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The map label for this gene is vhtD

Identifier: 52842674

GI number: 52842674

Start: 2780889

End: 2781368

Strand: Reverse

Name: vhtD

Synonym: lpg2466

Alternate gene names: NA

Gene position: 2781368-2780889 (Counterclockwise)

Preceding gene: 52842675

Following gene: 52842672

Centisome position: 81.86

GC content: 36.25

Gene sequence:

>480_bases
ATGAATCTTATAAAAATATTAGGCATAGGCTCACCTTTTGGTGATGATCAAGTAGGATATTTGCTTGCCGATTGTCTTAA
GACAGAATTGTCCAAAGATCAATACATTAGTAAACTGGTGAGCATAGAGTCTCACGATCGGCCTGGTCTTCGTTTGATTG
AAGTGATGAATCCAGCCAAAGTCGTTTTTTTAATTGATGCTGTAAAGTCCGGATGCGCCATAGGTACAATCCATCGCTTA
AAAAATAACGAGATTTTTGCATTTCAAAATAGATTATCGACCCATGAAATAGGGGTTGTAGAAGCACTACAAATAGGTCA
AAGTCTTAATGCTTTGCCAGAGGATATCATTTTATACGGGATTGAAATTGATAGCATTGCTTTTAATGCGACGCTGTCCA
AATCAGTTGAAAAAGCAATGAAGGTCGTTGTTATCCAAATAAAAAAGGAACTCAAGGATATGTTAAATCATATCGTATGA

Upstream 100 bases:

>100_bases
AGGAAGAAGCGATCAGGTATTTTAGTGAGATGATCATTCGTAATTATGATCCGTGTATTTCATGCTCTACACATTTTCTG
AATTTAAAAATCGATAGAAT

Downstream 100 bases:

>100_bases
GTTTCTTTTCATAATGAACTTATAATACTTAAATAGTAAGACTCGAGTTAGTTGCAGCCTTAATTTTATCTGCAGTCCAA
AGGTTTAGCGTTGAATGAAT

Product: hydrogenase expression/formation protein

Products: NA

Alternate protein names: Hydrogenase Expression/Formation Protein; Peptidase; VhtD Hydrogenase Expression/Formation Protein

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MNLIKILGIGSPFGDDQVGYLLADCLKTELSKDQYISKLVSIESHDRPGLRLIEVMNPAKVVFLIDAVKSGCAIGTIHRL
KNNEIFAFQNRLSTHEIGVVEALQIGQSLNALPEDIILYGIEIDSIAFNATLSKSVEKAMKVVVIQIKKELKDMLNHIV

Sequences:

>Translated_159_residues
MNLIKILGIGSPFGDDQVGYLLADCLKTELSKDQYISKLVSIESHDRPGLRLIEVMNPAKVVFLIDAVKSGCAIGTIHRL
KNNEIFAFQNRLSTHEIGVVEALQIGQSLNALPEDIILYGIEIDSIAFNATLSKSVEKAMKVVVIQIKKELKDMLNHIV
>Mature_159_residues
MNLIKILGIGSPFGDDQVGYLLADCLKTELSKDQYISKLVSIESHDRPGLRLIEVMNPAKVVFLIDAVKSGCAIGTIHRL
KNNEIFAFQNRLSTHEIGVVEALQIGQSLNALPEDIILYGIEIDSIAFNATLSKSVEKAMKVVVIQIKKELKDMLNHIV

Specific function: Unknown

COG id: COG0680

COG function: function code C; Ni,Fe-hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17557; Mature: 17557

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLIKILGIGSPFGDDQVGYLLADCLKTELSKDQYISKLVSIESHDRPGLRLIEVMNPAK
CCEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEECCCCE
VVFLIDAVKSGCAIGTIHRLKNNEIFAFQNRLSTHEIGVVEALQIGQSLNALPEDIILYG
EEEEEEHHHCCCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEE
IEIDSIAFNATLSKSVEKAMKVVVIQIKKELKDMLNHIV
EEECCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLIKILGIGSPFGDDQVGYLLADCLKTELSKDQYISKLVSIESHDRPGLRLIEVMNPAK
CCEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEECCCCE
VVFLIDAVKSGCAIGTIHRLKNNEIFAFQNRLSTHEIGVVEALQIGQSLNALPEDIILYG
EEEEEEHHHCCCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEE
IEIDSIAFNATLSKSVEKAMKVVVIQIKKELKDMLNHIV
EEECCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA