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The map label for this gene is 52842866

Identifier: 52842866

GI number: 52842866

Start: 3007840

End: 3008502

Strand: Reverse

Name: 52842866

Synonym: lpg2660

Alternate gene names: NA

Gene position: 3008502-3007840 (Counterclockwise)

Preceding gene: 52842870

Following gene: 52842865

Centisome position: 88.54

GC content: 42.38

Gene sequence:

>663_bases
ATGCTATTTACCGACAAATTAAATACTCCCGGAGAGCATGAATTAATGCTTGAAGGATTAGTTGGCCCACTGGAAACCGT
ACTGACTGTTCCTGAAGATGCGGATACTCGCTATGTTGCTTTTCTTGGTCATCCACATTCTTTACAAGGTGGGACAATGA
ATAACAAAGTAGTTACCACGATGGCCAGAGTTTTTAAGGAATTGCATATTCCTTCAGTACGGTTTAATTTCAGAGGTGTA
GGGCAGTCTGGAGGCCATTATGATAATGGTATTGGCGAGAGTGAAGATATGCGCAAGCTCGTGAGGCAGTGGCATTCTGA
GCAACCGCAAGCCCAAAATATTTTTGCGGGCTTTTCTTTCGGATCTTATGTGGCTTATAGAACGGCGTCTCATTGTGAGC
ATGCTCTGTTAATAACGATAGCTCCTCCTGTGCATCATTATGATTACAAAGAATTTGAGCCACCTCCTCATCCCTGGCTT
ATTATACAAGGCAAAGAAGATGAGGTTGTGCCATTTGAACTGGTGAGTGAGTTCGCCAGCCAATCATCGCAGGTATTGCC
AGTCATTGAATTTGTTGAAACGGGTCATTTTTTTCATGGTAAGCTTTTAATATTAAAAGAAAAACTGATGGATGCTGTTC
GTGATCAGGTTTGCCTGTCATGA

Upstream 100 bases:

>100_bases
GGTCTATTGGGGGTCAACGCATCCATTGCTATAATAGCCTAACTCTTTTGCTTAAATCCATATTGATTTAGGTTATTATC
TTTAAATTGGCAGGGTTGTT

Downstream 100 bases:

>100_bases
GTTTGATTGAGCAGTATGAAGCCGCGATTTATAGAGGTGAAATAGATAGCGATCCTGAGCAGAGAGAAATCCTTGAACAC
ATGCAGAGGCTTGCTGAGGA

Product: transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MLFTDKLNTPGEHELMLEGLVGPLETVLTVPEDADTRYVAFLGHPHSLQGGTMNNKVVTTMARVFKELHIPSVRFNFRGV
GQSGGHYDNGIGESEDMRKLVRQWHSEQPQAQNIFAGFSFGSYVAYRTASHCEHALLITIAPPVHHYDYKEFEPPPHPWL
IIQGKEDEVVPFELVSEFASQSSQVLPVIEFVETGHFFHGKLLILKEKLMDAVRDQVCLS

Sequences:

>Translated_220_residues
MLFTDKLNTPGEHELMLEGLVGPLETVLTVPEDADTRYVAFLGHPHSLQGGTMNNKVVTTMARVFKELHIPSVRFNFRGV
GQSGGHYDNGIGESEDMRKLVRQWHSEQPQAQNIFAGFSFGSYVAYRTASHCEHALLITIAPPVHHYDYKEFEPPPHPWL
IIQGKEDEVVPFELVSEFASQSSQVLPVIEFVETGHFFHGKLLILKEKLMDAVRDQVCLS
>Mature_220_residues
MLFTDKLNTPGEHELMLEGLVGPLETVLTVPEDADTRYVAFLGHPHSLQGGTMNNKVVTTMARVFKELHIPSVRFNFRGV
GQSGGHYDNGIGESEDMRKLVRQWHSEQPQAQNIFAGFSFGSYVAYRTASHCEHALLITIAPPVHHYDYKEFEPPPHPWL
IIQGKEDEVVPFELVSEFASQSSQVLPVIEFVETGHFFHGKLLILKEKLMDAVRDQVCLS

Specific function: Unknown

COG id: COG2945

COG function: function code R; Predicted hydrolase of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000383 [H]

Pfam domain/function: PF02129 Peptidase_S15 [H]

EC number: NA

Molecular weight: Translated: 24798; Mature: 24798

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFTDKLNTPGEHELMLEGLVGPLETVLTVPEDADTRYVAFLGHPHSLQGGTMNNKVVTT
CEECCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCEEEEECCCCCCCCCCCCCHHHHH
MARVFKELHIPSVRFNFRGVGQSGGHYDNGIGESEDMRKLVRQWHSEQPQAQNIFAGFSF
HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHEEEECCC
GSYVAYRTASHCEHALLITIAPPVHHYDYKEFEPPPHPWLIIQGKEDEVVPFELVSEFAS
HHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH
QSSQVLPVIEFVETGHFFHGKLLILKEKLMDAVRDQVCLS
CCCCCCHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLFTDKLNTPGEHELMLEGLVGPLETVLTVPEDADTRYVAFLGHPHSLQGGTMNNKVVTT
CEECCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCEEEEECCCCCCCCCCCCCHHHHH
MARVFKELHIPSVRFNFRGVGQSGGHYDNGIGESEDMRKLVRQWHSEQPQAQNIFAGFSF
HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHEEEECCC
GSYVAYRTASHCEHALLITIAPPVHHYDYKEFEPPPHPWLIIQGKEDEVVPFELVSEFAS
HHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH
QSSQVLPVIEFVETGHFFHGKLLILKEKLMDAVRDQVCLS
CCCCCCHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]