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The map label for this gene is lphB

Identifier: 52842896

GI number: 52842896

Start: 3040006

End: 3041637

Strand: Reverse

Name: lphB

Synonym: lpg2690

Alternate gene names: NA

Gene position: 3041637-3040006 (Counterclockwise)

Preceding gene: 52842899

Following gene: 52842893

Centisome position: 89.52

GC content: 36.27

Gene sequence:

>1632_bases
TTGCGTGCCCTCCTATTGCCAAGAAGAAAAACCATTCTCGTGCTATTGATAGCCATTTATTGCGCTTACGACCTGATGGT
TGCATTGTATACAGCTTGGGATTTCACAACGGATGATGCTTATATCAGCTGGTATTATGCGCGACAGTTAGCGAGTGGGA
AAGGACTATTGTGGCATGCGACTCTGCCTCCAGTAGAGGGGTATTCCAATTTTTTATGGATCATCATTGCTGCATCGGTC
ATTAAATTGCAATTACCTCTGGTTAGCAGTATGAAGGTTATTTCCTGTTGTAGCTTGGGATTGTCATTACTGTTTTTATA
TCGATTGGCAAGACTTTTTTGTAGCCCTCTATTATCCATATTACCCGTTTTTTTATTTAGCCATTATACAGGAGTGGCTT
GGTGGACGGTCAGTGGATTGGAAACCTTATTTTACTGTGCCCTATCTTTGGCATTGATATGGCAATGTACCTTGGCATTC
GGTTATCACACTGTTAATGACAGTCACTGGATCAATCGATTTTCCCTTGACTCAACCAATCATTGGATAATAACCAATGT
GCTCTTGTTATTATTGAGCTTAACACGATTTGAGGGAATCATTTGGATAATTCCTTTGGCTGTTTTTATAGGATGTCAAT
ATTTGAGAGATCACAGGGAGCTGGTTTTTAAAGATCATAAGAGATTGTTCTTATGGGTTTCAATTACTTTTGTTTGCTTT
ACATTACCTTATCTTGTGTATTTTATTTGGAGATTAATTTATTTCGGTCATTGGATTCCTAATAGCTATCGTTGCAAAGC
GTTAGCTTATGGGCAGTTTTTGGCAGTAGATTTGGATTATTTTCTTTTTATAACACCTTTACTTATATTATCGGTACCCT
ATTTATTATCTGCTAAGAAAGATTGTCGCCATTCTTTACTTTGGTTGCCCTCTGTTTTGTATAGTCTGTTGCTTTGGAAA
GCAAATCCTGTGGTTACCTATGGTTTAAGATTGTTTTTAAGTCCATTCGCTCTTTTTTCCATATTACCTGTTTTAGGACT
TAATCAATTTATACAATATTTTAAACCCTTTAGATGGGATCCTGAATATCCAATTGCGGGATTAATGTTGTTTATTACCT
GGTTTTTTGTGCCGGGGAATGATTTAAACCATTTATCAAAATCAGTTATAGAATATAATGAACGTGCTCAAAATAGAATG
ACTATTGCTGATTTACTCAACCGGAAAGCAAAAAAGGGCGACAGCGTTCTGTTAGATGATTGTGGGATTATTCCGTTTTT
TTCTCGAGAAGACATTCGATTCATAGACGCGCAATGTTTGAATAATAGCGATTTAACCCAAAAACCATTTAAAAACGATT
TAAGTCTTTACGCCGATTATCTCAATTCTAAAGTGAGGCCTGACTGGGTAATTACCAATTACTATCCTATGGAATCACAT
GGTGATTATTTGACAGATTTGTTAGATGCGAAAAATTTTTTTAAAAACTATCATTTAGCTAGTACATTAAGCTCGGGCTT
TTATTTAAACCAAAATCAACCGCAAGGGAAAAAGATGATTGATTTTGTTTATCAAATTTTTAAGCGGGCGTACAATAAGC
CCCTGGAATTAGAATCCCAGGAGCCAAAGTGA

Upstream 100 bases:

>100_bases
CCCATTATTTTTTTTGCATCTTGATTTTAGAGCTTGTTGATATTTTGTGATATTGCTATTGTGAATTGGGTTATAAATAA
TTTTTGGAGCAGAACACATT

Downstream 100 bases:

>100_bases
TGACCATTATTGCTCAGAAGGAGAGCCTTGACTTGAAAAATCAGCAGTGGGTTGAGCGGCTTTTAAATTTTGCAATAGCA
TAATGCTATTGGTTAATAAT

Product: LphB

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 543; Mature: 543

Protein sequence:

>543_residues
MRALLLPRRKTILVLLIAIYCAYDLMVALYTAWDFTTDDAYISWYYARQLASGKGLLWHATLPPVEGYSNFLWIIIAASV
IKLQLPLVSSMKVISCCSLGLSLLFLYRLARLFCSPLLSILPVFLFSHYTGVAWWTVSGLETLFYCALSLALIWQCTLAF
GYHTVNDSHWINRFSLDSTNHWIITNVLLLLLSLTRFEGIIWIIPLAVFIGCQYLRDHRELVFKDHKRLFLWVSITFVCF
TLPYLVYFIWRLIYFGHWIPNSYRCKALAYGQFLAVDLDYFLFITPLLILSVPYLLSAKKDCRHSLLWLPSVLYSLLLWK
ANPVVTYGLRLFLSPFALFSILPVLGLNQFIQYFKPFRWDPEYPIAGLMLFITWFFVPGNDLNHLSKSVIEYNERAQNRM
TIADLLNRKAKKGDSVLLDDCGIIPFFSREDIRFIDAQCLNNSDLTQKPFKNDLSLYADYLNSKVRPDWVITNYYPMESH
GDYLTDLLDAKNFFKNYHLASTLSSGFYLNQNQPQGKKMIDFVYQIFKRAYNKPLELESQEPK

Sequences:

>Translated_543_residues
MRALLLPRRKTILVLLIAIYCAYDLMVALYTAWDFTTDDAYISWYYARQLASGKGLLWHATLPPVEGYSNFLWIIIAASV
IKLQLPLVSSMKVISCCSLGLSLLFLYRLARLFCSPLLSILPVFLFSHYTGVAWWTVSGLETLFYCALSLALIWQCTLAF
GYHTVNDSHWINRFSLDSTNHWIITNVLLLLLSLTRFEGIIWIIPLAVFIGCQYLRDHRELVFKDHKRLFLWVSITFVCF
TLPYLVYFIWRLIYFGHWIPNSYRCKALAYGQFLAVDLDYFLFITPLLILSVPYLLSAKKDCRHSLLWLPSVLYSLLLWK
ANPVVTYGLRLFLSPFALFSILPVLGLNQFIQYFKPFRWDPEYPIAGLMLFITWFFVPGNDLNHLSKSVIEYNERAQNRM
TIADLLNRKAKKGDSVLLDDCGIIPFFSREDIRFIDAQCLNNSDLTQKPFKNDLSLYADYLNSKVRPDWVITNYYPMESH
GDYLTDLLDAKNFFKNYHLASTLSSGFYLNQNQPQGKKMIDFVYQIFKRAYNKPLELESQEPK
>Mature_543_residues
MRALLLPRRKTILVLLIAIYCAYDLMVALYTAWDFTTDDAYISWYYARQLASGKGLLWHATLPPVEGYSNFLWIIIAASV
IKLQLPLVSSMKVISCCSLGLSLLFLYRLARLFCSPLLSILPVFLFSHYTGVAWWTVSGLETLFYCALSLALIWQCTLAF
GYHTVNDSHWINRFSLDSTNHWIITNVLLLLLSLTRFEGIIWIIPLAVFIGCQYLRDHRELVFKDHKRLFLWVSITFVCF
TLPYLVYFIWRLIYFGHWIPNSYRCKALAYGQFLAVDLDYFLFITPLLILSVPYLLSAKKDCRHSLLWLPSVLYSLLLWK
ANPVVTYGLRLFLSPFALFSILPVLGLNQFIQYFKPFRWDPEYPIAGLMLFITWFFVPGNDLNHLSKSVIEYNERAQNRM
TIADLLNRKAKKGDSVLLDDCGIIPFFSREDIRFIDAQCLNNSDLTQKPFKNDLSLYADYLNSKVRPDWVITNYYPMESH
GDYLTDLLDAKNFFKNYHLASTLSSGFYLNQNQPQGKKMIDFVYQIFKRAYNKPLELESQEPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63298; Mature: 63298

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALLLPRRKTILVLLIAIYCAYDLMVALYTAWDFTTDDAYISWYYARQLASGKGLLWHA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEE
TLPPVEGYSNFLWIIIAASVIKLQLPLVSSMKVISCCSLGLSLLFLYRLARLFCSPLLSI
CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPVFLFSHYTGVAWWTVSGLETLFYCALSLALIWQCTLAFGYHTVNDSHWINRFSLDSTN
HHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCEEEECCCCC
HWIITNVLLLLLSLTRFEGIIWIIPLAVFIGCQYLRDHRELVFKDHKRLFLWVSITFVCF
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHH
TLPYLVYFIWRLIYFGHWIPNSYRCKALAYGQFLAVDLDYFLFITPLLILSVPYLLSAKK
HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH
DCRHSLLWLPSVLYSLLLWKANPVVTYGLRLFLSPFALFSILPVLGLNQFIQYFKPFRWD
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PEYPIAGLMLFITWFFVPGNDLNHLSKSVIEYNERAQNRMTIADLLNRKAKKGDSVLLDD
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
CGIIPFFSREDIRFIDAQCLNNSDLTQKPFKNDLSLYADYLNSKVRPDWVITNYYPMESH
CCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
GDYLTDLLDAKNFFKNYHLASTLSSGFYLNQNQPQGKKMIDFVYQIFKRAYNKPLELESQ
CHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
EPK
CCC
>Mature Secondary Structure
MRALLLPRRKTILVLLIAIYCAYDLMVALYTAWDFTTDDAYISWYYARQLASGKGLLWHA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEE
TLPPVEGYSNFLWIIIAASVIKLQLPLVSSMKVISCCSLGLSLLFLYRLARLFCSPLLSI
CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPVFLFSHYTGVAWWTVSGLETLFYCALSLALIWQCTLAFGYHTVNDSHWINRFSLDSTN
HHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCEEEECCCCC
HWIITNVLLLLLSLTRFEGIIWIIPLAVFIGCQYLRDHRELVFKDHKRLFLWVSITFVCF
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHH
TLPYLVYFIWRLIYFGHWIPNSYRCKALAYGQFLAVDLDYFLFITPLLILSVPYLLSAKK
HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH
DCRHSLLWLPSVLYSLLLWKANPVVTYGLRLFLSPFALFSILPVLGLNQFIQYFKPFRWD
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PEYPIAGLMLFITWFFVPGNDLNHLSKSVIEYNERAQNRMTIADLLNRKAKKGDSVLLDD
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
CGIIPFFSREDIRFIDAQCLNNSDLTQKPFKNDLSLYADYLNSKVRPDWVITNYYPMESH
CCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
GDYLTDLLDAKNFFKNYHLASTLSSGFYLNQNQPQGKKMIDFVYQIFKRAYNKPLELESQ
CHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
EPK
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA