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The map label for this gene is 52842724

Identifier: 52842724

GI number: 52842724

Start: 2843865

End: 2845130

Strand: Reverse

Name: 52842724

Synonym: lpg2516

Alternate gene names: NA

Gene position: 2845130-2843865 (Counterclockwise)

Preceding gene: 52842728

Following gene: 52842723

Centisome position: 83.74

GC content: 39.57

Gene sequence:

>1266_bases
GTGGTCTTTTTATTTTCTTTTCCGAGGGTGATTATGTCTGTTTCACGAGTTACAGCGTGGTTTGTGTGGGTCATAGTATC
CATATTTTACGCATATCAATATGTTCTGAGAGTTATGCCCAATATTATGCTGGATGATATTACTCAGCAATTTCACATTG
ATGCCATAATTTTTGGGCAATTTTCCGGTATTTATTACATTGGTTATTCTTTGATGCACTTGCCTATTGGGATTATGCTC
GATCGTTTTGGCCCAAGAAAAGTGATGACAGGATGCATCATGTTGACCGTGATAGGTTTACTTCCCATTTTGTTTGCTGA
AAATTGGGTTTATCCAGTGATAGGAAGAGCCCTGATTGGTATAGGTTCATCGGCTGCCATTTTAGGAACATTTAAAATAA
TCCGCATGACTTTTAAGGAGAAACATTTTCCAAGGATGCTGAGCTTTTCAGTCATGATAGGACTTGTTGGCGCGGTATAT
GGCGGCGGTCCTGTCAGTTACATGTGTCAACTTATGGGTTATAAAATGGTGGTGGAAATATTTGTAGGCATAGGAATAGT
GCTGGCTGGTATTACCTATCTAATTGTTCCCGATGCACAGCCTTCTCGCCAGGATAGTGTGATTTCTAATATCAGAATGG
TTTTTGGTAATAGTAAAGTGATCCTATTGTGTTGTTTTGCGGGATTGATGTTGGGACCACTGGAAGGTTTTTCTGATGTA
TGGGGCTCTGGCTTTTTAAAAATGGCATACAGTTTGAATGCCAACGCGGCAAATTATCTTCCATCAATGATTTATATTGG
CATGTGTTTTGGCGCACCTATCTTAAGTCTGATTGCAGAAAAAACAGGGTATTATCTTGGAACTATCATCGCATCAGGCG
TGGTTATGTTTCTGGTATTTGCTATGCTTGTCGGAGGTGTTCTGACTATTCCCAGTATAACAATAAGTTTTATCCTGGTT
GGCATTTGTTGCTCTTATCAAATTTTGGCTATTTATAAAGTATCCACTTATGTCCCCGATAATCTTGCAGGGTTAACTAC
TGCAATTGCGAATATGATTATTATGATTTTTGGGTATGGTTTTCATTCTGTAATTGGTTATGTCGTCAATATGTATGGGG
GGACACATGTAGCTCGCGCTTTTGTTTATGGAGTTGGGGTGATTCCTTTGACATTGGCTGTTGGCGTGGTGGGTTTTTTG
TTTCTGGCCTATCAAGAGAAAAATTTTACCCCGGATGCTTCCTTTGCCTCTCCTGAATTACGATAA

Upstream 100 bases:

>100_bases
ATTAGAATTTAAAATCAAAAAAAAGGGTTTTATTTTGTTTTTTGCAATCCAATTTCAAGGGAAGTAAGATAAAATACTTT
ATGATAATTATTTAATCCTA

Downstream 100 bases:

>100_bases
TTACTGGCATTTCTATCTTGTGTGGTAATAAATATCAAGGGAGGTATAGCTATCATGTATATGTTGTATTTTCATGTTCC
AGAAACTCATCTTGACGAAG

Product: major facilitator family transporter

Products: NA

Alternate protein names: Facilitator Family Transporter; Facilitator Superfamily Transporter; Facilitator Superfamily Protein; Permease; Facilitator Superfamily Permease; Transporter MFS Superfamily; Sugar Phosphate Permease; Sugar Transporter; Facilitator Family Transporter Transporter; Facilitator Superfamily Sugar Transporter; Bicyclomycin Resistance Protein; Facilitator Protein; Facilitator Membrane Proteins; Facilitator Family Oxalate/Formate Antiporter; Facilitator Family Hexuronate Transporter; Intraphagosomal Amino Acid Transporter Family Protein; Sugar Transport Family Protein; Transport Proteins; MFS Family Transporter; Multidrug ABC Transporter; Facilitator Family Protein; NasA Protein

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MVFLFSFPRVIMSVSRVTAWFVWVIVSIFYAYQYVLRVMPNIMLDDITQQFHIDAIIFGQFSGIYYIGYSLMHLPIGIML
DRFGPRKVMTGCIMLTVIGLLPILFAENWVYPVIGRALIGIGSSAAILGTFKIIRMTFKEKHFPRMLSFSVMIGLVGAVY
GGGPVSYMCQLMGYKMVVEIFVGIGIVLAGITYLIVPDAQPSRQDSVISNIRMVFGNSKVILLCCFAGLMLGPLEGFSDV
WGSGFLKMAYSLNANAANYLPSMIYIGMCFGAPILSLIAEKTGYYLGTIIASGVVMFLVFAMLVGGVLTIPSITISFILV
GICCSYQILAIYKVSTYVPDNLAGLTTAIANMIIMIFGYGFHSVIGYVVNMYGGTHVARAFVYGVGVIPLTLAVGVVGFL
FLAYQEKNFTPDASFASPELR

Sequences:

>Translated_421_residues
MVFLFSFPRVIMSVSRVTAWFVWVIVSIFYAYQYVLRVMPNIMLDDITQQFHIDAIIFGQFSGIYYIGYSLMHLPIGIML
DRFGPRKVMTGCIMLTVIGLLPILFAENWVYPVIGRALIGIGSSAAILGTFKIIRMTFKEKHFPRMLSFSVMIGLVGAVY
GGGPVSYMCQLMGYKMVVEIFVGIGIVLAGITYLIVPDAQPSRQDSVISNIRMVFGNSKVILLCCFAGLMLGPLEGFSDV
WGSGFLKMAYSLNANAANYLPSMIYIGMCFGAPILSLIAEKTGYYLGTIIASGVVMFLVFAMLVGGVLTIPSITISFILV
GICCSYQILAIYKVSTYVPDNLAGLTTAIANMIIMIFGYGFHSVIGYVVNMYGGTHVARAFVYGVGVIPLTLAVGVVGFL
FLAYQEKNFTPDASFASPELR
>Mature_421_residues
MVFLFSFPRVIMSVSRVTAWFVWVIVSIFYAYQYVLRVMPNIMLDDITQQFHIDAIIFGQFSGIYYIGYSLMHLPIGIML
DRFGPRKVMTGCIMLTVIGLLPILFAENWVYPVIGRALIGIGSSAAILGTFKIIRMTFKEKHFPRMLSFSVMIGLVGAVY
GGGPVSYMCQLMGYKMVVEIFVGIGIVLAGITYLIVPDAQPSRQDSVISNIRMVFGNSKVILLCCFAGLMLGPLEGFSDV
WGSGFLKMAYSLNANAANYLPSMIYIGMCFGAPILSLIAEKTGYYLGTIIASGVVMFLVFAMLVGGVLTIPSITISFILV
GICCSYQILAIYKVSTYVPDNLAGLTTAIANMIIMIFGYGFHSVIGYVVNMYGGTHVARAFVYGVGVIPLTLAVGVVGFL
FLAYQEKNFTPDASFASPELR

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46065; Mature: 46065

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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C
>Mature Secondary Structure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C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA