Click here to switch to the map view.

The map label for this gene is zipA [H]

Identifier: 52842825

GI number: 52842825

Start: 2956480

End: 2957259

Strand: Reverse

Name: zipA [H]

Synonym: lpg2619

Alternate gene names: 52842825

Gene position: 2957259-2956480 (Counterclockwise)

Preceding gene: 52842826

Following gene: 52842824

Centisome position: 87.04

GC content: 39.87

Gene sequence:

>780_bases
ATGCAGGCAAATTGGAGCTTAATTCTTAATGTCCTGTTGTTAATTGGCGTTCTAGTGGCTATTGGCCGTTTAATGAAGAC
TAGAAGACAGAGCTTAAATCAAGAACACTATCAACCTTCTCTTGGCCAAGTAGAAAATAACTCCTATGGCTCTCAATCAT
ATAATGATGAAATTATCGCTGTGCGGAAGGTCAATAGGGAGGTTCCTTTGGATTTTGAAAATTTTGATGGTTCTGAAAAG
CGACAAGCAATAAGGAAGCCCTCTGTAAAAACAGAACAACCTCAGTTGATTCCCGAGGAAGAAGAGTGCGAATTAAATGA
AAGAACAGAACCTAATAGTGACTGTTCTTCTTCCACCGCCATGGTGTTTTTGTTGGCCAAGGAAAATCGACAATTTGCCG
GTTATGAATTATTGCAAACTGTTTTGGCTGCTGGTTTGAGATTTGGAGAGAGGCACTTGTTTCATAGACATCAATTCACG
AATGGACAAGGTCCAGTGCTTTGCAGTTTAGCTGCAGCTACAGCAACCGGTGTTTTTGATTTACAGAATATCGGTGCTTT
CAGTGTAAGAGGATTATGTCTGTTCATGCAAATATCAAATAATCCTGAGATTAATGCAGAACGGTTTTCTGTTATGTTAG
ATACTGCAAAACAATTAAGTGAGGGTCTCGACGCTTATTTGCTGGATGACCAGCGCAAACCTCTAACGGAGGAGCGTATC
GCACGATATCATCGATACTTGAAAATTGAGCATTTGATGGATGATTGTGTAACAAACTAA

Upstream 100 bases:

>100_bases
GAATTGGCTGAACATTTAGTTGGGGTGACCATGCGTGAGCCGGGAGTGTCTCGTTTGGTTGCGGTTGATGTGAAACAAGC
TTTGACTATGGAGTAAACTT

Downstream 100 bases:

>100_bases
TGCCCATAGGCTAGAATCATTGCACTATCTAGCGGTTATATTTTCAGGATAGGGCTTCGCACCAGGCGAAGCTCATTATC
TACTCTGTTAATGGTTAATG

Product: cell division protein ZipA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MQANWSLILNVLLLIGVLVAIGRLMKTRRQSLNQEHYQPSLGQVENNSYGSQSYNDEIIAVRKVNREVPLDFENFDGSEK
RQAIRKPSVKTEQPQLIPEEEECELNERTEPNSDCSSSTAMVFLLAKENRQFAGYELLQTVLAAGLRFGERHLFHRHQFT
NGQGPVLCSLAAATATGVFDLQNIGAFSVRGLCLFMQISNNPEINAERFSVMLDTAKQLSEGLDAYLLDDQRKPLTEERI
ARYHRYLKIEHLMDDCVTN

Sequences:

>Translated_259_residues
MQANWSLILNVLLLIGVLVAIGRLMKTRRQSLNQEHYQPSLGQVENNSYGSQSYNDEIIAVRKVNREVPLDFENFDGSEK
RQAIRKPSVKTEQPQLIPEEEECELNERTEPNSDCSSSTAMVFLLAKENRQFAGYELLQTVLAAGLRFGERHLFHRHQFT
NGQGPVLCSLAAATATGVFDLQNIGAFSVRGLCLFMQISNNPEINAERFSVMLDTAKQLSEGLDAYLLDDQRKPLTEERI
ARYHRYLKIEHLMDDCVTN
>Mature_259_residues
MQANWSLILNVLLLIGVLVAIGRLMKTRRQSLNQEHYQPSLGQVENNSYGSQSYNDEIIAVRKVNREVPLDFENFDGSEK
RQAIRKPSVKTEQPQLIPEEEECELNERTEPNSDCSSSTAMVFLLAKENRQFAGYELLQTVLAAGLRFGERHLFHRHQFT
NGQGPVLCSLAAATATGVFDLQNIGAFSVRGLCLFMQISNNPEINAERFSVMLDTAKQLSEGLDAYLLDDQRKPLTEERI
ARYHRYLKIEHLMDDCVTN

Specific function: Interacts directly with the cell division protein FtsZ. Probable receptor for the septal ring structure, may anchor it to the inner-membrane [H]

COG id: COG3115

COG function: function code D; Cell division protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type I membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ZipA family [H]

Homologues:

Organism=Escherichia coli, GI1788752, Length=163, Percent_Identity=25.7668711656442, Blast_Score=74, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011919
- InterPro:   IPR007449
- ProDom:   PD035754 [H]

Pfam domain/function: PF04354 ZipA_C [H]

EC number: NA

Molecular weight: Translated: 29421; Mature: 29421

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQANWSLILNVLLLIGVLVAIGRLMKTRRQSLNQEHYQPSLGQVENNSYGSQSYNDEIIA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEE
VRKVNREVPLDFENFDGSEKRQAIRKPSVKTEQPQLIPEEEECELNERTEPNSDCSSSTA
EEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCE
MVFLLAKENRQFAGYELLQTVLAAGLRFGERHLFHRHQFTNGQGPVLCSLAAATATGVFD
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHCHHH
LQNIGAFSVRGLCLFMQISNNPEINAERFSVMLDTAKQLSEGLDAYLLDDQRKPLTEERI
HHHCCCHHHCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHH
ARYHRYLKIEHLMDDCVTN
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQANWSLILNVLLLIGVLVAIGRLMKTRRQSLNQEHYQPSLGQVENNSYGSQSYNDEIIA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEE
VRKVNREVPLDFENFDGSEKRQAIRKPSVKTEQPQLIPEEEECELNERTEPNSDCSSSTA
EEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCE
MVFLLAKENRQFAGYELLQTVLAAGLRFGERHLFHRHQFTNGQGPVLCSLAAATATGVFD
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHCHHH
LQNIGAFSVRGLCLFMQISNNPEINAERFSVMLDTAKQLSEGLDAYLLDDQRKPLTEERI
HHHCCCHHHCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHH
ARYHRYLKIEHLMDDCVTN
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA