEDAKQWFGMVPPDLSL
HHHHHHHHCCCCCCCHHHHHHHHHCCEEEEECCCCCCEEEEECCHHHHHHCCCCCCCCCC
SARDRGPVWIYNYLKSFYSDPSRPFGANNLLMPDVAMPNVLEPLIGKVILVKDKNSHANS
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCE
LLVVKRGEMFEGQFDSALRDLVNFLVYVGEPAKLIRYKLGVFVLLFFCIFLIAAYSLKKA
EEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YWKQLK
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA