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The map label for this gene is 52842778

Identifier: 52842778

GI number: 52842778

Start: 2902489

End: 2903049

Strand: Reverse

Name: 52842778

Synonym: lpg2571

Alternate gene names: NA

Gene position: 2903049-2902489 (Counterclockwise)

Preceding gene: 52842779

Following gene: 52842777

Centisome position: 85.44

GC content: 27.99

Gene sequence:

>561_bases
ATGGACCCAGTATTAGAATATTATCAAAGAATAATCTTTAGAAATCAGCAAATTGAAAAACACATCCCTAATAATTTTAG
AAAAATTATAGAGGCAAAAAGCAAACAAGAAGTGGAAGCAATTATAAAAAATATCATTATACAAGAGGATGAATTTTCAA
ATTTTATAATTAACTGTGGCCTACTAGGTCTCTATTGGCAAAAAAAGCATAACACTTTTCTTTCAAAAGAAGATAAAGTG
AGCGATGAGGAAAAAGACCTTTTTTCTACCAGCAATGATTCTCAGCTTAAAAGAAAAATTTTTAGAAAAATGATAGCAGA
ACATGATAAAAAGAAATACATTTCTGTGCATGCTTTTTATAATTTGGATAAATCCAAATGGCATATATTTTACTTTGATT
TTAAAGATATAGAAAAAATTGAAAATCATCATGGCTTGCCACACCTGCATTATATATCCTATCTTTGGGGAAATAATTTT
AAGCTAGATGACGTATGGAAAATGTTCAATCAAAGAAAAGTTTCTTTACCAAAAATTCATATAAGGTGGGAACGTCATTA
A

Upstream 100 bases:

>100_bases
CTTTCTAGAACAAGCAGAAAAAGATATGAACGTTTTATTTGCTCAGTAATTGAATTATTGATCCCAAAACTCATATAAGG
TAGGCAGGAAATTACATAAT

Downstream 100 bases:

>100_bases
TAAGTGTAAAAGGCTTGTATAGGAATCCTGAAATAAGGTAGGCAATATTTAAAATATCCCGAAAACCCATGTTTTTGGGG
CACTTTCAGAGTTCGAACGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MDPVLEYYQRIIFRNQQIEKHIPNNFRKIIEAKSKQEVEAIIKNIIIQEDEFSNFIINCGLLGLYWQKKHNTFLSKEDKV
SDEEKDLFSTSNDSQLKRKIFRKMIAEHDKKKYISVHAFYNLDKSKWHIFYFDFKDIEKIENHHGLPHLHYISYLWGNNF
KLDDVWKMFNQRKVSLPKIHIRWERH

Sequences:

>Translated_186_residues
MDPVLEYYQRIIFRNQQIEKHIPNNFRKIIEAKSKQEVEAIIKNIIIQEDEFSNFIINCGLLGLYWQKKHNTFLSKEDKV
SDEEKDLFSTSNDSQLKRKIFRKMIAEHDKKKYISVHAFYNLDKSKWHIFYFDFKDIEKIENHHGLPHLHYISYLWGNNF
KLDDVWKMFNQRKVSLPKIHIRWERH
>Mature_186_residues
MDPVLEYYQRIIFRNQQIEKHIPNNFRKIIEAKSKQEVEAIIKNIIIQEDEFSNFIINCGLLGLYWQKKHNTFLSKEDKV
SDEEKDLFSTSNDSQLKRKIFRKMIAEHDKKKYISVHAFYNLDKSKWHIFYFDFKDIEKIENHHGLPHLHYISYLWGNNF
KLDDVWKMFNQRKVSLPKIHIRWERH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22812; Mature: 22812

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPVLEYYQRIIFRNQQIEKHIPNNFRKIIEAKSKQEVEAIIKNIIIQEDEFSNFIINCG
CCHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHCC
LLGLYWQKKHNTFLSKEDKVSDEEKDLFSTSNDSQLKRKIFRKMIAEHDKKKYISVHAFY
HHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHEEEEEEEE
NLDKSKWHIFYFDFKDIEKIENHHGLPHLHYISYLWGNNFKLDDVWKMFNQRKVSLPKIH
ECCCCEEEEEEECHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEE
IRWERH
EEEECC
>Mature Secondary Structure
MDPVLEYYQRIIFRNQQIEKHIPNNFRKIIEAKSKQEVEAIIKNIIIQEDEFSNFIINCG
CCHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHCC
LLGLYWQKKHNTFLSKEDKVSDEEKDLFSTSNDSQLKRKIFRKMIAEHDKKKYISVHAFY
HHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHEEEEEEEE
NLDKSKWHIFYFDFKDIEKIENHHGLPHLHYISYLWGNNFKLDDVWKMFNQRKVSLPKIH
ECCCCEEEEEEECHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEE
IRWERH
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA