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The map label for this gene is 52842717

Identifier: 52842717

GI number: 52842717

Start: 2829940

End: 2831133

Strand: Reverse

Name: 52842717

Synonym: lpg2509

Alternate gene names: NA

Gene position: 2831133-2829940 (Counterclockwise)

Preceding gene: 52842720

Following gene: 52842716

Centisome position: 83.32

GC content: 41.54

Gene sequence:

>1194_bases
TTGTTATATAATAAATCCTCATTTTGTTTATGGAAGGAGACCATTGTGCCTATTATTCTAGATTCTGATGTGTTGGAAGT
GGCGGAATATGTGTATAAAACACGCTTATCTCAGCCTTACACTGAAGTGGGTTCTGAATGGGAGTATAATTACAAGAATC
CAACAGCCACTTTTGCAAAAGGCGATGGCCATAACTTGCAAAGGTATATTACAATTGATGGCAAGCAGCTTCATCGCCCT
ATCCATGGGTTAGCTCATACGATGCGCACATTGATGTATAGCCAATTGATGTATTGCTCCTCAAAAAAACAACCTTCCCC
ACACGTATGTCAAGACGGACGAACAATAGCCGATCTCAGTGAACTTGATCTTAAAAAGATAAACATTGCGCAGCTATTTT
TTGTAGCCGGGCGCGAAAGCGAGGCTTCTTATGGTGATGCTTATCATCGTTATCATCTGTATGGGGCTAAACAGTTCGAA
GAATATGCCCGCAAGCATTTGACTCATCTTTTTTCAGAAGAAGAAATCCGATTGTACTCACGATGTATAGAAGACAGGGT
AGGTGACAGTTTTGATGGTACCCCTGAAGGTTATATAATTCACTTGTCACACATGATCGATTTGATGCGTTGCAAAAGCC
CGGTTGAAGTATTTTTGGGCCACTCAAAAGGGGTTTCTGGTATTGTACCTACATTGATTCACTTGTTTGGCAAACAAGAT
GGCTTGGATATTATGCATTACGCCCGAGGCTTGTTTGCGGCTACAGGTGAGGCGGTGCCCTATATTGATTCATCTGAATG
GCCTCATTTGGGAGTTGACTTGAGTCGGGTACAACGCGCACTCTCTATCGTTGGTGATATCAATGTCCCTGGGCAAGAGG
CTGATTCTAAAAAAACAGCGCAAGCCGGTTTTTCTGTGGATGGTTGTTATTCTGCGTTAACCAGTGTGCCTACACCTTCC
TGGTATGAGAAAGAGTTAAAAGAAATCGATGATGAAAAAATCGATGTTAAGGAAGTTGATGATAGGGAGATAGAAAAAGA
ACATGAGATAGTTGTTCCTTCGCAGGCAACAACACCTTTAAGTACAGTAAAAACTGACTCCTTTGTCGAAAAACTTCTGA
AGCCATTTATGATTTGGAAAAAGCCAGAGGTACAAACGACTCAACCAACAACGGAGAAGACTAATAAACCTTAG

Upstream 100 bases:

>100_bases
CAATTTGAGTTATCTAAAACAATCGAATATGAGATTTTCGATTAAATCATTGCGATTTTTTGAGTTATGCCTACCGCAAT
GAATTGATAAATAATTACAC

Downstream 100 bases:

>100_bases
CCTGTTTTATTTAAAGTAATAGAGAAACGGATTCACTTAGGGAATTAAAACGCAATGAGGTGTTGTAACTATGTTTAGTT
ATCTGGATAAATTATTAGAT

Product: SdeD

Products: NA

Alternate protein names: Sid Related Protein-Like; Sid -Like Protein; SdeC Protein; Sid Proteins; SdeA Protein; SidE Protein

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MLYNKSSFCLWKETIVPIILDSDVLEVAEYVYKTRLSQPYTEVGSEWEYNYKNPTATFAKGDGHNLQRYITIDGKQLHRP
IHGLAHTMRTLMYSQLMYCSSKKQPSPHVCQDGRTIADLSELDLKKINIAQLFFVAGRESEASYGDAYHRYHLYGAKQFE
EYARKHLTHLFSEEEIRLYSRCIEDRVGDSFDGTPEGYIIHLSHMIDLMRCKSPVEVFLGHSKGVSGIVPTLIHLFGKQD
GLDIMHYARGLFAATGEAVPYIDSSEWPHLGVDLSRVQRALSIVGDINVPGQEADSKKTAQAGFSVDGCYSALTSVPTPS
WYEKELKEIDDEKIDVKEVDDREIEKEHEIVVPSQATTPLSTVKTDSFVEKLLKPFMIWKKPEVQTTQPTTEKTNKP

Sequences:

>Translated_397_residues
MLYNKSSFCLWKETIVPIILDSDVLEVAEYVYKTRLSQPYTEVGSEWEYNYKNPTATFAKGDGHNLQRYITIDGKQLHRP
IHGLAHTMRTLMYSQLMYCSSKKQPSPHVCQDGRTIADLSELDLKKINIAQLFFVAGRESEASYGDAYHRYHLYGAKQFE
EYARKHLTHLFSEEEIRLYSRCIEDRVGDSFDGTPEGYIIHLSHMIDLMRCKSPVEVFLGHSKGVSGIVPTLIHLFGKQD
GLDIMHYARGLFAATGEAVPYIDSSEWPHLGVDLSRVQRALSIVGDINVPGQEADSKKTAQAGFSVDGCYSALTSVPTPS
WYEKELKEIDDEKIDVKEVDDREIEKEHEIVVPSQATTPLSTVKTDSFVEKLLKPFMIWKKPEVQTTQPTTEKTNKP
>Mature_397_residues
MLYNKSSFCLWKETIVPIILDSDVLEVAEYVYKTRLSQPYTEVGSEWEYNYKNPTATFAKGDGHNLQRYITIDGKQLHRP
IHGLAHTMRTLMYSQLMYCSSKKQPSPHVCQDGRTIADLSELDLKKINIAQLFFVAGRESEASYGDAYHRYHLYGAKQFE
EYARKHLTHLFSEEEIRLYSRCIEDRVGDSFDGTPEGYIIHLSHMIDLMRCKSPVEVFLGHSKGVSGIVPTLIHLFGKQD
GLDIMHYARGLFAATGEAVPYIDSSEWPHLGVDLSRVQRALSIVGDINVPGQEADSKKTAQAGFSVDGCYSALTSVPTPS
WYEKELKEIDDEKIDVKEVDDREIEKEHEIVVPSQATTPLSTVKTDSFVEKLLKPFMIWKKPEVQTTQPTTEKTNKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45107; Mature: 45107

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYNKSSFCLWKETIVPIILDSDVLEVAEYVYKTRLSQPYTEVGSEWEYNYKNPTATFAK
CCCCCCCCEEECCCCEEEEECCHHHHHHHHHHHHHCCCCHHHCCCCCEECCCCCCCEEEC
GDGHNLQRYITIDGKQLHRPIHGLAHTMRTLMYSQLMYCSSKKQPSPHVCQDGRTIADLS
CCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHH
ELDLKKINIAQLFFVAGRESEASYGDAYHRYHLYGAKQFEEYARKHLTHLFSEEEIRLYS
HHHHHHCCHHHEEEEECCCCCCCCCCHHHHEEECCHHHHHHHHHHHHHHHHCHHHHHHHH
RCIEDRVGDSFDGTPEGYIIHLSHMIDLMRCKSPVEVFLGHSKGVSGIVPTLIHLFGKQD
HHHHHHCCCCCCCCCCCEEEEHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHCCCC
GLDIMHYARGLFAATGEAVPYIDSSEWPHLGVDLSRVQRALSIVGDINVPGQEADSKKTA
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHH
QAGFSVDGCYSALTSVPTPSWYEKELKEIDDEKIDVKEVDDREIEKEHEIVVPSQATTPL
HCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHCCCCEECCCCCCCCH
STVKTDSFVEKLLKPFMIWKKPEVQTTQPTTEKTNKP
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLYNKSSFCLWKETIVPIILDSDVLEVAEYVYKTRLSQPYTEVGSEWEYNYKNPTATFAK
CCCCCCCCEEECCCCEEEEECCHHHHHHHHHHHHHCCCCHHHCCCCCEECCCCCCCEEEC
GDGHNLQRYITIDGKQLHRPIHGLAHTMRTLMYSQLMYCSSKKQPSPHVCQDGRTIADLS
CCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHH
ELDLKKINIAQLFFVAGRESEASYGDAYHRYHLYGAKQFEEYARKHLTHLFSEEEIRLYS
HHHHHHCCHHHEEEEECCCCCCCCCCHHHHEEECCHHHHHHHHHHHHHHHHCHHHHHHHH
RCIEDRVGDSFDGTPEGYIIHLSHMIDLMRCKSPVEVFLGHSKGVSGIVPTLIHLFGKQD
HHHHHHCCCCCCCCCCCEEEEHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHCCCC
GLDIMHYARGLFAATGEAVPYIDSSEWPHLGVDLSRVQRALSIVGDINVPGQEADSKKTA
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHH
QAGFSVDGCYSALTSVPTPSWYEKELKEIDDEKIDVKEVDDREIEKEHEIVVPSQATTPL
HCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHCCCCEECCCCCCCCH
STVKTDSFVEKLLKPFMIWKKPEVQTTQPTTEKTNKP
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA