Click here to switch to the map view.

The map label for this gene is csrA-2

Identifier: 52841237

GI number: 52841237

Start: 1092431

End: 1092631

Strand: Reverse

Name: csrA-2

Synonym: lpg1003

Alternate gene names: 52841237

Gene position: 1092631-1092431 (Counterclockwise)

Preceding gene: 52841238

Following gene: 52841236

Centisome position: 32.16

GC content: 35.82

Gene sequence:

>201_bases
ATGCTGATCCTAGACCGCAAAATTGGTGAAGAAATCTATATCAATAAAGGCAAAATCAAAATCACTGTTCTTTATGAAAA
AAATGGCCTGATAGGAATTGGTGTCAGAGCACCCAGCGAAATCGATATCGATCGCAAAGAAGTCTTTATCCGCAAATACA
TTCAAAAATTAGACCAAGAAAACAAGTCAAATCAAGGATAG

Upstream 100 bases:

>100_bases
AACCCGAAAACCATAAAAGAACCGACCCACAAATCGTTAAATCCCACATCAAAGAGATGATGGAAAAGCTAACCAGTCCC
TCAGTTAAGGAGAAAAAATC

Downstream 100 bases:

>100_bases
GGATAGTTATGTTGAGAACAACCATTATTGGCCTTTTAGCCCTAAGCAGCCTGCAAATACAAGCTGCTAATATCACCCAG
GTTGGACGTTATGCTACCGT

Product: carbon storage regulator

Products: NA

Alternate protein names: Vir Region Protein

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MLILDRKIGEEIYINKGKIKITVLYEKNGLIGIGVRAPSEIDIDRKEVFIRKYIQKLDQENKSNQG

Sequences:

>Translated_66_residues
MLILDRKIGEEIYINKGKIKITVLYEKNGLIGIGVRAPSEIDIDRKEVFIRKYIQKLDQENKSNQG
>Mature_66_residues
MLILDRKIGEEIYINKGKIKITVLYEKNGLIGIGVRAPSEIDIDRKEVFIRKYIQKLDQENKSNQG

Specific function: Affects Glycogen Biosynthesis, Gluconeogenesis, Cell Size And Surface Properties. Regulates Glycogen Synthesis Under Both Aerobic And Anaerobic Conditions. Seems To Accelerate The Degradation Of Glg Gene Transcripts, Potentially Through Selective RNA Bind

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7647; Mature: 7647

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILDRKIGEEIYINKGKIKITVLYEKNGLIGIGVRAPSEIDIDRKEVFIRKYIQKLDQE
CEEECCCCCCEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCC
NKSNQG
CCCCCC
>Mature Secondary Structure
MLILDRKIGEEIYINKGKIKITVLYEKNGLIGIGVRAPSEIDIDRKEVFIRKYIQKLDQE
CEEECCCCCCEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCC
NKSNQG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA