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The map label for this gene is ymfK [C]

Identifier: 52842770

GI number: 52842770

Start: 2896086

End: 2896763

Strand: Reverse

Name: ymfK [C]

Synonym: lpg2562

Alternate gene names: 52842770

Gene position: 2896763-2896086 (Counterclockwise)

Preceding gene: 52842775

Following gene: 52842769

Centisome position: 85.26

GC content: 38.94

Gene sequence:

>678_bases
ATGAGCATTAGAGAAAAGATTGGGAAACGTATTCATGAAGCGCGTAAAGCTAAAGGCTTAACCAGGCAGGCTTTAGCTGA
TTTAACCGATGATATAAAACCCTCTCGAATAAATAATTGGGAACACGGCACAAGGATGCCGGGACCCGAAGAAATTACGC
AGTTGGCGCAAGCTTTAGAAGTATCCCCATCTTTTCTCATGGGGTTATCCGATGAACGAGATGGTGATTTTGGCATAAAT
TCTAGAGTCGGGTCATTAATACCATTGCTCGACCACAAACAAGCTGGTGATCCGAAATATCATATTCAAAGAGTTAAAGA
AGAACCTTACGCTGAAAAAATAACTTTTTTACCTGTTAATCAAGACATAGCAAATCAATTAGATGAATATGCTTTTGCTT
TGAAAATGCTTGATGACAGCATGAGCCCGGAATTAAGAATCAATGACATACAAATAGTTGACCCTTCTATATCCCCCAAT
CCTGGTGATTTCGTTGTCGTCAAAATAAGTGGCAAAGATGATGTCATTATTTGTCAGTATAAAAAGATATCCTATACTTC
ATCTGAGTTTGAACTACTGACCTTGAATGATAACTGGCCCAATATTACTTTTAACGAAAGTGAGCAAGTCGAGATAGTGG
GGACGGTGATTCAAAATATTCGGACGTATCGTCGGTAG

Upstream 100 bases:

>100_bases
TAAATTACACGTTACGTGCAAATATTATTGAATATAACACCTTTCGTGTAACAATCAAGTATCAATCAGAGCTTTTTTCA
ATTTTGGTGAATTTATTGTA

Downstream 100 bases:

>100_bases
AATTTCCAATAAGATTTTTAAGATGGGGTGAAATTCCAGGGGAAAGCTGGGTATTACTCAGGATGGAAGAGGAATTTGAC
TCATATTAGCATAAACCACT

Product: phage repressor

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Repressor Domain-Containing Protein; Prophage Repressor CI-Like; LexA Repressor; Prophage Repressor

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MSIREKIGKRIHEARKAKGLTRQALADLTDDIKPSRINNWEHGTRMPGPEEITQLAQALEVSPSFLMGLSDERDGDFGIN
SRVGSLIPLLDHKQAGDPKYHIQRVKEEPYAEKITFLPVNQDIANQLDEYAFALKMLDDSMSPELRINDIQIVDPSISPN
PGDFVVVKISGKDDVIICQYKKISYTSSEFELLTLNDNWPNITFNESEQVEIVGTVIQNIRTYRR

Sequences:

>Translated_225_residues
MSIREKIGKRIHEARKAKGLTRQALADLTDDIKPSRINNWEHGTRMPGPEEITQLAQALEVSPSFLMGLSDERDGDFGIN
SRVGSLIPLLDHKQAGDPKYHIQRVKEEPYAEKITFLPVNQDIANQLDEYAFALKMLDDSMSPELRINDIQIVDPSISPN
PGDFVVVKISGKDDVIICQYKKISYTSSEFELLTLNDNWPNITFNESEQVEIVGTVIQNIRTYRR
>Mature_224_residues
SIREKIGKRIHEARKAKGLTRQALADLTDDIKPSRINNWEHGTRMPGPEEITQLAQALEVSPSFLMGLSDERDGDFGINS
RVGSLIPLLDHKQAGDPKYHIQRVKEEPYAEKITFLPVNQDIANQLDEYAFALKMLDDSMSPELRINDIQIVDPSISPNP
GDFVVVKISGKDDVIICQYKKISYTSSEFELLTLNDNWPNITFNESEQVEIVGTVIQNIRTYRR

Specific function: Unknown

COG id: COG1974

COG function: function code KT; SOS-response transcriptional repressors (RecA-mediated autopeptidases)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25540; Mature: 25409

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIREKIGKRIHEARKAKGLTRQALADLTDDIKPSRINNWEHGTRMPGPEEITQLAQALE
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
VSPSFLMGLSDERDGDFGINSRVGSLIPLLDHKQAGDPKYHIQRVKEEPYAEKITFLPVN
CCCHHEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHEEEEEECC
QDIANQLDEYAFALKMLDDSMSPELRINDIQIVDPSISPNPGDFVVVKISGKDDVIICQY
HHHHHHHHHHHHHHHHHHCCCCCCEEECEEEEECCCCCCCCCCEEEEEECCCCCEEEEEE
KKISYTSSEFELLTLNDNWPNITFNESEQVEIVGTVIQNIRTYRR
EECEECCCCEEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SIREKIGKRIHEARKAKGLTRQALADLTDDIKPSRINNWEHGTRMPGPEEITQLAQALE
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
VSPSFLMGLSDERDGDFGINSRVGSLIPLLDHKQAGDPKYHIQRVKEEPYAEKITFLPVN
CCCHHEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHEEEEEECC
QDIANQLDEYAFALKMLDDSMSPELRINDIQIVDPSISPNPGDFVVVKISGKDDVIICQY
HHHHHHHHHHHHHHHHHHCCCCCCEEECEEEEECCCCCCCCCCEEEEEECCCCCEEEEEE
KKISYTSSEFELLTLNDNWPNITFNESEQVEIVGTVIQNIRTYRR
EECEECCCCEEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA